Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: BRugs
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/BRugs
Interface to the 'OpenBUGS' MCMC Software
21 versions
Latest release: over 1 year ago
11 dependent packages
1,206 downloads last month
Papers Mentioning BRugs 38
10.3390/s19204544
Semi-Automated Data Analysis for Ion-Selective Electrodes and Arrays Using the R Package ISEtoolsCited by: 3
Author(s): Peter W. Dillingham, Basim S. O. Alsaedi, Aleksandar Radu, Christina M. McGraw
Software Mentions: 6
Published: about 5 years ago
10.1002/ece3.2601
Evaluating citizen science data for forecasting species responses to national forest managementCited by: 29
Author(s): Louise Mair, Philip J. Harrison, Mari Jönsson, Swantje Löbel, Jenni Nordén, Juha Siitonen, Tomas Lämås, Anders Lundström, Tord Snäll
Software Mentions: 5
Published: almost 8 years ago
10.1016/j.prevetmed.2012.01.017
A Bayesian elicitation of veterinary beliefs regarding systemic dry cow therapy: Variation and importance for clinical trial designCited by: 12
Author(s): Helen M. Higgins, Ian L. Dryden, Martin J. Green
Software Mentions: 3
Published: over 12 years ago
10.1186/s12874-020-0917-3
A simulation study to compare different estimation approaches for network meta-analysis and corresponding methods to evaluate the consistency assumptionCited by: 6
Author(s): Corinna Kiefer, Sibylle Sturtz, Ralf Bender
Software Mentions: 3
Published: almost 5 years ago
10.3389/fgene.2015.00120
A re-formulation of generalized linear mixed models to fit family data in genetic association studiesCited by: 6
Author(s): Tao Wang, Peng He, Kwang Woo Ahn, Xujing Wang, Soumitra Ghosh, Purushottam W. Laud
Software Mentions: 3
Published: over 9 years ago
10.7717/peerj.1062
Photosynthetic response of Persian Gulf acroporid corals to summer versus winter temperature deviationsCited by: 10
Author(s): Jahangir Vajed Samiei, A. K. Md. Ehsanes Saleh, Ali Mehdinia, Arash Shirvani, Mohsen Kayal
Software Mentions: 3
Published: over 9 years ago
10.1371/journal.pone.0214224
Prevalence estimation of Italian ovine cystic echinococcosis in slaughterhouses: A retrospective Bayesian data analysis, 2010–2015Cited by: 9
Author(s): Federica Loi, Paola Berchialla, Gabriella Masu, Giovanna Masala, Paola Scaramozzino, Andrea Carvelli, Vincenzo Caligiuri, Annalisa Santi, Maria Cristina Bona, Carmen Maresca, Maria Grazia Zanoni, Gioia Capelli, Simona Iannetti, Annamaria Coccollone, Stefano Cappai, Sandro Rolesu, Toni Piseddu
Software Mentions: 3
Published: over 5 years ago
10.1371/journal.pone.0093241
Winter Climate Limits Subantarctic Low Forest Growth and EstablishmentCited by: 11
Author(s): Melanie A. Harsch, Matt S. McGlone, Janet M. Wilmshurst
Software Mentions: 2
Published: over 10 years ago
10.1093/gbe/evt184
Reduction and Expansion in Microsporidian Genome Evolution: New Insights from Comparative GenomicsCited by: 103
Author(s): Sirintra Nakjang, Tom A. Williams, Eva Heinz, Andrew K. Watson, Peter G. Foster, Kacper Sendra, Sarah E. Heaps, Robert P. Hirt, T. Martin Embley
Software Mentions: 2
Published: about 11 years ago
10.1186/s12982-015-0030-y
Bayesian models as a unified approach to estimate relative risk (or prevalence ratio) in binary and polytomous outcomesCited by: 16
Author(s): Vanessa Bielefeldt Leotti Torman, Suzi Alves Camey
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0060910
Area-Based Socioeconomic Position and Adult Glioma: A Hierarchical Analysis of Surveillance Epidemiology and End Results DataCited by: 26
Author(s): Jesse J. Plascak, James L. Fisher
Software Mentions: 2
Published: over 11 years ago
10.3389/fpsyg.2014.01087
Measurement bias detection through Bayesian factor analysisCited by: 10
Author(s): Mariska Barendse, Casper J. Albers, Frans J. Oort, Marieke E. Timmerman
Software Mentions: 2
Published: about 10 years ago
10.3389/fvets.2017.00193
