cran: GE | Projects | Ecosyste.ms: Papers

10.1093/database/bay027

Maser: one-stop platform for NGS big data from analysis to visualization
Cited by: 38
Author(s): Sonoko Kinjo, Norikazu Monma, Sadahiko Misu, Norikazu Kitamura, Junichi Imoto, Kazutoshi Yoshitake, Takashi Gojobori, Kazuho Ikeo
Software Mentions: 10
Published: over 6 years ago

10.1186/s12862-021-01821-w

Phylogenetic history influences convergence for a specialized ecology: comparative skull morphology of African burrowing skinks (Squamata; Scincidae)
Cited by: 7
Author(s): Natasha Stepanova, Aaron M. Bauer
Software Mentions: 7
Published: about 3 years ago

10.3389/fpsyt.2021.680811

TAPAS: An Open-Source Software Package for Translational Neuromodeling and Computational Psychiatry
Cited by: 55
Author(s): Stefan Frässle, Eduardo A. Aponte, Saskia Bollmann, Kay H. Brodersen, Ting Cao, Olivia K. Harrison, Sarah M. Harrison, Jakob Heinzle, Sandra Iglesias, Lars Kasper, Ekaterina I. Lomakina, Christoph Mathys, Matthias Müller-Schrader, Inês Pereira, Frederike H. Petzschner, Sudhir Raman, Dario Schöbi, Birte Toussaint, Lilian Weber, Yu Yao, Klaas Enno Stephan
Software Mentions: 7
Published: almost 3 years ago

10.1186/s12859-017-1711-z

GRAPE: a pathway template method to characterize tissue-specific functionality from gene expression profiles
Cited by: 8
Author(s): Michael Klein, David F. Stern, Hongyu Zhao
Software Mentions: 7
Published: almost 7 years ago

10.1186/s12918-015-0211-x

Integrating genetics and epigenetics in breast cancer: biological insights, experimental, computational methods and therapeutic potential
Cited by: 41
Author(s): Claudia Cava, Gloria Bertoli, Isabella Castiglioni
Software Mentions: 6
Published: over 8 years ago

10.1186/s12859-016-1438-2

iGC—an integrated analysis package of gene expression and copy number alteration
Cited by: 13
Author(s): Yi-Pin Lai, Liang-Bo Wang, Weian Wang, Liang‐Chuan Lai, Mong‐Hsun Tsai, Tzu-Pin Lu, Eric Y. Chuang
Software Mentions: 6
Published: over 7 years ago

10.1038/s41598-020-69298-z

Standardization of brain MR images across machines and protocols: bridging the gap for MRI-based radiomics
Cited by: 121
Author(s): Alexandre Carré, G. Klausner, Myriam Edjlali, Marvin Lerousseau, Jade Briend-Diop, Roger Sun, Samy Ammari, Sylvain Reuzé, É. Alvarez Andres, Théo Estienne, S. Niyoteka, Enzo Battistella, Maria Vakalopoulou, Frédéric Dhermain, Nikos Paragios, Éric Deutsch, Catherine Oppenheim, Johan Pallud, Charlotte Robert
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12870-019-1685-2

Non-linear regression models for time to flowering in wild chickpea combine genetic and climatic factors
Cited by: 15
Author(s): Konstantin Kozlov, A. K. Singh, Jens Berger, Eric J. B. von Wettberg, Abdullah Kahraman, Abdulkadir Aydoğan, Douglas R. Cook, Sergey V. Nuzhdin, Maria Samsonova
Software Mentions: 5
Published: about 5 years ago

10.1099/mgen.0.000122

Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
Cited by: 9
Author(s): Kelly Robinson, Aziah S. Hawkins, Ivette Santana-Cruz, Ricky S. Adkins, Amol C. Shetty, Sushma Nagaraj, Lisa Sadzewicz, Luke J. Tallon, David A. Rasko, Claire M. Fraser, Anup Mahurkar, Joana C. Silva, Julie C. Dunning Hotopp
Software Mentions: 5
Published: over 6 years ago

10.7554/eLife.66926

Rampant tooth loss across 200 million years of frog evolution
Cited by: 11
Author(s): Daniel J. Paluh, Karina Riddell, Catherine Early, Maggie M. Hantak, Gregory F.M. Jongsma, Rachel Keeffe, Fernanda Magalhães Silva, Stuart V. Nielsen, María Camila Vallejo-Pareja, Edward L. Stanley, David C. Blackburn
Software Mentions: 4
Published: almost 3 years ago

10.1002/btm2.10232

Targeting thymidine phosphorylase as a potential therapy for bone loss associated with periprosthetic osteolysis
Cited by: 11
Author(s): Gen Matsumae, Tomohiro Shimizu, Yuan Tian, Daisuke Takahashi, Taku Ebata, Hend Alhasan, Shunichi Yokota, Ken Kadoya, Mohamad Alaa Terkawi, Norimasa Iwasaki
Software Mentions: 4
Published: almost 3 years ago

