Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pbio.3000673

https://doi.org/10.1371/journal.pbio.3000673

“Frozen evolution” of an RNA virus suggests accidental release as a potential cause of arbovirus re-emergence

Cited by: 15
Author(s): David Pascall, Kyriaki Nomikou, Emmanuel Bréard, Stéphan Zientara, Ana da Silva Filipe, Bernd Hoffmann, Maude Jacquot, Joshua B. Singer, Kris De Clercq, Anette Bøtner, Corinne Sailleau, Cyril Viarouge, Carrie Batten, Giantonella Puggioni, Ciriaco Ligios, Giovanni Savini, Piet A. van Rijn, Peter Mertens, Roman Biek, Massimo Palmarini
Published: over 4 years ago

Software Mentions 18

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
cran: brms
Bayesian Regression Models using 'Stan'
Papers that mentioned: 316
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: ggmap
Spatial Visualization with ggplot2
Papers that mentioned: 213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: GiRaF
Gibbs Random Fields Analysis
Papers that mentioned: 14
cran: maptools
Tools for Handling Spatial Objects
Papers that mentioned: 269
cran: OpenStreetMap
Access to Open Street Map Raster Images
Papers that mentioned: 1,001
cran: PBSmapping
Mapping Fisheries Data and Spatial Analysis Tools
Papers that mentioned: 11
cran: raster
Geographic Data Analysis and Modeling
Papers that mentioned: 561
cran: rgdal
Bindings for the 'Geospatial' Data Abstraction Library
Papers that mentioned: 328
cran: rgeos
Interface to Geometry Engine - Open Source ('GEOS')
Papers that mentioned: 144
cran: stringr
Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172
cran: tidybayes
Tidy Data and 'Geoms' for Bayesian Models
Papers that mentioned: 21
cran: vcfR
Manipulate and Visualize VCF Data
Papers that mentioned: 62
cran: viridis
Colorblind-Friendly Color Maps for R
Papers that mentioned: 92
pypi: maptools
Manipulate maps
Papers that mentioned: 269
pypi: viridis
Tree data structures and algorithms
Papers that mentioned: 92