cran: OpenStreetMap | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0239842

A spatiotemporal comparison of length-at-age in the coral reef fish Acanthurus nigrofuscus between marine reserves and fished reefs
Cited by: 1
Author(s): Mathias T. Cramer, Robert Y. Fidler, Louis Penrod, Jessica Carroll, Ralph G. Turingan
Software Mentions: 20
Published: over 3 years ago

10.1371/journal.pone.0169748

SoilGrids250m: Global gridded soil information based on machine learning
Cited by: 2,126
Author(s): Tomislav Hengl, Jorge Mendes de Jesus, G.B.M. Heuvelink, M. Ruiperez González, Milorad Kilibarda, Aleksandar Blagotić, Wei Shangguan, Marvin N. Wright, Xiaoyuan Geng, Bernhard Bauer-Marschallinger, Mário Guevara, Rodrigo Vargas, R.A. MacMillan, N.H. Batjes, J.G.B. Leenaars, Eloi Ribeiro, Ichsani Wheeler, S. Mantel
Software Mentions: 19
Published: about 7 years ago

10.1371/journal.pbio.3000673

“Frozen evolution” of an RNA virus suggests accidental release as a potential cause of arbovirus re-emergence
Cited by: 15
Author(s): David Pascall, Kyriaki Nomikou, Emmanuel Bréard, Stéphan Zientara, Ana da Silva Filipe, Bernd Hoffmann, Maude Jacquot, Joshua B. Singer, Kris De Clercq, Anette Bøtner, Corinne Sailleau, Cyril Viarouge, Carrie Batten, Giantonella Puggioni, Ciriaco Ligios, Giovanni Savini, Piet A. van Rijn, Peter Mertens, Roman Biek, Massimo Palmarini
Software Mentions: 18
Published: about 4 years ago

10.7717/peerj.5457

Global mapping of potential natural vegetation: an assessment of machine learning algorithms for estimating land potential
Cited by: 84
Author(s): Tomislav Hengl, Markus Walsh, Jonathan Sanderman, Ichsani Wheeler, Sandy P. Harrison, Iain Colin Prentice
Software Mentions: 17
Published: over 5 years ago

10.1038/s41597-019-0344-7

A global database for metacommunity ecology, integrating species, traits, environment and space
Cited by: 21
Author(s): Aliénor Jeliazkov, Darko Mijatovic, Stéphane Chantepie, Nigel R. Andrew, Raphaël Arlettaz, Luc Barbaro, Nadia Barsoum, Alena Sucháčková Bartoňová, Elena Belskaya, Núria Bonada, Anik Brind’Amour, Rodrigo Assis de Carvalho, Helena Castro, Damian Chmura, Philippe Choler, Karen M. Chong‐Seng, Daniel F. R. Cleary, A. Cormont, William K. Cornwell, Ramiro de Campos, Nicole J. de Voogd, Sylvain Dolédec, Joshua Adam Drew, Frank Dziock, Anthony S. Eallonardo, Melanie J. Edgar, Fábio Z. Farneda, Domingo Flores Hernández, Cédric Frenette‐Dussault, Guillaume Fried, Belinda Gallardo, Heloise Gibb, Thiago Gonçalves‐Souza, Janet Higuti, Jean‐Yves Humbert, Boris R. Krasnov, Eric Le Saux, Zoë Lindo, Adrià López‐Baucells, E. Cronin Lowe, Bryndís Marteinsdóttir, Koenraad Martens, Peter J. Meffert, Andrés Mellado‐Díaz, Myles H. M. Menz, Christoph F. J. Meyer, Julia Ramos-Miranda, David Mouillot, Alessandro Ossola, Robin J. Pakeman, Sandrine Pavoine, Burak K. Pekin, Joan Pino, Arnaud Pocheville, Francesco Pomati, Peter Poschlod, Honor C. Prentice, Oliver Purschke, Valérie Raevel, Triin Reitalu, Willem Renema, Ignacio Ribera, Natalie Robinson, Bjorn J. M. Robroek, Ricardo Rocha, Sen-Her Shieh, Rebecca Spake, Monika Staniaszek‐Kik, Michał Stanko, Francisco Leonardo Tejerina‐Garro, Cajo J. F. ter Braak, Mark C. Urban, Roel van Klink, Sébastien Villéger, R.J.M. Wegman, Martin J. Westgate, Jonas Wolff, Jan Żarnowiec, М. П. Золотарев, Jonathan M. Chase
Software Mentions: 16
Published: over 4 years ago

10.1002/ece3.6959

In the shadows of snow leopards and the Himalayas: density and habitat selection of blue sheep in Manang, Nepal
Cited by: 11
Author(s): Marc Filla, Rinzin Phunjok Lama, Tashi Rapte Ghale, Johannes Signer, Tim Filla, Raja Ram Aryal, Marco Heurich, Matthias Waltert, Niko Balkenhol, Igor Khorozyan
Software Mentions: 16
Published: over 3 years ago