Odds Ratio or Prevalence Ratio? An Overview of Reported Statistical Methods and Appropriateness of Interpretations in Cross-sectional Studies with Dichotomous Outcomes in Veterinary MedicineCited by: 108
Author(s): Brayan Alexander Fonseca Martinez, Vanessa Bielefeldt Leotti, Gustavo S. Silva, Luciana Neves Nunes, Gustavo Machado, Luís Gustavo Corbellini
Software Mentions: 2
Published: about 7 years ago
10.1371/journal.pone.0147311
Bayesian Estimation of Small Effects in Exercise and Sports ScienceCited by: 55
Author(s): Kerrie Mengersen, Christopher C. Drovandi, Christian P. Robert, David B. Pyne, Christopher J. Gore
Software Mentions: 2
Published: over 8 years ago
10.1002/pst.1897
A practical guide to pre-trial simulations for Bayesian adaptive trials using SAS and BUGSCited by: 3
Author(s): Christian Holm Hansen, Pamela Warner, Allan Walker, Richard Parker, Lucy Whitaker, Hilary O. D. Critchley, Christopher J. Weir
Software Mentions: 2
Published: over 6 years ago
10.1371/journal.pone.0118762
The Impact of Prior Information on Estimates of Disease Transmissibility Using Bayesian ToolsCited by: 9
Author(s): Carlee Moser, Mayetri Gupta, Brett N. Archer, Laura F. White
Software Mentions: 1
Published: over 9 years ago
10.1002/ece3.4031
When phylogeny and ecology meet: Modeling the occurrence of Trichoptera with environmental and phylogenetic dataCited by: 10
Author(s): Bruno Spacek Godoy, Lucas M. Camargos, Sara Lodi
Software Mentions: 1
Published: over 6 years ago
10.3389/fpsyt.2018.00759
Decision-Making Deficits Are Associated With Learning Impairments in Female College Students at High Risk for Anorexia Nervosa: Iowa Gambling Task and Prospect Valence Learning ModelCited by: 3
Author(s): Eunchan Na, Bit-Na Kang, Myung-Sun Kim
Software Mentions: 1
Published: almost 6 years ago
10.1186/s12963-021-00248-1
Cancer incidence estimation from mortality data: a validation study within a population-based cancer registryCited by: 4
Author(s): Daniel Redondo‐Sánchez, Miguel Rodríguez‐Barranco, Alberto Ameijide, Francisco Alonso, Pablo Fernández-Navarro, José Juan Jiménez-Moleón, María‐José Sánchez
Software Mentions: 1
Published: over 3 years ago
10.1038/srep30112
Herbicides do not ensure for higher wheat yield, but eliminate rare plant speciesCited by: 78
Author(s): Sabrina Gaba, Edith Gabriel, Joël Chadœuf, Florent Bonneu, Vincent Bretagnolle
Software Mentions: 1
Published: over 8 years ago
10.1002/sim.6912
Modelling semi‐attributable toxicity in dual‐agent phase I trials with non‐concurrent drug administrationCited by: 6
Author(s): Graham Wheeler, Michael Sweeting, Adrian P. Mander, Shing M. Lee, Ying Kuen Cheung
Software Mentions: 1
Published: almost 9 years ago
10.1186/1476-072X-6-39
Robustness of the BYM model in absence of spatial variation in the residualsCited by: 14
Author(s): Aurélien Latouche, Chantal Guihenneuc‐Jouyaux, Claire Girard, Denis Hémon
Software Mentions: 1
Published: almost 18 years ago
10.1186/s12879-015-1324-y
An evidence synthesis approach to estimating the incidence of symptomatic pertussis infection in the Netherlands, 2005–2011Cited by: 9
Author(s): Scott McDonald, Peter Teunis, Nicoline van der Maas, Sabine de Greeff, Hester E. de Melker, Mirjam Kretzschmar
Software Mentions: 1
Published: about 9 years ago
10.1007/s10928-019-09643-6
Bayesian approach to investigate a two-state mixed model of COPD exacerbationsCited by: 1
Author(s): Anna Largajolli, Misba Beerahee, Shuying Yang
Software Mentions: 1
Published: over 5 years ago
10.1186/s12874-015-0061-7
A general framework for comparative Bayesian meta-analysis of diagnostic studiesCited by: 32
Author(s): Joris Menten, Emmanuel Lesaffre
Software Mentions: 1
Published: over 9 years ago
10.1186/1471-2288-14-67
A Bayesian framework for estimating the incremental value of a diagnostic test in the absence of a gold standardCited by: 20