10.1002/advs.201902312

CRISPR/Cas Systems in Genome Editing: Methodologies and Tools for sgRNA Design, Off‐Target Evaluation, and Strategies to Mitigate Off‐Target Effects
Cited by: 136
Author(s): Hakim Manghwar, Bo Li, Xiao Ding, Amjad Hussain, Keith Lindsey, Xianlong Zhang, Shuangxia Jin
Software Mentions: 4
Published: over 4 years ago

10.1155/2013/169526

SIVIC: Open-Source, Standards-Based Software for DICOM MR Spectroscopy Workflows
Cited by: 70
Author(s): Jason C. Crane, Marram P. Olson, Sarah J. Nelson
Software Mentions: 4
Published: over 11 years ago

10.1371/journal.pone.0209313

Mangroves in the Galapagos islands: Distribution and dynamics
Cited by: 16
Author(s): Nicolás Moity, Byron Delgado, Pelayo Salinas‐de‐León
Software Mentions: 4
Published: over 5 years ago

10.1111/pbi.13579

Alternative splicing dynamics and evolutionary divergence during embryogenesis in wheat species
Cited by: 22
Author(s): Peng Gao, Teagen D. Quilichini, Chun Zhai, Li Qin, Kirby T. Nilsen, Qiang Li, Andrew Sharpe, Leon V. Kochian, Jitao Zou, Anireddy S. N. Reddy, Yangdou Wei, Curtis Pozniak, N. A. Patterson, C. Stewart Gillmor, Raju Datla, Daoquan Xiang
Software Mentions: 4
Published: about 3 years ago

10.1155/2014/346074

MAVTgsa: An R Package for Gene Set (Enrichment) Analysis
Cited by: 5
Author(s): Chih-Yi Chien, Ching‐Wei Chang, Chen‐An Tsai, James J. Chen
Software Mentions: 4
Published: over 10 years ago

10.3389/fpsyt.2021.682495

Common Data Elements, Scalable Data Management Infrastructure, and Analytics Workflows for Large-Scale Neuroimaging Studies
Cited by: 4
Author(s): Rayus Kuplicki, James Touthang, Obada Al Zoubi, Ahmad Mayeli, Masaya Misaki, NeuroMAP-Investigators, Robin L. Aupperle, T. Kent Teague, Brett A. McKinney, Martin P. Paulus, Jerzy Bodurka
Software Mentions: 4
Published: almost 3 years ago

10.1186/s13326-016-0059-z

Active learning for ontological event extraction incorporating named entity recognition and unknown word handling
Cited by: 5
Author(s): Xu Han, Jung‐Jae Kim, Chee Keong Kwoh
Software Mentions: 4
Published: about 8 years ago

10.1186/s12859-019-3085-x

Virtual Grid Engine: a simulated grid engine environment for large-scale supercomputers
Cited by: 0
Author(s): Satoshi Ito, Masaaki Yadome, Tatsuo Nishiki, Shigeru Ishiduki, Hikaru Inoue, Rui Yamaguchi, Satoru Miyano
Software Mentions: 4
Published: over 4 years ago

10.7554/eLife.57468

Plasticity and evolutionary convergence in the locomotor skeleton of Greater Antillean Anolis lizards
Cited by: 9
Author(s): Nathalie Feiner, Illiam S. C. Jackson, Kirke L. Munch, Reinder Radersma, Tobias Uller
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-019-44661-x

The ion channels and transporters gene expression profile indicates a shift in excitability and metabolisms during malignant progression of Follicular Lymphoma
Cited by: 18
Author(s): Alberto Magi, Marika Masselli, Cesare Sala, Angela Guerriero, Pasquale Laise, Benedetta Puccini, Luigi Rigacci, C Breschi, Olivia Crociani, Serena Pillozzi, Annarosa Arcangeli
Software Mentions: 3
Published: almost 5 years ago

10.1155/2016/7536494

A Novel Sample Selection Strategy for Imbalanced Data of Biomedical Event Extraction with Joint Scoring Mechanism
Cited by: 1
Author(s): Yang Lü, Xiaolei Ma, Yinan Lu, Yunxuan Zhou, Zhili Pei
Software Mentions: 3
Published: over 8 years ago

10.1186/1471-2105-11-469

MetNetGE: interactive views of biological networks and ontologies
Cited by: 8
Author(s): Mingxing Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin Wurtele, Julie A. Dickerson
Software Mentions: 3
Published: over 13 years ago

10.3390/ijms21239162

Bringing New Methods to the Seed Proteomics Platform: Challenges and Perspectives
Cited by: 18
Author(s): Galina Smolikova, Daria Gorbach, Elena Lukasheva, Gregory Mavropolo-Stolyarenko, Tatiana Bilova, Alena Soboleva, Alexander Tsarev, E. V. Romanovskaya, Е. P. Podolskaya, Vladimir A. Zhukov, И. А. Тихонович, С.С. Медведев, Wolfgang Hoehenwarter, Andrej Frolov
Software Mentions: 3
Published: over 3 years ago