10.1093/gigascience/giaa039

Biospytial: spatial graph-based computing for ecological Big Data
Cited by: 5
Author(s): Juan Manuel Escamilla Molgora, Luigi Sedda, Peter M. Atkinson
Software Mentions: 14
Published: about 4 years ago

10.1371/journal.pntd.0007061

Population genetic structure and geographical variation in Neotricula aperta (Gastropoda: Pomatiopsidae), the snail intermediate host of Schistosoma mekongi (Digenea: Schistosomatidae)
Cited by: 2
Author(s): Stephen W. Attwood, Liang Liu, Guan-Nan Huo
Software Mentions: 12
Published: over 5 years ago

10.1186/s12879-019-4585-z

Development of a high number, high coverage dog rabies vaccination programme in Sri Lanka
Cited by: 8
Author(s): Carlos Sánchez-Soriano, Andrew D Gibson, Luke Gamble, Jordana L. Burdon Bailey, Samantha Green, Mark Green, Barend M. deC. Bronsvoort, Ian Handel, Richard J. Mellanby, Stella Mazeri
Software Mentions: 11
Published: over 4 years ago

10.3389/fneur.2019.00743

An Introduction to Software Tools, Data, and Services for Geospatial Analysis of Stroke Services
Cited by: 8
Author(s): Mark Padgham, Geoff Boeing, David Cooley, Nicholas Tierney, Michael Sumner, Thanh G. Phan, Richard Beare
Software Mentions: 11
Published: almost 5 years ago

10.1186/s12942-021-00262-4

Estimating the local spatio‐temporal distribution of malaria from routine health information systems in areas of low health care access and reporting
Cited by: 8
Author(s): Elizabeth Hyde, Matthew H. Bonds, Felana Angella Ihantamalala, Ann C. Miller, Laura Cordier, Bénédicte Razafinjato, Herinjaka Andriambolamanana, Marius Randriamanambintsoa, Michèle Barry, Jean Claude Andrianirinarison, Mauricette Andriamananjara, Andrés Garchitorena
Software Mentions: 11
Published: about 3 years ago

10.1371/journal.pone.0225734

PyLandStats: An open-source Pythonic library to compute landscape metrics
Cited by: 19
Author(s): Martí Bosch
Software Mentions: 11
Published: over 4 years ago

10.1371/journal.pone.0258031

High site-fidelity in common bottlenose dolphins despite low salinity exposure and associated indicators of compromised health
Cited by: 6
Author(s): Ryan Takeshita, Brian C. Balmer, Francesca Messina, Eric S. Zolman, Len Thomas, Randall S. Wells, Cynthia R. Smith, Teresa K. Rowles, Lori H. Schwacke
Software Mentions: 11
Published: over 2 years ago

10.1038/s41598-019-48986-5

Assessing Susceptibility of Debris Flow in Southwest China Using Gradient Boosting Machine
Cited by: 36
Author(s): Baofeng Di, Hanyue Zhang, Yongyao Liu, Jierui Li, Ningsheng Chen, Constantine A. Stamatopoulos, Yuzhou Luo, Yu Zhan
Software Mentions: 10
Published: over 4 years ago

10.1007/s10705-017-9870-x

Soil nutrient maps of Sub-Saharan Africa: assessment of soil nutrient content at 250 m spatial resolution using machine learning
Cited by: 170
Author(s): Tomislav Hengl, J.G.B. Leenaars, Keith D. Shepherd, Markus Walsh, G.B.M. Heuvelink, Tekalign Mamo, H. Tilahun, Ezra Berkhout, Matthew Cooper, Eric Fegraus, Ichsani Wheeler, Nketia A. Kwabena
Software Mentions: 10
Published: almost 7 years ago

10.1371/journal.pone.0233242

Determining soil particle-size distribution from infrared spectra using machine learning predictions: Methodology and modeling
Cited by: 4
Author(s): Élizabeth Parent, Léon‐Étienne Parent, Léon E. Parent
Software Mentions: 10
Published: almost 3 years ago

10.1111/mec.15179

Salinity drives meiofaunal community structure dynamics across the Baltic ecosystem
Cited by: 25
Author(s): Elias Broman, Caroline Raymond, Christian Sommer, Jonas S. Gunnarsson, Simon Creer, Francisco J. A. Nascimento
Software Mentions: 10
Published: almost 5 years ago

10.1186/s13071-020-04461-z

Oviposition of Aedes japonicus japonicus (Diptera: Culicidae) and associated native species in relation to season, temperature and land use in western Germany
Cited by: 12
Author(s): Linus Früh, Helge Kampen, Marcel B. Koban, Nadja Pernat, Günter A. Schaub, Doreen Werner
Software Mentions: 10
Published: over 3 years ago

10.1371/journal.pntd.0007360

Seasonal patterns of dengue fever in rural Ecuador: 2009-2016
Cited by: 12
Author(s): Rachel Sippy, Diego Herrera, David Gaus, Ronald E. Gangnon, Jonathan A. Patz, Jorge E. Osorio
Software Mentions: 10
Published: about 5 years ago

