Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
cran projects 6,234
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and PermutationsPapers that mentioned: 6,292
cran: MASS
Support Functions and Datasets for Venables and Ripley's MASSPapers that mentioned: 2,353
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear ModelsPapers that mentioned: 1,607
cran: randomForest
Breiman and Cutler's Random Forests for Classification and RegressionPapers that mentioned: 1,447
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matricesPapers that mentioned: 1,283
cran: mgcv
Mixed GAM Computation Vehicle with Automatic Smoothness EstimationPapers that mentioned: 1,251
cran: FactoMineR
Multivariate Exploratory Data Analysis and Data MiningPapers that mentioned: 1,101
cran: psych
Procedures for Psychological, Psychometric, and Personality ResearchPapers that mentioned: 1,085
cran: ade4
Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental SciencesPapers that mentioned: 809
cran: HyPhy
Macroevolutionary phylogentic analysis of species trees and gene treesPapers that mentioned: 722
cran: factoextra
Extract and Visualize the Results of Multivariate Data AnalysesPapers that mentioned: 650
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)Papers that mentioned: 586
cran: STAT
Interactive Document for Working with Basic Statistical AnalysisPapers that mentioned: 508
cran: survivalROC
Time-Dependent ROC Curve Estimation from Censored Survival DataPapers that mentioned: 479
cran: Spectrum
Fast Adaptive Spectral Clustering for Single and Multi-View DataPapers that mentioned: 450
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap ResamplingPapers that mentioned: 442
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU WienPapers that mentioned: 419
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.Papers that mentioned: 416
cran: glmmTMB
Generalized Linear Mixed Models using Template Model BuilderPapers that mentioned: 373
cran: TESS
Diversification Rate Estimation and Fast Simulation of Reconstructed Phylogenetic Trees under Tree-Wide Time-Heterogeneous Birth-Death Processes Including Mass-Extinction EventsPapers that mentioned: 359
cran: MatchIt
Nonparametric Preprocessing for Parametric Causal InferencePapers that mentioned: 358
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting SetsPapers that mentioned: 319