Data

Tools

Indexes

Applications

Experiments

Papers

pypi: lifelines
Survival analysis in Python, including Kaplan Meier, Nelson Aalen and regression
Papers that mentioned: 39
Very Likely Science (100)
pypi: docker
A Python library for the Docker Engine API.
Papers that mentioned: 39
Very Likely Science (100)
pypi: Matador
Change management for Agresso systems
Papers that mentioned: 39
Very Likely Science (65)
pypi: EPANET
EPANET 2.0 calls from python
Papers that mentioned: 39
Very Likely Science (80)
bioconductor: ChemmineR
Cheminformatics Toolkit for R
Papers that mentioned: 39
Very Likely Science (100)
pypi: quast
Genome assembly evaluation tool
Papers that mentioned: 39
Very Likely Science (80)
pypi: Rest
Rest is a rest client for python that makes it easy to make authenticated rest calls.
Papers that mentioned: 39
Very Likely Science (65)
cran: sommer
Solving Mixed Model Equations in R
Papers that mentioned: 39
Very Likely Science (75)
pypi: Ginkgo
Lightweight service framework
Papers that mentioned: 39
Very Likely Science (65)
pypi: it
Modern python code review tool / framework
Papers that mentioned: 39
Very Likely Science (65)
cran: broom
Convert Statistical Objects into Tidy Tibbles
Papers that mentioned: 39
Very Likely Science (100)
pypi: q
Quick-and-dirty debugging output for tired programmers
Papers that mentioned: 39
Very Likely Science (65)
pypi: Arpeggio
Packrat parser interpreter
Papers that mentioned: 39
Likely Science (55)
cran: DAMOCLES
Dynamic Assembly Model of Colonization, Local Extinction and Speciation
Papers that mentioned: 39
Very Likely Science (75)
cran: SI
Stochastic Integrating
Papers that mentioned: 39
Very Likely Science (75)
pypi: to
A trainer for PyTorch
Papers that mentioned: 39
Very Likely Science (65)
pypi: star
import star
Papers that mentioned: 39
Very Likely Science (90)
pypi: wordcloud
A little word cloud generator
Papers that mentioned: 39
Very Likely Science (100)
cran: ADP
Adoption Probability, Triers and Users Rate of a New Product
Papers that mentioned: 39
Very Likely Science (80)
cran: Interact
Tests for marginal interactions in a 2 class response model
Papers that mentioned: 39
Very Likely Science (75)
pypi: GenDoc
Generate a Markdown Documentation file from a Python Repository with DocStrings.
Papers that mentioned: 39
Very Likely Science (65)
cran: glasso
Graphical Lasso: Estimation of Gaussian Graphical Models
Papers that mentioned: 39
Very Likely Science (83)
cran: compositions
Compositional Data Analysis
Papers that mentioned: 39
Very Likely Science (85)
cran: RCA
Relational Class Analysis
Papers that mentioned: 39
Very Likely Science (93)
cran: pavo
Perceptual Analysis, Visualization and Organization of Spectral Colour Data
Papers that mentioned: 39
Very Likely Science (100)
cran: nFactors
Parallel Analysis and Other Non Graphical Solutions to the Cattell Scree Test
Papers that mentioned: 39
Very Likely Science (85)
cran: patchwork
The Composer of Plots
Papers that mentioned: 38
Very Likely Science (95)
pypi: RapidSMS
Build SMS applications with Python and Django
Papers that mentioned: 38
Very Likely Science (65)
cran: TraMineR
Trajectory Miner: a Sequence Analysis Toolkit
Papers that mentioned: 38
Very Likely Science (85)
pypi: Poly
rapid development of embarrassingly parallelizable applications
Papers that mentioned: 38
Very Likely Science (80)
cran: BRugs
Interface to the 'OpenBUGS' MCMC Software
Papers that mentioned: 38
Very Likely Science (75)
pypi: spm1d
One-Dimensional Statistical Parametric Mapping
Papers that mentioned: 38
Very Likely Science (100)
pypi: SQLAlchemy
Database Abstraction Library
Papers that mentioned: 38
Very Likely Science (65)