10.1371/journal.pone.0247535

Tools for mapping multi-scale settlement patterns of building footprints: An introduction to the R package foot
Cited by: 21
Author(s): Warren C. Jochem, Andrew J. Tatem
Software Mentions: 10
Published: about 3 years ago

10.1186/s40249-020-00677-4

Factors associated with mobile phone ownership and potential use for rabies vaccination campaigns in southern Malawi
Cited by: 15
Author(s): Orla Marron, Gareth J. Thomas, Jordana L. Burdon Bailey, Dagmar Mayer, Paul Orion Grossman, Frederic Lohr, Andrew D Gibson, Luke Gamble, Patrick Chikungwa, Julius L.C. Chulu, Ian Handel, Barend Mark de Clare Bronsvoort, Richard J. Mellanby, Stella Mazeri
Software Mentions: 9
Published: almost 4 years ago

10.1038/s41598-021-96362-z

High efficacy of microbial larvicides for malaria vectors control in the city of Yaounde Cameroon following a cluster randomized trial
Cited by: 8
Author(s): Christophe Antonio-Nkondjio, Patricia Doumbe-Belisse, Landre Djamouko-Djonkam, Carmène Sandra Ngadjeu, Abdou Talipouo, Edmond Kopya, Roland Bamou, Marie Paul Audrey Mayi, Nadège Sonhafouo-Chiana, Diane Leslie Nkahe, Raymond Tabue, Dorothy A. Fosah, Jude D. Bigoga, Parfait Awono-Ambene, Charles S. Wondji
Software Mentions: 9
Published: over 2 years ago

10.1371/journal.ppat.1009068

Modeling intra-mosquito dynamics of Zika virus and its dose-dependence confirms the low epidemic potential of Aedes albopictus
Cited by: 16
Author(s): Sébastian Lequime, Jean-Sébastien Dehecq, Séverine Matheus, Franck de Laval, Lionel Alméras, Sébastien Briolant, Albin Fontaine
Software Mentions: 9
Published: over 3 years ago

10.1038/s41598-020-74691-9

Integration of geoscience frameworks into digital pathology analysis permits quantification of microarchitectural relationships in histological landscapes
Cited by: 4
Author(s): Timothy J. Kendall, Catherine Mary Duff, A. D. Thomson, John P. Iredale
Software Mentions: 9
Published: over 3 years ago

10.1038/s41598-018-33109-3

Bayesian spatiotemporal analysis for association of environmental factors with hand, foot, and mouth disease in Guangdong, China
Cited by: 8
Author(s): Zhicheng Du, Wayne R. Lawrence, Wangjian Zhang, Dingmei Zhang, Shicheng Yu, Yuantao Hao
Software Mentions: 9
Published: over 5 years ago

10.1371/journal.pntd.0006159

Barriers of attendance to dog rabies static point vaccination clinics in Blantyre, Malawi
Cited by: 30
Author(s): Stella Mazeri, Andrew D Gibson, Natascha Meunier, Barend M. deC. Bronsvoort, Ian Handel, Richard J. Mellanby, Luke Gamble
Software Mentions: 9
Published: over 6 years ago

10.1038/s41598-017-09154-9

Analysis of spatial genetic variation reveals genetic divergence among populations of Primula veris associated to contrasting habitats
Cited by: 3
Author(s): Pablo Deschepper, Rein Brys, Miguel A. Fortuna, Hans Jacquemyn
Software Mentions: 8
Published: over 6 years ago

10.1371/journal.pone.0230262

So far, so good… Similar fitness consequences and overall energetic costs for short and long-distance migrants in a seabird
Cited by: 10
Author(s): David Pelletier, Yannick Seyer, Stefan Garthe, Salomé Bonnefoi, Richard A. Phillips, Magella Guillemette
Software Mentions: 8
Published: about 4 years ago

10.1002/ece3.5572

Rapid evolution of <i>Medicago polymorpha</i> during invasion shifts interactions with the soybean looper
Cited by: 4
Author(s): Chandra N. Jack, Maren Friesen
Software Mentions: 8
Published: over 4 years ago

10.1002/ece3.4442

Females know better: Sex-biased habitat selection by the European wildcat
Cited by: 25
Author(s): Teresa Martins de Oliveira, Fermín Urra, José María López‐Martín, Elena Ballesteros‐Duperón, José Miguel Barea‐Azcón, Marcos Moleón, José María Gil‐Sánchez, Paulo C. Alves, Francisco Díaz‐Ruíz, Pablo Ferreras, Pedro Monterroso
Software Mentions: 8
Published: over 5 years ago

10.3389/fneur.2019.00331

Googling Boundaries for Operating Mobile Stroke Unit for Stroke Codes
Cited by: 7
Author(s): Thanh G. Phan, Richard Beare, Mark Parsons, Henry Zhao, Stephen M. Davis, Geoffrey A. Donnan, Velandai Srikanth, Henry Ma
Software Mentions: 8
Published: about 5 years ago