Author(s): Daphne Ling, Madhukar Pai, Ian Schiller, Nandini Dendukuri
Software Mentions: 1
Published: over 10 years ago
10.1186/s13567-015-0289-6
How to survey classical swine fever in wild boar (Sus scrofa) after the completion of oral vaccination? Chasing away the ghost of infection at different spatial scalesCited by: 8
Author(s): Thibault Saubusse, Jean-Daniel Masson, Mireille Le Dimma, David Abrial, Clara Marcé, R. Martin-Schaller, Anne Dupire, Marie‐Frédérique Le Potier, Sophie Rossi
Software Mentions: 1
Published: almost 9 years ago
10.12688/wellcomeopenres.15204.3
Bayesian evaluation of the performance of three diagnostic tests for Plasmodium falciparum infection in a low-transmission setting in Kilifi County, KenyaCited by: 7
Author(s): Marshal M. Mweu, Juliana Wambua, Fixtan Njuga, Philip Bejon, Daniel Mwanga
Software Mentions: 1
Published: about 5 years ago
10.12688/wellcomeopenres.16067.1
Accuracy of diagnostic tests for respiratory syncytial virus infection within a paediatric hospital population in Kilifi County, KenyaCited by: 3
Author(s): Marshal M. Mweu, Nickson Murunga, Juliet W Otieno, D. James Nokes
Software Mentions: 1
Published: over 4 years ago
10.1371/journal.pone.0069313
Rivermouth Alteration of Agricultural Impacts on Consumer Tissue δ15NCited by: 8
Author(s): James H. Larson, William B. Richardson, Jonathan M. Vallazza, John C. Nelson
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0073800
Phylogeny Drives Large Scale Patterns in Australian Marine Bioactivity and Provides a New Chemical Ecology Rationale for Future BiodiscoveryCited by: 24
Author(s): Elizabeth Evans-Illidge, Murray Logan, Jason Doyle, Jane Fromont, Christopher N. Battershill, Gavin Ericson, Carsten Wolff, A. Muirhead, Phillip Kearns, David Abdo, Stuart Kininmonth, Lyndon Llewellyn
Software Mentions: 1
Published: over 11 years ago
10.1371/journal.pone.0015185
Habitat Associations of Juvenile Fish at Ningaloo Reef, Western Australia: The Importance of Coral and AlgaeCited by: 93
Author(s): Shaun K. Wilson, Martial Depczynski, Rebecca Fisher, Thomas H. Holmes, Rebecca A. O’Leary, Paul Tinkler
Software Mentions: 1
Published: about 14 years ago
10.1371/journal.pone.0112252
Intrinsic Variability in Shell and Soft Tissue Growth of the Freshwater Mussel Lampsilis siliquoideaCited by: 9
Author(s): James H. Larson, Nathan L. Eckert, Michelle R. Bartsch
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0128091
Projections of the Current and Future Disease Burden of Hepatitis C Virus Infection in MalaysiaCited by: 19
Author(s): Scott McDonald, Maznah Dahlui, Rosmawati Mohamed, Herlianna Naning, Fatiha Hana Shabaruddin, Adeeba Kamarulzaman
Software Mentions: 1
Published: over 9 years ago
10.1371/journal.pone.0026670
Size-Specific Tree Mortality Varies with Neighbourhood Crowding and Disturbance in a Montane Nothofagus ForestCited by: 64
Author(s): Jennifer M. Hurst, Robert B. Allen, David A. Coomes, Richard P. Duncan
Software Mentions: 1
Published: about 13 years ago
10.1371/journal.pone.0021890
Using an Uncertainty-Coding Matrix in Bayesian Regression Models for Haplotype-Specific Risk Detection in Family Association StudiesCited by: 3
Author(s): Yuanyuan Huang, Mei‐Hsien Lee, Wei-Jen Chen, Chuhsing Kate Hsiao
Software Mentions: 1
Published: over 13 years ago
10.1371/journal.pone.0155050
Anti-Tumor Effects of Ketogenic Diets in Mice: A Meta-AnalysisCited by: 91
Author(s): Rainer J. Klement, Colin E. Champ, Christoph Otto, Ulrike Kämmerer
Software Mentions: 1
Published: over 8 years ago
10.1371/journal.pone.0070666
Fatty Acid Composition at the Base of Aquatic Food Webs Is Influenced by Habitat Type and Watershed Land UseCited by: 23
Author(s): James H. Larson, William B. Richardson, Brent C. Knights, Lynn A. Bartsch, Michelle R. Bartsch, John C. Nelson, Jason A. Veldboom, Jon M. Vallazza
Software Mentions: 1
Published: over 11 years ago