pypi: wordcloud | Projects | Ecosyste.ms: Papers

10.12688/f1000research.17824.2

Enhancing gene set enrichment using networks
Cited by: 2
Author(s): Michael Prummer
Software Mentions: 51
Published: over 5 years ago

10.3390/cancers12040948

Reconstruction of Ewing Sarcoma Developmental Context from Mass-Scale Transcriptomics Reveals Characteristics of EWSR1-FLI1 Permissibility
Cited by: 23
Author(s): Henry E. Miller, Aparna Gorthi, Nicklas Bassani, Liesl A. Lawrence, Brian S. Iskra, Alexander J.R. Bishop
Software Mentions: 19
Published: over 4 years ago

10.31744/einstein_journal/2020AO6127

COVID-19 information exposure in digital media and implications for employees in the health care sector: findings from an online survey
Cited by: 7
Author(s): Paulo Rodrigo Bazán, Raymundo Machado de Azevedo Neto, Julia Abou Dias, Vanessa Gil Salvatierra, Liana Guerra Sanches, Sheylla Nadjane Batista Lacerda, Edson Amaro, Elisa Harumi Kozasa, Joana Bisol Balardin
Software Mentions: 17
Published: almost 5 years ago

10.2196/24889

A Novel Machine Learning Framework for Comparison of Viral COVID-19–Related Sina Weibo and Twitter Posts: Workflow Development and Content Analysis
Cited by: 7
Author(s): Shi Chen, Lina Zhou, Yunya Song, Qian Xu, Ping Wang, Kanlun Wang, Yaorong Ge, Daniel Janies
Software Mentions: 15
Published: almost 4 years ago

10.1186/s13073-020-00823-5

Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients
Cited by: 169
Author(s): Anna C. Aschenbrenner, Maria Mouktaroudi, Benjamin Krämer, Marie Oestreich, Nikolaos Antonakos, Melanie Nuesch-Germano, Konstantina Gkizeli, Lorenzo Bonaguro, Nico Reusch, Kevin Baßler, Maria Saridaki, Rainer Knoll, Tal Pecht, Theodore S. Kapellos, Sarandia Doulou, Charlotte Kröger, Miriam Herbert, Lisa Holsten, Arik Horne, Ioanna Gemünd, Nikoletta Rovina, Shobhit Agrawal, K. Dahm, Martina van Uelft, Anna Drews, Lena Lenkeit, Niklas Bruse, Jelle Gerretsen, Jannik Gierlich, Matthias Becker, Kristian Händler, Michael Kraut, Heidi Theis, Simachew Abebe Mengiste, Elena De Domenico, Jonas Schulte-Schrepping, Lea Seep, Jan Raabe, Christoph Hoffmeister, Michael ToVinh, Verena Keitel, Gereon J Rieke, Valentina Talevi, Dirk Skowasch, N. Ahmad Aziz, Peter Pickkers, Frank L. van de Veerdonk, Mihai G. Netea, Joachim L. Schultze, Matthijs Kox, Monique M.B. Breteler, Jacob Nattermann, Antonia Koutsoukou, Evangelos J. Giamarellos‐Bourboulis, Thomas Ulas
Software Mentions: 13
Published: almost 4 years ago

10.3389/fonc.2021.625207

MYCN Drives a Tumor Immunosuppressive Environment Which Impacts Survival in Neuroblastoma
Cited by: 18
Author(s): Salvatore Raieli, Daniele Di Renzo, Silvia Lampis, Camilla Amadesi, Luca Montemurro, Andrea Pession, Patrizia Hrelia, Matthias Fischer, Roberto Tonelli
Software Mentions: 12
Published: almost 4 years ago

10.7717/peerj.9494

Quantifying local ecological knowledge to model historical abundance of long-lived, heavily-exploited fauna
Cited by: 15
Author(s): Michelle María Early Capistrán, Elena Solana‐Arellano, F. Alberto Abreu‐Grobois, Nemer E. Narchi, Gerardo Garibay‐Melo, Jeffrey A. Seminoff, Volker Koch, Andrea Sáenz–Arroyo
Software Mentions: 11
Published: over 4 years ago

10.1016/j.eclinm.2021.101118

Unraveling the concepts of distress, burnout, and depression in type 1 diabetes: A scoping review
Cited by: 9
Author(s): Dona A. Kiriella, Sumaiya Islam, Olutobi Oridota, Nancy Sohler, Coralie Dessenne, Carine de Beaufort, Guy Fagherazzi, Gloria Aguayo
Software Mentions: 11
Published: about 3 years ago