10.1371/journal.pone.0220926

Gut microbiome shifts with urbanization and potentially facilitates a zoonotic pathogen in a wading bird
Cited by: 50
Author(s): Maureen H. Murray, Emily W. Lankau, Anjelika D. Kidd, Catharine N. Welch, Taylor Ellison, Henry Adams, Erin K. Lipp, Sonia M. Hernández
Software Mentions: 8
Published: about 4 years ago

10.1371/journal.pone.0179623

Estimating the basic reproduction rate of HFMD using the time series SIR model in Guangdong, China
Cited by: 28
Author(s): Zhicheng Du, Wangjian Zhang, Dingmei Zhang, Shicheng Yu, Yuantao Hao
Software Mentions: 8
Published: almost 7 years ago

10.1038/s41598-019-43716-3

Long-term field comparison of multiple low-cost particulate matter sensors in an outdoor urban environment
Cited by: 146
Author(s): Florentin M. J. Bulot, Steven J. Johnston, Philip J. Basford, Natasha H. C. Easton, Mihaela Apetroaie-Cristea, Gavin L. Foster, Andrew Morris, Simon J. Cox, Matthew Loxham
Software Mentions: 8
Published: almost 5 years ago

10.1186/s12879-016-1475-5

DotMapper: an open source tool for creating interactive disease point maps
Cited by: 17
Author(s): Catherine M. Smith, Andrew Hayward
Software Mentions: 7
Published: about 8 years ago

10.1371/journal.pone.0254293

easyFulcrum: An R package to process and analyze ecological sampling data generated using the Fulcrum mobile application
Cited by: 4
Author(s): Matteo Di Bernardo, Timothy A. Crombie, Daniel E. Cook, Erik C. Andersen
Software Mentions: 7
Published: over 2 years ago

10.1111/mec.14470

Landscape attributes governing local transmission of an endemic zoonosis: Rabies virus in domestic dogs
Cited by: 50
Author(s): Kirstyn Brunker, Philippe Lemey, Denise A. Marston, Anthony R. Fooks, Ahmed Lugelo, Chanasa Ngeleja, Katie Hampson, Roman Biek
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pgen.1009566

Drainage-structuring of ancestral variation and a common functional pathway shape limited genomic convergence in natural high- and low-predation guppies
Cited by: 19
Author(s): James R. Whiting, Josephine R. Paris, Mijke J. van der Zee, Paul J. Parsons, Detlef Weigel, Bonnie A. Fraser
Software Mentions: 7
Published: almost 3 years ago

10.3389/fmicb.2020.572931

Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata
Cited by: 30
Author(s): Tatyana Chernikova, Rafael Bargiela, Stepan V. Toshchakov, Vignesh Shivaraman, Evgenii A. Lunev, Michail M. Yakimov, David N. Thomas, Peter N. Golyshin
Software Mentions: 7
Published: over 3 years ago

10.7717/peerj.10836

Fungal and bacterial communities of ‘Pinot noir’ must: effects of vintage, growing region, climate, and basic must chemistry
Cited by: 9
Author(s): Kerri L. Steenwerth, Ian Arthur Morelan, Ruby J. Stahel, Rosa Figueroa‐Balderas, Dario Cantu, Jungmin Lee, Ron C. Runnebaum, Amisha T. Poret-Peterson
Software Mentions: 7
Published: over 3 years ago

10.7717/peerj.7863

Manx shearwater (<i>Puffinus puffinus</i>) rafting behaviour revealed by GPS tracking and behavioural observations
Cited by: 6
Author(s): Cerren Richards, Oliver Padget, Tim Guilford, Amanda E. Bates
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0250783

Investigating variability in microbial community composition in replicate environmental DNA samples down lake sediment cores
Cited by: 12
Author(s): John K. Pearman, Georgia Thomson‐Laing, Jamie Howarth, Marcus J. Vandergoes, L. M. Thompson, Andrew Rees, Susanna A. Wood
Software Mentions: 7
Published: about 3 years ago

10.1186/s12942-019-0177-9

Using data from online geocoding services for the assessment of environmental obesogenic factors: a feasibility study
Cited by: 13
Author(s): Maximilian Präger, Christoph Kurz, Julian Böhm, Michael Laxy, Werner Maier
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pone.0183691

Spatial mismatch analysis among hotspots of alien plant species, road and railway networks in Germany and Austria
Cited by: 26
Author(s): Yanina Benedetti, Federico Morelli
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pntd.0008004

Implementation of a mass canine rabies vaccination campaign in both rural and urban regions in southern Malawi
Cited by: 14
Author(s): Carlos Sánchez-Soriano, Andrew D Gibson, Luke Gamble, Jordana L. Burdon Bailey, Dagmar Mayer, Frederic Lohr, Patrick Chikungwa, Julius L.C. Chulu, Ian Handel, Barend M. deC. Bronsvoort, Richard J. Mellanby, Stella Mazeri
Software Mentions: 6
Published: over 4 years ago