10.1186/1471-2164-13-346

Integrative analysis of single nucleotide polymorphisms and gene expression efficiently distinguishes samples from closely related ethnic populations
Cited by: 11
Author(s): Hsin-Chou Yang, Peili Wang, Chien‐Wei Lin, Chien-Hsiun Chen, Chun-Houh Chen
Software Mentions: 3
Published: over 12 years ago

10.3389/fnbot.2016.00006

Design of Spiking Central Pattern Generators for Multiple Locomotion Gaits in Hexapod Robots by Christiansen Grammar Evolution
Cited by: 20
Author(s): Andrés Espinal, Horacio Rostro-González, Martín Carpio, Erick Israel Guerra-Hernandez, Manuel Ornelas-Rodríguez, Marco Aurelio Sotelo-Figueroa
Software Mentions: 3
Published: almost 8 years ago

10.1186/s12916-021-01962-1

Functional connectivity changes in cerebral small vessel disease - a systematic review of the resting-state MRI literature
Cited by: 22
Author(s): Maximilian Schulz, Caroline Malherbe, Bastian Cheng, Götz Thomalla, Eckhard Schlemm
Software Mentions: 3
Published: about 3 years ago

10.1186/1471-2105-16-S16-S3

Application of the EVEX resource to event extraction and network construction: Shared Task entry and result analysis
Cited by: 8
Author(s): Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter
Software Mentions: 3
Published: over 8 years ago

10.1186/1471-2105-13-S4-S16

Intuitive representation of surface properties of biomolecules using BioBlender
Cited by: 59
Author(s): Raluca Andrei, Marco Callieri, Maria Francesca Zini, Tiziana Loni, Giuseppe Maraziti, Mike Pan, Monica Zoppè
Software Mentions: 3
Published: about 12 years ago

10.1371/journal.pcbi.1007245

The impact of DNA methylation on the cancer proteome
Cited by: 8
Author(s): Majed Mohamed Magzoub, Marcos Prunello, Kevin Brennan, Olivier Gevaert
Software Mentions: 3
Published: almost 5 years ago

10.1038/srep46443

Simulated climate effects of desert irrigation geoengineering
Cited by: 10
Author(s): Wei Cheng, John C. Moore, Long Cao, Duoying Ji, Liyun Zhao
Software Mentions: 3
Published: about 7 years ago

10.1186/s12711-018-0389-7

The impact of genome editing on the introduction of monogenic traits in livestock
Cited by: 20
Author(s): J.W.M. Bastiaansen, H. Bovenhuis, Martien A. M. Groenen, Hendrik Jan Megens, H.A. Mulder
Software Mentions: 3
Published: about 6 years ago

10.1186/s13014-020-1461-3

Dosimetric benefit of an adaptive treatment by means of plan selection for rectal cancer patients in both short and long course radiation therapy
Cited by: 11
Author(s): Rianne de Jong, Jelle Visser, K. Crama, N. Van Wieringen, J. Wiersma, Elisabeth D. Geijsen, Arjan Bel
Software Mentions: 3
Published: over 4 years ago

10.3389/fonc.2020.01646

Ultrasound-Based Radiomics Analysis for Preoperatively Predicting Different Histopathological Subtypes of Primary Liver Cancer
Cited by: 33
Author(s): Yung-Hsing Peng, Peng Lin, Linyong Wu, Da Wan, Yujia Zhao, Li Liang, Xin Ma, Hui Qin, Yichen Liu, Xin Li, Xinrong Wang, Yun He, Hong Yang
Software Mentions: 3
Published: over 3 years ago

10.1534/g3.119.400493

Deep Kernel for Genomic and Near Infrared Predictions in Multi-environment Breeding Trials
Cited by: 53
Author(s): Jaime Cuevas, Osval A. Montesinos-L֯ópez, Philomin Juliana, Carlos Guzmán, Paulino Pérez‐Rodríguez, José González-Bucio, Juan Burgueño, Abelardo Montesinos‐López, J. Crossa
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0224446

Gene expression based survival prediction for cancer patients—A topic modeling approach
Cited by: 9
Author(s): Luke Kumar, Russell Greiner
Software Mentions: 3
Published: over 4 years ago

10.7554/eLife.62589

Integrated transcriptomic and neuroimaging brain model decodes biological mechanisms in aging and Alzheimer’s disease
Cited by: 13
Author(s): Quadri Adewale, Ahmed Faraz Khan, Félix Carbonell, Yasser Iturria-Medina, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 2
Published: about 3 years ago

10.3390/ijms21186724

HisCoM-G×E: Hierarchical Structural Component Analysis of Gene-Based Gene–Environment Interactions
Cited by: 2
Author(s): Sungkyoung Choi, Sung Young Lee, Iksoo Huh, Heungsun Hwang, Taesung Park
Software Mentions: 2
Published: over 3 years ago