10.1186/s12889-020-08923-y

Temporal and textual analysis of social media on collective discourses during the Zika virus pandemic
Cited by: 8
Author(s): May O. Lwin, Jiahui Lu, Anita Sheldenkar, Ysa Marie Cayabyab, Andrew Yee, Helen Smith
Software Mentions: 9
Published: over 4 years ago

10.3390/s19122772

Extracting Value from Industrial Alarms and Events: A Data-Driven Approach Based on Exploratory Data Analysis
Cited by: 16
Author(s): Aguinaldo Bezerra, Ivanovitch Silva, Luiz Affonso Guedes, Diego R. C. Silva, Gustavo Bezerra Paz Leitão, Kaku Saito
Software Mentions: 9
Published: over 5 years ago

10.3390/ani10061047

A Systematic Review Comparing Experimental Design of Animal and Human Methotrexate Efficacy Studies for Rheumatoid Arthritis: Lessons for the Translational Value of Animal Studies
Cited by: 8
Author(s): Cathalijn Leenaars, Frans Stafleu, David De Jong, Maikel van Berlo, Tijmen Geurts, Tineke Coenen-de Roo, Jan–Bas Prins, Rosalie W.M. Kempkes, Janneke Elzinga, André Bleich, Rob de Vries, F.L.B. Meijboom, Merel Ritskes‐Hoitinga
Software Mentions: 8
Published: over 4 years ago

10.1371/journal.pgen.1006883

Systematic identification and characterization of regulatory elements derived from human endogenous retroviruses
Cited by: 108
Author(s): Jumpei Ito, Ryota Sugimoto, Hirofumi Nakaoka, Shiro Yamada, Tetsuaki Kimura, Takahide Hayano, Ituro Inoue
Software Mentions: 8
Published: over 7 years ago

10.1038/s41598-020-73978-1

Data based predictive models for odor perception
Cited by: 27
Author(s): Rinu Chacko, Deepak Jain, Manasi Patwardhan, Abhishek Puri, Shirish Karande, Beena Rai
Software Mentions: 8
Published: about 4 years ago

10.2196/jmir.5144

Establishing a Link Between Prescription Drug Abuse and Illicit Online Pharmacies: Analysis of Twitter Data
Cited by: 82
Author(s): Takeo Katsuki, Tim K. Mackey, Raphael Cuomo
Software Mentions: 7
Published: about 9 years ago

10.1038/srep30794

Genome-wide Identification and Structural, Functional and Evolutionary Analysis of WRKY Components of Mulberry
Cited by: 33
Author(s): Vinay Kumar Baranwal, Nisha Negi, Paramjit Khurana
Software Mentions: 7
Published: over 8 years ago

10.1007/s11192-021-03962-7

Can tweets be used to detect problems early with scientific papers? A case study of three retracted COVID-19/SARS-CoV-2 papers
Cited by: 11
Author(s): Robin Haunschild, Lutz Bornmann
Software Mentions: 7
Published: over 3 years ago

10.1534/g3.118.200865

Draft Genome Assembly and Population Genetics of an Agricultural Pollinator, the Solitary Alkali Bee (Halictidae: <i>Nomia melanderi</i>)
Cited by: 16
Author(s): Karen M. Kapheim, Hailin Pan, Cai Li, Charles Blatti, Brock A. Harpur, Panagiotis Ioannidis, Beryl M. Jones, Clement F. Kent, Livio Ruzzante, Laura Sloofman, Eckart Stolle, Robert M. Waterhouse, Amro Zayed, Guojie Zhang, William T. Wcislo
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0245087

Anthropogenic landscape decreases mosquito biodiversity and drives malaria vector proliferation in the Amazon rainforest
Cited by: 16
Author(s): Leonardo Suveges Moreira Chaves, Eduardo Sterlino Bergo, Jan E. Conn, Gabriel Zorello Laporta, Paula Ribeiro Prist, Maria Anice Mureb Sallum
Software Mentions: 6
Published: almost 4 years ago

10.2196/18763

A Social Media–Promoted Educational Community of Joint Replacement Patients Using the WeChat App: Survey Study
Cited by: 10
Author(s): Xianzuo Zhang, Xiaoxuan Chen, Nikolaos Kourkoumelis, Ran Gao, Guoyuan Li, Chen Zhu
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pone.0251818

A systematic review of spatial habitat associations and modeling of marine fish distribution: A guide to predictors, methods, and knowledge gaps
Cited by: 13
Author(s): Bradley A. Pickens, Rachel Carroll, Michael J. Schirripa, Francesca C. Forrestal, Kevin D. Friedland, James C. Taylor
Software Mentions: 5
Published: over 3 years ago