pypi: Snake
Snake is yet another Make-like tool inspired by Rake.
Papers that mentioned: 38
Very Likely Science (65)
pypi: imbalanced-learn
Toolbox for imbalanced dataset in machine learning.
Papers that mentioned: 38
Very Likely Science (100)
cran: Snake
Game of Snake
Papers that mentioned: 38
Likely Science (50)
cran: rmarkdown
Dynamic Documents for R
Papers that mentioned: 38
Very Likely Science (100)
pypi: LDpred
A Python package that adjusts GWAS summary statistics for the effects of linkage disequilibrium (LD)
Papers that mentioned: 38
Very Likely Science (90)
pypi: elastic
Extension for ASE to calculate elastic constants
Papers that mentioned: 38
Very Likely Science (90)
bioconductor: bsseq
Analyze, manage and store bisulfite sequencing data
Papers that mentioned: 38
Very Likely Science (100)
pypi: patchwork
Deployment/sysadmin operations, powered by Fabric
Papers that mentioned: 38
Very Likely Science (65)
cran: TT
Display Tree Structured Data using Datatable Widget (DT)
Papers that mentioned: 38
Very Likely Science (75)
pypi: CRF
Conditional Random Fields for Vision and Language
Papers that mentioned: 38
Very Likely Science (65)
cran: PCS
Calculate the Probability of Correct Selection (PCS)
Papers that mentioned: 38
Very Likely Science (83)
cran: CRF
Conditional Random Fields
Papers that mentioned: 38
Very Likely Science (99)
pypi: nilearn
Statistical learning for neuroimaging in Python
Papers that mentioned: 38
Very Likely Science (90)
cran: compute.es
Compute Effect Sizes
Papers that mentioned: 38
Very Likely Science (75)
cran: elastic
General Purpose Interface to 'Elasticsearch'
Papers that mentioned: 38
Very Likely Science (100)
cran: neuralnet
Training of Neural Networks
Papers that mentioned: 37
Very Likely Science (100)
pypi: heatmapper
Python library for creating heatmap
Papers that mentioned: 37
Very Likely Science (65)
cran: mapping
Automatic Download, Linking, Manipulating Coordinates for Maps
Papers that mentioned: 37
Very Likely Science (77)
bioconductor: MLP
Mean Log P Analysis
Papers that mentioned: 37
Very Likely Science (100)
pypi: Dovetail
A light-weight, multi-platform, build tool for Python with Continuous Integration servers like Jenkins in mind.
Papers that mentioned: 37
Very Likely Science (65)
pypi: application
Papers that mentioned: 37
Very Likely Science (65)
bioconductor: AgiMicroRna
Processing and Differential Expression Analysis of Agilent microRNA chips
Papers that mentioned: 37
Very Likely Science (100)
pypi: o
Get operator information.
Papers that mentioned: 37
Very Likely Science (65)
bioconductor: CATALYST
Cytometry dATa anALYSis Tools
Papers that mentioned: 37
Very Likely Science (100)
pypi: mapping
Mappings for generic and tradeable futures instruments
Papers that mentioned: 37
Very Likely Science (65)
cran: epidata
Tools to Retrieve Economic Policy Institute Data Library Extracts
Papers that mentioned: 37
Very Likely Science (75)
pypi: mcl
Python wrapper for mcl library
Papers that mentioned: 37
Very Likely Science (85)
cran: amap
Another Multidimensional Analysis Package
Papers that mentioned: 37
Very Likely Science (85)
pypi: Augur
Papers that mentioned: 37
Very Likely Science (65)
pypi: multiqc
Create aggregate bioinformatics analysis reports across many samples and tools
Papers that mentioned: 37
Very Likely Science (90)
pypi: neuralnet
A high-level library on top of Theano.
Papers that mentioned: 37
Very Likely Science (85)
cran: datos
Traduce al Español Varios Conjuntos de Datos de Práctica
Papers that mentioned: 37
Very Likely Science (74)
cran: epiDisplay
Epidemiological Data Display Package
Papers that mentioned: 37
Very Likely Science (83)