10.1155/2018/6192483

Mechanical Thrombectomy by a Direct Aspiration First Pass Technique (ADAPT) in Ischemic Stroke: Results of Monocentric Study Based on Multimodal CT Patient Selection
Cited by: 6
Author(s): Giuseppe Guzzardi, Bruno Del Sette, Carmelo Stanca, Andrea Galbiati, Massimiliano Cernigliaro, Alessandro Carriero, Alessandro Stecco
Software Mentions: 2
Published: over 5 years ago

10.3390/s21062046

Exploring Signals on L5/E5a/B2a for Dual-Frequency GNSS Precise Point Positioning
Cited by: 5
Author(s): Nacer Naciri, André Hauschild, Sunil Bisnath
Software Mentions: 2
Published: about 3 years ago

10.1155/2017/3053759

Safety of Allogeneic Canine Adipose Tissue-Derived Mesenchymal Stem Cell Intraspinal Transplantation in Dogs with Chronic Spinal Cord Injury
Cited by: 27
Author(s): Cláudia Cardoso Maciel Escalhão, Isalira Peroba Ramos, Camila Hochman‐Mendez, Taís Hanae Kasai-Brunswick, Sérgio Augusto Lopes de Souza, Bianca Gutfilen, Regina Coeli dos Santos Goldenberg, Tatiana Coelho‐Sampaio
Software Mentions: 2
Published: over 7 years ago

10.1186/1476-072X-13-52

The SPOTLIGHT virtual audit tool: a valid and reliable tool to assess obesogenic characteristics of the built environment
Cited by: 87
Author(s): John R. Bethlehem, Joreintje D. Mackenbach, Maher Ben-Rebah, Sofie Compernolle, Ketevan Glonti, Helga Bárdos, Harry Rutter, Hélène Charreire, Jean Michel Oppert, Johannes Brug, Jeroen Lakerveld
Software Mentions: 2
Published: over 10 years ago

10.1186/1471-2105-15-130

BicSPAM: flexible biclustering using sequential patterns
Cited by: 37
Author(s): Rui Henriques, Sara C. Madeira
Software Mentions: 2
Published: about 10 years ago

10.1038/s41598-019-43299-z

Supervised Domain Adaptation for Automatic Sub-cortical Brain Structure Segmentation with Minimal User Interaction
Cited by: 39
Author(s): Kaisar Kushibar, Sergi Valverde, Sandra González-Villà, José Bernal, Mariano Cabezas, Arnau Oliver, Xavier Lladó
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-021-92537-w

Deterministic and stochastic modelling of impacts from genomic selection and phenomics on genetic gain for perennial ryegrass dry matter yield
Cited by: 3
Author(s): M. Z. Z. Jahufer, Sai Krishna Arojju, Marty J. Faville, Kioumars Ghamkhar, Dongwen Luo, Vivi N. Arief, Wen-Hsi Yang, Mingzhu Sun, I. H. DeLacy, Andrew G. Griffiths, Colin Eady, Will Clayton, Alan V. Stewart, Richard George, Valerio Hoyos‐Villegas, K. E. Basford, Brent Barrett
Software Mentions: 2
Published: almost 3 years ago

10.1007/s13238-016-0302-5

The superior fault tolerance of artificial neural network training with a fault/noise injection-based genetic algorithm
Cited by: 17
Author(s): Feng Su, Pingzhi Yuan, Yangzhen Wang, Chen Zhang
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep31478

Histological response of soda-lime glass-ceramic bactericidal rods implanted in the jaws of beagle dogs
Cited by: 8
Author(s): José S. Moya, A. Martínez, Roberto López‐Píriz, Francisco Guitián, Luis A. Díaz, Leticia Esteban-Tejeda, Belén Cabal, F. Sket, Elisa Fernández-García, Antoni P. Tomsia, Ramón Torrecillas
Software Mentions: 2
Published: almost 8 years ago

10.3390/polym8050170

Highly Concentrated Alginate-Gellan Gum Composites for 3D Plotting of Complex Tissue Engineering Scaffolds
Cited by: 51
Author(s): Ashwini Rahul Akkineni, Tilman Ahlfeld, Alexander Funk, Anja Waske, Anja Lode, Michael Gelinsky
Software Mentions: 2
Published: about 8 years ago

10.1186/1471-2105-16-S10-S1

Overview of the gene regulation network and the bacteria biotope tasks in BioNLP'13 shared task
Cited by: 29
Author(s): Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Dialekti Valsamou, Philippe Bessières, Claire Nédellec
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.ppat.1007024