10.3390/plants10040752

Genetic Diversity and Population Structure of Potato Germplasm in RDA-Genebank: Utilization for Breeding and Conservation
Cited by: 9
Author(s): Kyung-Jun Lee, Sebastin Raveendar, Gyu‐Taek Cho, Mun-Sup Yoon, Gi-An Lee, Do-Yoon Hyun
Software Mentions: 5
Published: over 3 years ago

10.1186/s13017-021-00389-6

Team dynamics in emergency surgery teams: results from a first international survey
Cited by: 18
Author(s): Lorenzo Cobianchi, Francesca Dal Mas, Maurizio Massaro, Paola Fugazzola, Federico Coccolini, Yoram Kluger, Ari Leppäniemi, Ernest E. Moore, Massimo Sartelli, Peter Angelos, Luca Ansaloni
Software Mentions: 5
Published: over 3 years ago

10.3389/fpsyg.2019.02154

Sport and Exercise Psychology Studies in Brazil: Performance or Health?
Cited by: 4
Author(s): Lenamar Fiorese Vieira, André Luíz Félix Rodacki, Nayara Malheiros Caruzzo, Caio Rosas Moreira, Andressa Ribeiro Contreira, Aline Mendes de Lima, Leonardo de Sousa Fortes, João Ricardo Nickenig Vissoci, Joice Mara Facco Stefanello
Software Mentions: 5
Published: about 5 years ago

10.1186/s12870-018-1467-2

WRKY transcription factors in legumes
Cited by: 51
Author(s): Hui Song, Weihong Sun, Guofeng Yang, Juan Sun
Software Mentions: 5
Published: about 6 years ago

10.3390/ijerph18041505

The Role of Societal Aspects in the Formation of Official COVID-19 Reports: A Data-Driven Analysis
Cited by: 5
Author(s): Marcell T. Kurbucz, Attila Imre Katona, Zoltán Lantos, Zsolt Tibor Kosztyán
Software Mentions: 5
Published: almost 4 years ago

10.2196/22427

Dissemination and Refutation of Rumors During the COVID-19 Outbreak in China: Infodemiology Study
Cited by: 21
Author(s): Bin Chen, Xinyi Chen, Jin Pan, Kui Liu, Bo Xie, Wei Wang, Ying Peng, Fei Wang, Na Li, Jianmin Jiang
Software Mentions: 4
Published: almost 4 years ago

10.1186/s12885-020-06931-0

Text mining in a literature review of urothelial cancer using topic model
Cited by: 11
Author(s): Hsuan-Jen Lin, Phillip C.-Y. Sheu, Jeffrey J. P. Tsai, Charles C.N. Wang, Che‐Yi Chou
Software Mentions: 4
Published: over 4 years ago

10.1038/s41597-021-01017-3

Chromosome-scale genome sequencing, assembly and annotation of six genomes from subfamily Leishmaniinae
Cited by: 5
Author(s): Hatim Almutairi, Michael D. Urbaniak, Michelle Bates, Narissara Jariyapan, Godwin Kwakye-Nuako, Vanete Thomaz Soccol, Waleed S. Al-Salem, Rod J. Dillon, Paul A. Bates, Derek Gatherer
Software Mentions: 4
Published: over 3 years ago

10.1093/jxb/ery147

Genomic comparison of two independent seagrass lineages reveals habitat-driven convergent evolution
Cited by: 24
Author(s): HueyTyng Lee, Agnieszka A. Golicz, Philipp E. Bayer, Anita A. Severn‐Ellis, Chon‐Kit Kenneth Chan, Jacqueline Batley, Gary A. Kendrick, David Edwards
Software Mentions: 4
Published: over 6 years ago

10.1097/MD.0000000000017504

Identification of genes related to mental disorders by text mining
Cited by: 6
Author(s): Ying Wu, Meilin Dang, Hongxia Li, Xing Jin, Wenxiao Yang
Software Mentions: 4
Published: about 5 years ago

10.2196/jmir.2653

Communicating Genetics and Smoking Through Social Media: Are We There Yet?
Cited by: 6
Author(s): Sylviane de Viron, L. Suzanne Suggs, Angela Brand, Herman Van Oyen
Software Mentions: 3
Published: over 11 years ago

10.3390/foods10020353

Chinese Consumers’ Attitudes and Potential Acceptance toward Artificial Meat
Cited by: 48
Author(s): Jingjing Liu, Élise Hocquette, Marie-Pierre Ellies-Oury, Sghaïer Chriki, Jean‐François Hocquette
Software Mentions: 3
Published: almost 4 years ago