pypi: alpha
Alpha platform
Papers that mentioned: 37
Very Likely Science (65)
pypi: amap
Automated mouse atlas propagation
Papers that mentioned: 37
Very Likely Science (80)
pypi: p
Aliases any available project commands or scripts to `p <name>`.
Papers that mentioned: 37
Very Likely Science (65)
pypi: demux
Application for demultiplexing sequence data
Papers that mentioned: 37
Very Likely Science (65)
bioconductor: CGHcall
Calling aberrations for array CGH tumor profiles.
Papers that mentioned: 37
Very Likely Science (90)
pypi: ARS
Physically-accurate robotics simulator
Papers that mentioned: 37
Very Likely Science (80)
cran: networkD3
D3 JavaScript Network Graphs from R
Papers that mentioned: 37
Very Likely Science (85)
pypi: dPCA
Implements Demixed Principal Components Analysis
Papers that mentioned: 36
Very Likely Science (100)
cran: nose
nose Package for R
Papers that mentioned: 36
Very Likely Science (75)
bioconductor: SingleCellExperiment
S4 Classes for Single Cell Data
Papers that mentioned: 36
Very Likely Science (75)
pypi: fastcluster
Fast hierarchical clustering routines for R and Python.
Papers that mentioned: 36
Very Likely Science (80)
pypi: optim
Playground for optimizers.
Papers that mentioned: 36
Very Likely Science (65)
cran: RCurl
General Network (HTTP/FTP/...) Client Interface for R
Papers that mentioned: 36
Very Likely Science (85)
pypi: PyQt5
Python bindings for the Qt cross platform application toolkit
Papers that mentioned: 36
Very Likely Science (65)
pypi: RO
Collection of utilities including general algorithms, astronomical transformations and Tkinter widgets
Papers that mentioned: 36
Very Likely Science (75)
cran: jsonlite
A Simple and Robust JSON Parser and Generator for R
Papers that mentioned: 36
Very Likely Science (83)
pypi: nltk
Natural Language Toolkit
Papers that mentioned: 36
Very Likely Science (70)
bioconductor: Ringo
R Investigation of ChIP-chip Oligoarrays
Papers that mentioned: 36
Very Likely Science (90)
pypi: gff3
Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files.
Papers that mentioned: 36
Very Likely Science (85)
pypi: splits
A library for dealing with splittable files
Papers that mentioned: 36
Very Likely Science (80)
pypi: genome
Papers that mentioned: 36
Very Likely Science (65)
cran: rentrez
'Entrez' in R
Papers that mentioned: 36
Very Likely Science (75)
pypi: s
The almighty S-package
Papers that mentioned: 36
Very Likely Science (65)
pypi: sed
Streaming editor toolkit
Papers that mentioned: 36
Very Likely Science (65)
cran: ASMap
Linkage Map Construction using the MSTmap Algorithm
Papers that mentioned: 36
Very Likely Science (93)
bioconductor: affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
Papers that mentioned: 36
Very Likely Science (98)
bioconductor: PING
Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data
Papers that mentioned: 36
Very Likely Science (90)
cran: tseries
Time Series Analysis and Computational Finance
Papers that mentioned: 36
Very Likely Science (85)
cran: SimSeq
Nonparametric Simulation of RNA-Seq Data
Papers that mentioned: 36
Very Likely Science (85)
cran: fastcluster
Fast Hierarchical Clustering Routines for R and 'Python'
Papers that mentioned: 36
Very Likely Science (75)
bioconductor: annotate
Annotation for microarrays
Papers that mentioned: 36
Very Likely Science (100)
cran: adespatial
Multivariate Multiscale Spatial Analysis
Papers that mentioned: 36
Very Likely Science (100)
pypi: minet
A webmining CLI tool & library for python.
Papers that mentioned: 36
Very Likely Science (100)
pypi: annotate
Decorator to set a function's __annotations__ like Py3.
Papers that mentioned: 36
Very Likely Science (65)