10.3390/insects11080488

Arthropod Communities in Urban Agricultural Production Systems under Different Irrigation Sources in the Northern Region of Ghana
Cited by: 3
Author(s): Louis Amprako, Kathrin Stenchly, Martin Wiehle, G. Nyarko, Andreas Buerkert
Software Mentions: 6
Published: almost 4 years ago

10.1002/ece3.7020

Numerical response of predators to large variations of grassland vole abundance and long‐term community changes
Cited by: 3
Author(s): Patrick Giraudoux, Aurélien Levret, Eve Afonso, Michaël Cœurdassier, Geoffroy Couval
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0151895

Patterns of Species Richness and Turnover for the South American Rodent Fauna
Cited by: 57
Author(s): Renan Maestri, Bruce D. Patterson
Software Mentions: 6
Published: about 8 years ago

10.1371/journal.pone.0105992

SoilGrids1km — Global Soil Information Based on Automated Mapping
Cited by: 785
Author(s): Tomislav Hengl, Jorge Mendes de Jesus, R.A. MacMillan, N.H. Batjes, G.B.M. Heuvelink, Eloi Ribeiro, Alessandro Samuel‐Rosa, B. Kempen, J.G.B. Leenaars, Markus Walsh, M. Ruiperez González
Software Mentions: 6
Published: over 9 years ago

10.1371/journal.pntd.0009537

Spatio-temporal modelling of the first Chikungunya epidemic in an intra-urban setting: The role of socioeconomic status, environment and temperature
Cited by: 10
Author(s): Laís Picinini Freitas, Alexandra M. Schmidt, William Cossich, Oswaldo Gonçalves Cruz, Marília Sá Carvalho
Software Mentions: 6
Published: almost 3 years ago

10.1371/journal.pntd.0008616

Predicting the environmental suitability and population at risk of podoconiosis in Africa
Cited by: 8
Author(s): Kebede Deribe, Hamish Simpson, Rachel L. Pullan, Mbonigaba Jean Bosco, Samuel Wanji, Nicole Davis Weaver, Christopher J L Murray, Melanie Newport, Simon I. Hay, Gail Davey, Jorge Cano
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-021-98550-3

Environment and culture shape both the colour lexicon and the genetics of colour perception
Cited by: 11
Author(s): Mathilde Josserand, Emma Meeussen, Asifa Majid, Dan Dediu
Software Mentions: 6
Published: over 2 years ago

10.7717/peerj.10563

Improving insect conservation across heterogeneous landscapes using species–habitat networks
Cited by: 5
Author(s): Andree Cappellari, Lorenzo Marini
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-021-82404-z

The evolution of humanitarian mapping within the OpenStreetMap community
Cited by: 53
Author(s): Benjamin Herfort, Sven Lautenbach, João Porto de Albuquerque, Jennings Anderson, Alexander Zipf
Software Mentions: 6
Published: over 3 years ago

10.7717/peerj.9209

Estimating food resource availability in arid environments with Sentinel 2 satellite imagery
Cited by: 4
Author(s): Caterina Funghi, René H. J. Heim, Wiebke Schuett, Simon C. Griffith, Jens Oldeland
Software Mentions: 6
Published: almost 4 years ago

10.1186/s12862-020-01721-5

Range and niche expansion through multiple interspecific hybridization: a genotyping by sequencing analysis of Cherleria (Caryophyllaceae)
Cited by: 2
Author(s): Abigail J. Moore, Jennifer A. Messick, Joachim W. Kadereit
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pone.0221355

Effects of road salt on microbial communities: Halophiles as biomarkers of road salt pollution
Cited by: 17
Author(s): Wolf T. Pecher, M. Emad Al Madadha, Priya DasSarma, Folasade Ekulona, Eric J. Schott, Kelli Crowe, Bojana Stojkovic Gut, Shiladitya DasSarma
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0255304

Coral reefs in the Gilbert Islands of Kiribati: Resistance, resilience, and recovery after more than a decade of multiple stressors
Cited by: 22
Author(s): Sara E. Cannon, Erietera Aram, Toaea Beiateuea, A. Kiareti, Max Peter, Simon D. Donner
Software Mentions: 5
Published: over 2 years ago

10.1371/journal.pone.0250164

A comparison of the performance on extrinsic and intrinsic cartographic visualizations through correctness, response time and cognitive processing
Cited by: 8
Author(s): Čeněk Šašinka, Zdeněk Stachoň, Jiří Čeněk, Alžběta Šašinková, S Popelka, Pavel Ugwitz, David Lacko
Software Mentions: 5
Published: about 3 years ago

10.3390/ani10061097

Map-A-Mole: Greenspace Area Influences the Presence and Abundance of the European Mole Talpa europaea in Urban Habitats
Cited by: 1
Author(s): Mark D. E. Fellowes, Kojo Acquaah-Harrison, Fábio Angeoletto, Jeater Waldemar Maciel Corrêa Santos, Deleon da Silva Leandro, Elise Amador Rocha, Tara J. Pirie, Rebecca L. Thomas
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0143532