10.1038/tp.2017.72

Intranasal oxytocin enhances intrinsic corticostriatal functional connectivity in women
Cited by: 66
Author(s): Richard A. I. Bethlehem, Michael Lombardo, Meng‐Chuan Lai, Bonnie Auyeung, Sarah K Crockford, Julia Deakin, S Soubramanian, Akeem Sule, Prantik Kundu, Valerie Voon, Simon Baron‐Cohen
Software Mentions: 2
Published: over 7 years ago

10.1371/journal.pone.0233994

The geography of sentiment towards the Women’s March of 2017
Cited by: 8
Author(s): Diane Felmlee, Simon Blanford, Stephen A. Matthews, Alan M. MacEachren
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0189753

Perceptions of scientific research literature and strategies for reading papers depend on academic career stage
Cited by: 48
Author(s): Kevin M. Hubbard, Sonja D. Dunbar
Software Mentions: 2
Published: almost 7 years ago

10.3390/plants8070214

Understanding the Role of the WRKY Gene Family under Stress Conditions in Pigeonpea (Cajanus Cajan L.)
Cited by: 19
Author(s): Akshay Singh, Pankaj Kumar Singh, Ajay Sharma, Nagendra Singh, Humira Sonah, Rupesh Deshmukh, T. R. Sharma
Software Mentions: 2
Published: over 5 years ago

10.1177/1362361316671012

Quantifying and exploring camouflaging in men and women with autism
Cited by: 360
Author(s): Meng‐Chuan Lai, Michael Lombardo, Amber Ruigrok, Bhismadev Chakrabarti, Bonnie Auyeung, Péter Szatmári, Francesca Happé, Simon Baron‐Cohen
Software Mentions: 2
Published: about 8 years ago

10.3897/BDJ.8.e59664

A list of land plants of Parque Nacional do Caparaó, Brazil, highlights the presence of sampling gaps within this protected area
Cited by: 11
Author(s): Marina Muniz Moreira, Tatiana Tavares Carrijo, Anderson Alves‐Araújo, Alessandro Rapini, Alexandre Salino, Aline D Firmino, Aline Pitol Chagas, Ana Flávia Alves Versiane, André M A Amorim, Andrews V S da Silva, Amélia Carlos Tuler, Ariane Luna Peixoto, Bethina S Soares, Braz A P Cosenza, Camila Nardy Delgado, Carla Lopes, Christian E. Silva, Daniel Elias Ferreira Barbosa, Daniele Monteiro, Danilo Marques, Dayvid Rodrigues Couto, Diego Rafael Gonzaga, Eduardo Couto Dalcin, Elton John de Lírio, Fabrício Schmitz Meyer, Fátima Regina Gonçalves Salimena, Felipe Henrique Monteiro Oliveira, Filipe Soares de Souza, Fernando B. Matos, Gabriel Depiantti, Guilherme Medeiros Antar, Gustavo Heiden, Henrique Machado Dias, Hian Carlos Ferreira de Sousa, Isabel T F Lopes, Isis M Rollim, Jaquelini Luber, Jefferson Prado, Jimi Naoki Nakajima, João Lanna, João Paulo Fernandes Zorzanelli, J. F. Teixeira de Freitas, José Fernando A. Baumgratz, Jovani B. S. Pereira, Juliana R P M Oliveira, Kelly Kunkel Antunes, Lana da Silva Sylvestre, Leandro Cardoso Pederneiras, Leandro Freitas, Leandro Lacerda Giacomin, Leonardo Dias Meireles, Leonardo N. Silva, Luciana Carvalho Pereira, Luis Alexandre E Silva, Luiz Menini Neto, Marcelo Monge, Marcelo Trovó, Marcelo Reginato, Marcos Sobral, Mário Rui Gomes, Mário Luís Garbin, Marli Pires Morim, Nayara D Soares, Paulo H. Labiak, Pedro Lage Viana, Pedro Henrique Cardoso, Pedro Luís Rodrigues de Moraes, Pedro Bond Schwartsburd, Quélita S. Moraes, Raquel F. Zorzanelli, Renara Nichio‐Amaral, Renato Goldenberg, Samyra Gomes Furtado, Thamara Arão Feletti, Valquíria Ferreira Dutra, Vinicius R. Bueno, Vinícius A.O. Dittrich, Rafaela Campostrini Forzza
Software Mentions: 2
Published: almost 4 years ago

10.3758/s13423-020-01851-3

Using mouse cursor tracking to investigate online cognition: Preserving methodological ingenuity while moving toward reproducible science
Cited by: 20
Author(s): Martin Schoemann, Denis O’Hora, Rick Dale, Stefan Scherbaum
Software Mentions: 2
Published: about 4 years ago

Projects: pypi: wordcloud

Papers Mentioning wordcloud 39