Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
cran: Interact
Tests for marginal interactions in a 2 class response modelPapers that mentioned: 39
cran: DAMOCLES
Dynamic Assembly Model of Colonization, Local Extinction and SpeciationPapers that mentioned: 39
pypi: Rest
Rest is a rest client for python that makes it easy to make authenticated rest calls.Papers that mentioned: 39
pypi: jupyter
Jupyter metapackage. Install all the Jupyter components in one go.Papers that mentioned: 39
bioconductor: KEGGgraph
KEGGgraph: A graph approach to KEGG PATHWAY in R and BioconductorPapers that mentioned: 39
cran: runjags
Interface Utilities, Model Templates, Parallel Computing Methods and Additional Distributions for MCMC Models in JAGSPapers that mentioned: 39
cran: nFactors
Parallel Analysis and Other Non Graphical Solutions to the Cattell Scree TestPapers that mentioned: 39
pypi: lifelines
Survival analysis in Python, including Kaplan Meier, Nelson Aalen and regressionPapers that mentioned: 39
pypi: GenDoc
Generate a Markdown Documentation file from a Python Repository with DocStrings.Papers that mentioned: 39
pypi: LDpred
A Python package that adjusts GWAS summary statistics for the effects of linkage disequilibrium (LD)Papers that mentioned: 38
pypi: imbalanced-learn
Toolbox for imbalanced dataset in machine learning.Papers that mentioned: 38
pypi: Poly
rapid development of embarrassingly parallelizable applicationsPapers that mentioned: 38
bioconductor: AgiMicroRna
Processing and Differential Expression Analysis of Agilent microRNA chipsPapers that mentioned: 37
pypi: Dovetail
A light-weight, multi-platform, build tool for Python with Continuous Integration servers like Jenkins in mind.Papers that mentioned: 37
cran: epidata
Tools to Retrieve Economic Policy Institute Data Library ExtractsPapers that mentioned: 37
cran: mapping
Automatic Download, Linking, Manipulating Coordinates for MapsPapers that mentioned: 37
pypi: multiqc
Create aggregate bioinformatics analysis reports across many samples and toolsPapers that mentioned: 37
bioconductor: affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChipsPapers that mentioned: 36
cran: fastcluster
Fast Hierarchical Clustering Routines for R and 'Python'Papers that mentioned: 36
bioconductor: PING
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read DataPapers that mentioned: 36
pypi: Minerva
Robust Comet server and client built on Twisted and Closure LibraryPapers that mentioned: 36
pypi: RO
Collection of utilities including general algorithms, astronomical transformations and Tkinter widgetsPapers that mentioned: 36
pypi: gff3
Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files.Papers that mentioned: 36