The Impact of the Invasive Alien Plant, Impatiens glandulifera, on Pollen Transfer Networks
Cited by: 43
Author(s): Carine Emer, Ian P. Vaughan, Simon J. Hiscock, Jane Memmott
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pone.0083452

Tracking Diet Preferences of Bats Using Stable Isotope and Fatty Acid Signatures of Faeces
Cited by: 35
Author(s): Monika My-Y Lam, Dominik Martin‐Creuzburg, Karl‐Otto Rothhaupt, Kamran Safi, Elizabeth Yohannes, Ioanna Salvarina
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0233726

Landscape- and local-scale habitat influences on occurrence and detection probability of Clark’s nutcrackers: Implications for conservation
Cited by: 2
Author(s): Taza D. Schaming, Chris Sutherland
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-018-23605-x

High-resolution GPS tracking reveals sex differences in migratory behaviour and stopover habitat use in the Lesser Black-backed Gull Larus fuscus
Cited by: 28
Author(s): Jeroen Baert, Eric Stienen, Brigitte C. Heylen, Marwa M. Kavelaars, Roland-Jan Buijs, Judy Shamoun‐Baranes, Luc Lens, Wendt Müller
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pntd.0007141

Association of rodent-borne Leptospira spp. with urban environments in Malaysian Borneo
Cited by: 39
Author(s): Kim R. Blasdell, Sergé Morand, David Perera, Cadhla Firth
Software Mentions: 5
Published: about 5 years ago

10.12688/wellcomeopenres.16075.2

A reproducible picture of open access health facility data in Africa and R tools to support improvement
Cited by: 4
Author(s): Andy South, Ahmadou Dicko, Mark Herringer, Peter M. Macharia, Joseph Maina, Emelda A. Okiro, Robert W. Snow, Van der Walt Anelda
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.pone.0161621

Evaluation of the Performance of Five Diagnostic Tests for Fasciola hepatica Infection in Naturally Infected Cattle Using a Bayesian No Gold Standard Approach
Cited by: 54
Author(s): Stella Mazeri, Neil Sargison, Robert F. Kelly, Barend M. deC. Bronsvoort, Ian Handel
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pntd.0008046

Genomic epidemiology of Vibrio cholerae reveals the regional and global spread of two epidemic non-toxigenic lineages
Cited by: 15
Author(s): Haoqiu Wang, Chao Yang, Sun Zhou, Wei Zheng, Wei Zhang, Hua Yu, Yarong Wu, Xavier Didelot, Ruifu Yang, Jinren Pan, Yu‐Jun Cui
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0187329

Pleistocene climatic oscillations in Neotropical open areas: Refuge isolation in the rodent Oxymycterus nasutus endemic to grasslands
Cited by: 19
Author(s): Willian Thomaz Peçanha, Sérgio Luiz Althoff, Daniel Galiano, Fernando Marques Quintela, Renan Maestri, Gislene Lopes Gonçalves, Thales Renato Ochotorena de Freitas
Software Mentions: 5
Published: over 6 years ago

10.1093/jmammal/gyab022

Kangaroos at maximum capacity: health assessment of free-ranging eastern grey kangaroos on a coastal headland
Cited by: 4
Author(s): Maquel E. Brandimarti, Rachael Gray, Fabiola R. O. Silva, Catherine A. Herbert
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.pone.0255411

Citizen science reveals unexpected solute patterns in semiarid river networks
Cited by: 3
Author(s): Erin Jones, Rebecca J. Frei, Raymond M. Lee, Jordan D. Maxwell, Rhetta Shoemaker, Andrew Follett, Gabriella M. Lawson, Madeleine Malmfeldt, Rachel Watts, Zachary T. Aanderud, Carter Allred, Allison Tuttle Asay, Madeline Buhman, Hunter C Burbidge, Amber Call, Trevor Crandall, Isabella M. Errigo, Natasha A. Griffin, Neil C. Hansen, Jansen C. Howe, Emily L. Meadows, Elizabeth Kujanpää, Leslie A. Lange, Monterey L. Nelson, Adam J. Norris, Elysse Ostlund, Nicholas J. Suiter, Kaylee Brook Tanner, Joseph Tolworthy, Maria Camila Vargas, Benjamin W. Abbott
Software Mentions: 5
Published: over 2 years ago

10.1186/s12889-019-6565-z

Socioeconomic and environmental factors associated with malaria hotspots in the Nanoro demographic surveillance area, Burkina Faso
Cited by: 30
Author(s): Toussaint Rouamba, Seydou Nakanabo‐Diallo, Karim Derra, Eli Rouamba, Adama Kazienga, Yasuko Inoue, Ernest Ouédraogo, Moussa Waongo, Sokhna Dieng, Abdoulaye Guindo, Boukary Ouédraogo, Kankoé Sallah, Seydou Barro, Pascal Yaka, Fati Kirakoya‐Samadoulougou, Halidou Tinto, Jean Gaudart
Software Mentions: 5
Published: about 5 years ago