Glycoengineering HIV-1 Env creates ‘supercharged’ and ‘hybrid’ glycans to increase neutralizing antibody potency, breadth and saturation
Cited by: 19
Author(s): Ema T. Crooks, Samantha L. Grimley, Michelle D. Cully, Keiko Osawa, Gillian Dekkers, Kevin O. Saunders, Sebastian Rämisch, Sergey Menis, William R. Schief, Nicole A. Doria‐Rose, Barton F. Haynes, Ben Murrell, Evan M. Cale, Amarendra Pegu, John R. Mascola, Gestur Vidarsson, James Μ. Binley
Software Mentions: 2
Published: about 6 years ago

10.1098/rspb.2021.0226

A highly conserved ontogenetic limb allometry and its evolutionary significance in the adaptive radiation of Anolis lizards
Cited by: 10
Author(s): Nathalie Feiner, Illiam S. C. Jackson, Eliane Van der Cruyssen, Tobias Uller
Software Mentions: 2
Published: almost 3 years ago

10.3390/s18041288

Evolutionary Design of Convolutional Neural Networks for Human Activity Recognition in Sensor-Rich Environments
Cited by: 26
Author(s): Alejandro Baldominos, Yago Sáez, Pedro Isasi
Software Mentions: 2
Published: about 6 years ago

10.1155/2019/7910602

Research on Association of the Diameter of the Internal Carotid Artery Siphon and Nonarteritic Anterior Ischaemic Optic Neuropathy
Cited by: 4
Author(s): Zhiyong Fu, Hongyang Li, Wei Wang, Yanling Wang
Software Mentions: 2
Published: over 4 years ago

10.1002/acm2.12363

Applying three different methods of measuring CTDI free air to the extended CTDI formalism for wide-beam scanners (IEC 60601-2-44): A comparative study
Cited by: 6
Author(s): Robert Bujila, Love Kull, Mats Danielsson, Jonas Andersson
Software Mentions: 2
Published: almost 6 years ago

10.1186/s12859-019-2667-y

Predicting blood pressure from physiological index data using the SVR algorithm
Cited by: 24
Author(s): Bing Zhang, Huihui Ren, Guoyan Huang, Yongqiang Cheng, Changzhen Hu
Software Mentions: 2
Published: about 5 years ago

10.1002/acm2.13167

Vendor‐independent skin dose mapping application for interventional radiology and cardiology
Cited by: 5
Author(s): Marko Krajinović, Nikola Kržanović, Olivera Ciraj-Bjelac
Software Mentions: 2
Published: over 3 years ago

10.3389/fpls.2021.672017

Identification of Glutathione S-Transferase Genes in Hami Melon (Cucumis melo var. saccharinus) and Their Expression Analysis Under Cold Stress
Cited by: 12
Author(s): Wen Song, Fake Zhou, Chunhui Shan, Qin Zhang, Ming Ning, Xiumin Liu, Xinxin Zhao, Wenchao Cai, Xinquan Yang, Guangfei Hao, Fengxian Tang
Software Mentions: 2
Published: almost 3 years ago

10.3390/toxins13070504

Effect of Different Species of Prorocentrum Genus on the Japanese Oyster Crassostrea gigas Proteomic Profile
Cited by: 1
Author(s): Miguel Ángel Matus-Hernández, Norma Yolanda Hernández Saavedra
Software Mentions: 2
Published: almost 3 years ago

10.3389/fnins.2013.00229

Coding of level of ambiguity within neural systems mediating choice
Cited by: 15
Author(s): Dan Lopez-Paniagua, Carol A. Seger
Software Mentions: 2
Published: over 11 years ago

10.3389/fnins.2021.608808

Transductive Transfer Learning for Domain Adaptation in Brain Magnetic Resonance Image Segmentation
Cited by: 3
Author(s): Kaisar Kushibar, Mostafa Salem, Sergi Valverde, Àlex Rovira, Joaquím Salvi, Arnau Oliver, Xavier Lladó
Software Mentions: 2
Published: about 3 years ago

10.15252/embr.201949248

Small‐molecule inhibition of aging‐associated chromosomal instability delays cellular senescence
Cited by: 24
Author(s): Monika Barroso-Vilares, Joana Catarina Macedo, Mário Reis, Jessica D Warren, Duane A. Compton, Elsa Logarinho
Software Mentions: 2
Published: about 4 years ago

10.1007/s10237-018-1028-5

In vivo estimation of elastic heterogeneity in an infarcted human heart
Cited by: 17
Author(s): Gabriel Balaban, Henrik Finsberg, Simon W. Funke, Trine Synnøve Fink Håland, Einar Hopp, Joakim Sundnes, Samuel Wall, Marie E. Rognes
Software Mentions: 2
Published: about 6 years ago

10.1186/s13550-020-00737-8

Clinical implementation of PLANET® Dose for dosimetric assessment after [177Lu]Lu-DOTA-TATE: comparison with Dosimetry Toolkit® and OLINDA/EXM® V1.0
Cited by: 12
Author(s): Lore Santoro, Laurine Pitalot, Dorian Trauchessec, Erick Mora‐Ramirez, Pierre‐Olivier Kotzki, Manuel Bardiès, Emmanuel Deshayes
Software Mentions: 2
Published: over 3 years ago

