Data

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Indexes

Applications

Experiments

Papers

Papers: 10.1371/journal.pgen.1006883

https://doi.org/10.1371/journal.pgen.1006883

Systematic identification and characterization of regulatory elements derived from human endogenous retroviruses

Cited by: 108
Author(s): Jumpei Ito, Ryota Sugimoto, Hirofumi Nakaoka, Shiro Yamada, Tetsuaki Kimura, Takahide Hayano, Ituro Inoue
Published: about 9 years ago

Software Mentions 8

cran: amap
Another Multidimensional Analysis Package
Papers that mentioned: 37
Very Likely Science (85)
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
Very Likely Science (75)
cran: ReorderCluster
Reordering the Dendrogram According to the Class Labels
Papers that mentioned: 1
Very Likely Science (75)
cran: wordcloud
Word Clouds
Papers that mentioned: 39
Very Likely Science (75)
pypi: amap
Automated mouse atlas propagation
Papers that mentioned: 37
Very Likely Science (80)
pypi: dump
Wrapper around psql and pg_dump to make it easier to backup/restore a PostgreSQL database
Papers that mentioned: 6
Likely Science (40)
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
Very Likely Science (100)
pypi: wordcloud
A little word cloud generator
Papers that mentioned: 39
Very Likely Science (100)