10.1038/s41598-021-92206-y

Seroprevalence of SARS-CoV-2 antibodies in Saint Petersburg, Russia: a population-based study
Cited by: 15
Author(s): Антон Барчук, Dmitriy Skougarevskiy, Kirill Titaev, Daniil Shirokov, Yulia Raskina, Anastasia Novkunkskaya, Petr Talantov, А. А. Исаев, Ekaterina Pomerantseva, Svetlana Zhikrivetskaya, Lubov Barabanova, Vadim Volkov
Software Mentions: 5
Published: almost 3 years ago

10.1038/s41598-020-67209-w

Laboratory culture of the California Sea Firefly Vargula tsujii (Ostracoda: Cypridinidae): Developing a model system for the evolution of marine bioluminescence
Cited by: 5
Author(s): Jessica A. Goodheart, Geetanjali Minsky, Mira N. Brynjegard-Bialik, Michael S. Drummond, Jacqueline Muñoz, Timothy R. Fallon, Darrin T. Schultz, Jing‐Ke Weng, Elizabeth Torres, Todd H. Oakley
Software Mentions: 5
Published: almost 4 years ago

10.3389/fmicb.2019.02095

A Metabarcoding Analysis of the Mycobiome of Wheat Ears Across a Topographically Heterogeneous Field
Cited by: 13
Author(s): Gabriele Schiro, Pierluigi Colangeli, Marina Müller
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pcbi.1009300

MicrobeTrace: Retooling molecular epidemiology for rapid public health response
Cited by: 17
Author(s): Ellsworth Campbell, Anthony Boyles, Anupama Shankar, Jay Kim, S. P. Knyazev, Roxana Cintrón, William M. Switzer
Software Mentions: 5
Published: over 2 years ago

10.1371/journal.pone.0227169

Effects of land-use change and related pressures on alien and native subsets of island communities
Cited by: 11
Author(s): Katia Sánchez-Ortiz, Kara Taylor, Adriana De Palma, Franz Essl, Wayne Dawson, Holger Kreft, Jan Pergl, Petr Pyšek, Mark van Kleunen, Patrick Weigelt, Andy Purvis
Software Mentions: 5
Published: over 3 years ago

10.1038/s41598-021-82145-z

Social media reveal ecoregional variation in how weather influences visitor behavior in U.S. National Park Service units
Cited by: 18
Author(s): Emily J. Wilkins, Peter D. Howe, Jordan W. Smith
Software Mentions: 5
Published: over 3 years ago

10.3390/ijerph17082728

Dynamics and Distribution of the Invasive Mosquito Aedes koreicus in a Temperate European City
Cited by: 13
Author(s): Kornélia Kurucz, Mattia Manica, L. Delucchi, Gábor Kemenesi, Giancarlo Marini
Software Mentions: 5
Published: about 4 years ago

10.5811/westjem.2018.4.37054

Geospatial Clustering of Opioid-Related Emergency Medical Services Runs for Public Deployment of Naloxone
Cited by: 19
Author(s): Daniel A. Dworkis, Scott G. Weiner, Vincent T Liao, Danielle Rabickow, Scott A Goldberg
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-017-13828-9

A generalized simulation development approach for predicting refugee destinations
Cited by: 54
Author(s): Diana Suleimenova, David Bell, Derek Groen
Software Mentions: 4
Published: over 6 years ago

10.1038/s41597-020-0542-3

A rasterized building footprint dataset for the United States
Cited by: 28
Author(s): Mehdi P. Heris, Leon Foks, Kenneth J. Bagstad, Austin Troy, Zachary H. Ancona
Software Mentions: 4
Published: almost 4 years ago

10.1038/s41598-017-14978-6

Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities
Cited by: 72
Author(s): Hirotoshi Sato, Yuki Sogo, Hideyuki Doi, Hiroki Yamanaka
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0254254

Seasonal and diel activity patterns of the endangered taiga bean goose (Anser fabalis fabalis) during the breeding season, monitored with camera traps
Cited by: 2
Author(s): Milaja Nykänen, Hannu Pöysä, Sari Hakkarainen, Tiina Rajala, Juho Matala, Mervi Kunnasranta
Software Mentions: 4
Published: almost 3 years ago

10.1038/s41598-018-21553-0

Environmental and anthropogenic factors affecting the increasing occurrence of shark-human interactions around a fast-developing Indian Ocean island
Cited by: 26
Author(s): Erwann Lagabrielle, Agathe Allibert, Jérémy J. Kiszka, Nicolas Loiseau, James P. Kilfoil, Anne Lemahieu
Software Mentions: 4
Published: about 6 years ago

10.3390/insects11070441

Genetic Diversity in Invasive Populations of Argentine Stem Weevil Associated with Adaptation to Biocontrol
Cited by: 11
Author(s): Thomas W. R. Harrop, Marissa F. Le Lec, Ruy Jáuregui, Shannon E. Taylor, Sarah N Inwood, Tracey Van Stijn, Hannah M. Henry, John Skelly, Siva Ganesh, Rachael Ashby, Jeanne M. E. Jacobs, S. L. Goldson, Peter K. Dearden
Software Mentions: 4
Published: almost 4 years ago