10.1002/ece3.5947

Genetic diversity of Helosciadium repens (Jacq.) W.D.J. Koch (Apiaceae) in Germany, a Crop Wild Relative of celery
Cited by: 5
Author(s): Tobias Herden, Maria Bönisch, Nikolai Friesen
Software Mentions: 2
Published: over 4 years ago

10.7759/cureus.9040

Precordial ECG Lead Mispositioning: Its Incidence and Estimated Cost to Healthcare
Cited by: 1
Author(s): Mahin Rehman, Najeeb Ur Rehman
Software Mentions: 2
Published: almost 4 years ago

10.1038/s42003-021-02387-5

Structures of the ApoL1 and ApoL2 N-terminal domains reveal a non-classical four-helix bundle motif
Cited by: 5
Author(s): Mark Ultsch, Michael J. Holliday, Stefan Gerhardy, Paul Moran, Suzie J. Scales, Nidhi Gupta, Francesca Oltrabella, Cecilia Chiu, Wayne J. Fairbrother, Charles Eigenbrot, Daniel Kirchhofer
Software Mentions: 2
Published: almost 3 years ago

10.5935/abc.20180058

Frequency of Subclinical Atherosclerosis in Brazilian HIV-Infected Patients
Cited by: 5
Author(s): Péricles Sidnei Salmazo, Silméia Garcia Zanati Bazan, Flávio Gobbis Shiraishi, Rodrigo Bazan, Katashi Okoshi, João Carlos Hueb
Software Mentions: 2
Published: over 6 years ago

10.1186/1532-429X-12-4

Hemodynamic predictors of aortic dilatation in bicuspid aortic valve by velocity-encoded cardiovascular magnetic resonance
Cited by: 118
Author(s): P Martijn den Reijer, Denver Sallee, Petra van der Velden, Eline R Zaaijer, W. James Parks, Senthil Ramamurthy, Trevor Q Robbie, Giorgina Donati, Carey Lamphier, R. P. Beekman, Marijn E. Brummer
Software Mentions: 2
Published: over 14 years ago

10.1371/journal.pone.0187754

Personalized blood glucose prediction: A hybrid approach using grammatical evolution and physiological models
Cited by: 54
Author(s): Iván Contreras, Silvia Oviedo, Martina Vettoretti, Roberto Visentin, Josep Vehı́
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0018914

BOLD Temporal Dynamics of Rat Superior Colliculus and Lateral Geniculate Nucleus following Short Duration Visual Stimulation
Cited by: 34
Author(s): Condon Lau, Iris Y. Zhou, Matthew M. Cheung, Kevin C. Chan, Ed X. Wu
Software Mentions: 2
Published: about 13 years ago

10.1371/journal.pone.0142823

Genetics, Morphology, Advertisement Calls, and Historical Records Distinguish Six New Polyploid Species of African Clawed Frog (Xenopus, Pipidae) from West and Central Africa
Cited by: 72
Author(s): Ben Evans, Timothy F. Carter, Eli Greenbaum, Václav Gvoždík, Darcy B. Kelley, Patrick J. McLaughlin, Olivier S. G. Pauwels, Daniel M. Portik, Edward L. Stanley, R. C. Tinsley, Martha L. Tobias, David C. Blackburn
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0233423

Distribution of ascariasis, trichuriasis and hookworm infections in Ogun State, Southwestern Nigeria
Cited by: 12
Author(s): Hammed Oladeji Mogaji, G. A. Dedeke, Babatunde Saheed Bada, Samuel Bankole, Adejuwon Adeniji, Mariam Tobi Fagbenro, Olaitan Olamide Omitola, Akinola Stephen Oluwole, Nnayere Simon Odoemene, Eniola Michael Abe, C. F. Mafiana, Uwem Friday Ekpo
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0246848

Evaluation of qualitative and quantitative data of Y-90 imaging in SPECT/CT and PET/CT phantom studies
Cited by: 8
Author(s): Agata Kubik, Anna Budzyńska, Krzysztof Kacperski, Maciej Maciak, Michał Kuć, Piotr Piasecki, Maciej Wiliński, Marcin Konior, Mirosław Dziuk, E. Iller
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0097615

How Subtle Is the “Terroir” Effect? Chemistry-Related Signatures of Two “Climats de Bourgogne”
Cited by: 55
Author(s): Chloé Roullier-Gall, Marianna Lucio, Laurence Noret, Philippe Schmitt‐Kopplin, Régis D. Gougeon
Software Mentions: 2
Published: almost 10 years ago

10.1007/s11682-020-00355-x

Interactive mapping of language and memory with the GE2REC protocol
Cited by: 2
Author(s): Sonja Banjac, Elise Roger, Émilie Cousin, Marcela Perrone‐Bertolotti, Célise Haldin, Cédric Pichat, Laurent Lamalle, Lorella Minotti, Philippe Kahane, Monica Baciu
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0119986

