Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.17824.2
https://doi.org/10.12688/f1000research.17824.2
Enhancing gene set enrichment using networks
Cited by: 2
Author(s): Michael Prummer
Published: about 5 years ago
Software Mentions 51
bioconductor: AnnotationDbi
Manipulation of SQLite-based annotations in BioconductorPapers that mentioned: 73
bioconductor: BiocParallel
Bioconductor facilities for parallel evaluationPapers that mentioned: 30
bioconductor: BiocWorkflowTools
Tools to aid the development of Bioconductor Workflow packagesPapers that mentioned: 2
bioconductor: CAMERA
Collection of annotation related methods for mass spectrometry dataPapers that mentioned: 429
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: GenomeInfoDb
Utilities for manipulating chromosome names, including modifying them to follow a particular naming stylePapers that mentioned: 7
cran: acepack
ACE and AVAS for Selecting Multiple Regression TransformationsPapers that mentioned: 2
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'Papers that mentioned: 164
cran: KernSmooth
Functions for Kernel Smoothing Supporting Wand & Jones (1995)Papers that mentioned: 34
cran: matrixStats
Functions that Apply to Rows and Columns of Matrices (and to Vectors)Papers that mentioned: 46
cran: SnowballC
Snowball Stemmers Based on the C 'libstemmer' UTF-8 LibraryPapers that mentioned: 14
pypi: GSA
Python Package to implement Gravitational Search Algorithm. Documentation at:https://github.com/deepanshu1999/GSAPapers that mentioned: 285