10.1038/sdata.2018.89

A collection of public transport network data sets for 25 cities
Cited by: 58
Author(s): Rainer Kujala, Christoffer Weckström, Richard K. Darst, Miloš N. Mladenović, Jari Saramäki
Software Mentions: 4
Published: almost 6 years ago

10.1371/journal.pone.0240706

Breeding and hibernation of captive meadow jumping mice (Zapus hudsonius)
Cited by: 3
Author(s): Ethan A. Brem, Alyssa D. McNulty, William J. Israelsen
Software Mentions: 4
Published: almost 3 years ago

10.1371/journal.pone.0236628

Soundscape of green turtle foraging habitats in Fiji, South Pacific
Cited by: 6
Author(s): Elena Papale, Shritika S. Prakash, Shubha S. Singh, A. Batibasaga, Giuseppa Buscaino, Susanna Piovano
Software Mentions: 4
Published: almost 4 years ago

10.1371/journal.pone.0248622

Mapping urban greenspace use from mobile phone GPS data
Cited by: 12
Author(s): Meghann Mears, Paul J Brindley, Paul D. Barrows, Miles Richardson, Ravi Maheswaran
Software Mentions: 4
Published: almost 3 years ago

10.1371/journal.pone.0222011

Human-induced fire regime shifts during 19th century industrialization: A robust fire regime reconstruction using northern Polish lake sediments
Cited by: 19
Author(s): Elisabeth Dietze, Dariusz Brykała, Laura T. Schreuder, Krzysztof Jażdżewski, Olivier Blarquez, Achim Brauer, Michael Dietze, Milena Obremska, Florian Ott, Anna Pieńczewska, Stefan Schouten, Ellen C. Hopmans, Michael Słowiński
Software Mentions: 4
Published: over 4 years ago

10.1038/s41597-019-0070-1

Inter-urban mobility via cellular position tracking in the southeast Songliao Basin, Northeast China
Cited by: 8
Author(s): Zhanwei Du, Yintang Yang, Zeynep Ertem, Chao Gao, Liping Huang, Qiuyang Huang, Yuan Bai
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.pntd.0008096

Quantifying geographic accessibility to improve efficiency of entomological monitoring
Cited by: 6
Author(s): Joshua Longbottom, Ana Krause, Stephen J. Torr, Michelle C. Stanton
Software Mentions: 4
Published: about 4 years ago

10.3390/vaccines9070731

Sero-Monitoring of Horses Demonstrates the Equivac® HeV Hendra Virus Vaccine to Be Highly Effective in Inducing Neutralising Antibody Titres
Cited by: 8
Author(s): Kim Halpin, Kerryne Graham, Peter A. Durr
Software Mentions: 4
Published: almost 3 years ago

10.1371/journal.pntd.0009450

High incidence of asymptomatic cases during an outbreak of Plasmodium malariae in a remote village of Malaysian Borneo
Cited by: 4
Author(s): Nurul Athirah Naserrudin, Emira Izzati Binti Abdul Aziz, Erdie Aljet, George Mangunji, Bumpei Tojo, Mohammad Saffree Jeffree, Richard Culleton, Kawsar Ahmed
Software Mentions: 4
Published: almost 3 years ago

10.1007/s10661-019-7231-8

Analysing the performance of low-cost air quality sensors, their drivers, relative benefits and calibration in cities—a case study in Sheffield
Cited by: 67
Author(s): Shahid Munir, Martin Mayfield, D. Coca, Stephen A. Jubb, Ogo Osammor
Software Mentions: 4
Published: over 5 years ago

10.1111/1755-0998.12956

Metabarcoding of shrimp stomach content: Harnessing a natural sampler for fish biodiversity monitoring
Cited by: 48
Author(s): Andjin Siegenthaler, Owen S. Wangensteen, Ana Z. Soto, Chiara Benvenuto, Laura Corrigan, Stefano Mariani
Software Mentions: 4
Published: over 5 years ago

10.1038/s42003-020-01356-8

Machine learning enables improved runtime and precision for bio-loggers on seabirds
Cited by: 20
Author(s): Joseph Korpela, Hirokazu Suzuki, S. Matsumoto, Yuichi Mizutani, Masaki Samejima, Taira Maekawa, Junichi Nakai, Ken Yoda
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0204399

Predicting residential structures from open source remotely enumerated data using machine learning
Cited by: 20
Author(s): Hugh J. W. Sturrock, Katelyn Woolheater, Adam Bennett, Ricardo Andrade‐Pacheco, Alemayehu Midekisa
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1008900

A novel allele of ASY3 is associated with greater meiotic stability in autotetraploid Arabidopsis lyrata
Cited by: 25
Author(s): Paul J. Seear, Catherine L. Gregory, Darren Heavens, Roswitha Schmickl, Levi Yant, James D. Higgins
Software Mentions: 4
Published: almost 4 years ago

Projects: cran: OpenStreetMap

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