Spatial, Temporal, and Density-Dependent Components of Habitat Quality for a Desert Owl
Cited by: 5
Author(s): Aaron D. Flesch, Richard L. Hutto, Willem J. D. van Leeuwen, Kyle Hartfield, Sky Jacobs
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0186273

Further insight into genetic variation and haplotype diversity of Cherry virus A from China
Cited by: 9
Author(s): Rui Gao, Yunxiao Xu, Thierry Candresse, Zhen He, Shifang Li, Yuxin Ma, Meiguang Lu
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0187407

Structural connectivity at a national scale: Wildlife corridors in Tanzania
Cited by: 48
Author(s): Jason Riggio, Timothy Caro
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0141151

Wavelet Domain Radiofrequency Pulse Design Applied to Magnetic Resonance Imaging
Cited by: 4
Author(s): Andrew Michael Huettner, Nikolai J. Mickevicius, Ali Ersoz, Kevin M. Koch, L. Tugan Muftuler, Andrew S. Nencka
Software Mentions: 2
Published: over 8 years ago

10.3390/cancers13092269

Prediction of Human Papillomavirus (HPV) Association of Oropharyngeal Cancer (OPC) Using Radiomics: The Impact of the Variation of CT Scanner
Cited by: 7
Author(s): Reza Reiazi, Colin Arrowsmith, Mattea Welch, Farnoosh Abbas‐Aghababazadeh, Christopher Eeles, Tony Tadic, Andrew Hope, Scott V. Bratman, Benjamin Haibe‐Kains
Software Mentions: 2
Published: about 3 years ago

10.1016/j.xplc.2019.100005

Enhancing Genetic Gain through Genomic Selection: From Livestock to Plants
Cited by: 126
Author(s): Yunbi Xu, Xiaogang Liu, Junjie Fu, Hongwu Wang, Jiankang Wang, Changling Huang, B. M. Prasanna, Michael Olsen, Guoying Wang, Aimin Zhang
Software Mentions: 2
Published: over 4 years ago

10.1155/2013/647548

Automatic Vertebral Column Extraction by Whole-Body Bone SPECT Scan
Cited by: 1
Author(s): Sheng Huang, Hao Yu Chao, Pan-Fu Kao, Wei Shen, Yu Hsiang Chou, Shu Hsin Liu
Software Mentions: 2
Published: over 11 years ago

10.1186/1471-2105-16-S10-S3

Extending the evaluation of Genia Event task toward knowledge base construction and comparison to Gene Regulation Ontology task
Cited by: 18
Author(s): Jin-Dong Kim, Jung‐Jae Kim, Xu Han, Dietrich Rebholz‐Schuhmann
Software Mentions: 2
Published: almost 9 years ago

10.1186/s40658-020-0278-3

Variability in lutetium-177 SPECT quantification between different state-of-the-art SPECT/CT systems
Cited by: 28
Author(s): Steffie M B Peters, Sebastiaan L Meyer Viol, Niels R van der Werf, Nick de Jong, Floris H. P. van Velden, Antoi P.W. Meeuwis, Mark Konijnenberg, Martin Gotthardt, Hugo W. A. M. de Jong, Marcel Segbers
Software Mentions: 2
Published: over 4 years ago

10.1186/s12947-017-0116-5

Comparison of strain parameters in dyssynchronous heart failure between speckle tracking echocardiography vendor systems
Cited by: 18
Author(s): Wouter M. van Everdingen, Alexander H. Maass, Kevin Vernooy, Mathias Meine, Cornelis P. Allaart, Frederik J. de Lange, Arco J. Teske, Bastiaan Geelhoed, Michiel Rienstra, Isabelle C. Van Gelder, Marc A. Vos, Maarten J. Cramer
Software Mentions: 2
Published: over 6 years ago

10.1186/1755-8794-1-10

Identification of differentially expressed genes in fibroblasts derived from patients with Dupuytren's Contracture
Cited by: 56
Author(s): Latha Satish, William A. LaFramboise, David B. O’Gorman, Sharon L. Johnson, Benjamin Janto, Bing Siang Gan, Mark E. Baratz, Fang Hu, J. Christopher Post, Garth D. Ehrlich, Sandeep Kathju
Software Mentions: 2
Published: about 16 years ago

10.7717/peerj.8526

A taxonomic revision of the south-eastern dragon lizards of the Smaug warreni (Boulenger) species complex in southern Africa, with the description of a new species (Squamata: Cordylidae)
Cited by: 0
Author(s): Michael F. Bates, Edward L. Stanley
Software Mentions: 2
Published: about 4 years ago

10.3390/molecules25112472

White Matter Brain Network Research in Alzheimer’s Disease Using Persistent Features
Cited by: 11
Author(s): Liqun Kuang, Yan Gao, Zhongyu Chen, Jiacheng Xing, Fengguang Xiong, And Xie Han
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12906-021-03381-4

Effects of resveratrol supplementation on bone quality: a systematic review and meta-analysis of randomized controlled trials
Cited by: 6
Author(s): Qiangqiang Li, Guozi Yang, Hongtao Xu, Shaowen Tang, Wayne Lee
Software Mentions: 2
Published: over 2 years ago

10.7717/peerj.3603

Two new species of the Brachycephaluspernix group (Anura: Brachycephalidae) from the state of Paraná, southern Brazil
Cited by: 20
Author(s): Luiz Fernando Ribeiro, David C. Blackburn, Edward L. Stanley, Márcio R. Pie, Marcos R. Bornschein
Software Mentions: 2
Published: almost 7 years ago

10.1186/1471-2105-11-524

A genetic ensemble approach for gene-gene interaction identification
Cited by: 21
Author(s): Pengyi Yang, Joshua W. K. Ho, Albert Y. Zomaya, Bing Bing Zhou
Software Mentions: 2
Published: over 13 years ago

10.3390/ma9080668

Micro-Tomographic Investigation of Ice and Clathrate Formation and Decomposition under Thermodynamic Monitoring
Cited by: 4
Author(s): Stefan Arzbacher, Joerg Petrasch, Alexander Ostermann, Thomas Loerting
Software Mentions: 2
Published: almost 8 years ago

10.1186/s12263-018-0598-2

Effect of β-hydroxy-β-methylbutyrate on miRNA expression in differentiating equine satellite cells exposed to hydrogen peroxide
Cited by: 3
Author(s): Karolina A. Chodkowska, Anna Ciecierska, Kinga Majchrzak, Paweł Ostaszewski, Tomasz Sadkowski
Software Mentions: 2
Published: about 6 years ago

10.7717/peerj.11900

IdentPMP: identification of moonlighting proteins in plants using sequence-based learning models
Cited by: 3
Author(s): Xinyi Liu, Yueyue Shen, Youhua Zhang, Fei Liu, Zhiyu Ma, Z.Q. Yue, Yi Yue
Software Mentions: 2
Published: almost 3 years ago

10.1371/journal.pone.0250089

Reliability of left atrial strain reference values: A 3D echocardiographic study
Cited by: 9
Author(s): Yosuke Nabeshima, Tetsuji Kitano, Masaaki Takeuchi
Software Mentions: 2
Published: about 3 years ago

10.1016/j.jocd.2020.12.004

The Importance of Hydration in Body Composition Assessment in Children Aged 6-16 Years
Cited by: 6
Author(s): Laura Watson, Katherine S. Carr, Elise R. Orford, Michelle C. Venables
Software Mentions: 2
Published: almost 3 years ago

10.1186/s12891-019-2562-8

Musculoskeletal application and validation of speckle-tracking ultrasonography
Cited by: 13
Author(s): Lars Henrik Frich, Kate Lykke Lambertsen, John Hjarbæk, Jordi S. Dahl, Anders Holsgaard-Larsen
Software Mentions: 2
Published: about 5 years ago

10.1016/j.cell.2017.06.025

Development of a Novel Lead that Targets M. tuberculosis Polyketide Synthase 13
Cited by: 115
Author(s): Anup Aggarwal, Maloy Kumar Parai, N.D. Shetty, Deeann Wallis, Lisa K. Woolhiser, Courtney Hastings, Noton K. Dutta, Stacy Galaviz, Ramesh Dhakal, Rupesh Shrestha, Shoko Wakabayashi, Chris Walpole, David J. Matthews, David M. Floyd, Paul Scullion, Jennifer Riley, Ola Epemolu, Suzanne Norval, Thomas Snavely, Gregory T. Robertson, Eric J. Rubín, Thomas R. Ioerger, F A Sirgel, Ruben van der Merwe, Paul D. van Helden, Peter M. Keller, Erik C. Böttger, Petros C. Karakousis, Anne J. Lenaerts, James C. Sacchettini
Software Mentions: 2
Published: almost 7 years ago

10.1186/1532-429X-14-66

Cardiovascular magnetic resonance physics for clinicians: part II
Cited by: 146
Author(s): John Biglands, Aleksandra Radjenovic, John P. Ridgway
Software Mentions: 2
Published: over 11 years ago

10.18632/oncotarget.18001

Optimizing a machine learning based glioma grading system using multi-parametric MRI histogram and texture features
Cited by: 96
Author(s): Xin Zhang, Lin‐Feng Yan, Yu-Chuan Hu, Gang Li, Yang Yang, Yu Han, Ying-Zhi Sun, Zhicheng Liu, Qiang Tian, Ziyang Han, Le-De Liu, Bin-Quan Hu, Zi-Yu Qiu, Wen Wang, Guangbin Cui
Software Mentions: 2
Published: about 7 years ago

Projects: cran: GE

Papers Mentioning GE 401