pypi: Poly | Projects | Ecosyste.ms: Papers

10.1534/g3.119.400273

DPAC: A Tool for Differential Poly(A)–Cluster Usage from Poly(A)–Targeted RNAseq Data
Cited by: 16
Author(s): Andrew Routh
Software Mentions: 6
Published: over 5 years ago

<scp>GABA<sub>A</sub></scp>receptors can initiate the formation of functional inhibitory<scp>GABA</scp>ergic synapses
Cited by: 33
Author(s): Céline Fuchs, Karine Abitbol, Jemima J. Burden, Audrey Mercer, Laura E. Brown, Jonathan Iball, F. Anne Stephenson, Alex M. Thomson, Jasmina N. Jovanovic
Software Mentions: 4
Published: over 11 years ago

10.7717/peerj.11724

Genomics pipelines to investigate susceptibility in whole genome and exome sequenced data for variant discovery, annotation, prediction and genotyping
Cited by: 11
Author(s): Zeeshan Ahmed, Eduard Gibert Renart, Saman Zeeshan
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0245687

The Epidemiology of first and second-line drug-resistance Mycobacterium tuberculosis complex common species: Evidence from selected TB treatment initiating centers in Ethiopia
Cited by: 11
Author(s): Biniyam Dagne, Kassu Desta, Rahel Fekade, Misikir Amare, Mekonnen Tadesse, Getu Diriba, Betselot Zerihun, Melak Getu, Waganeh Sinshaw, Getachew Seid, Dinka Fekadu Gamtesa, Gebeyehu Assefa, Ayinalem Alemu
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12864-019-5536-1

ImtRDB: a database and software for mitochondrial imperfect interspersed repeats annotation
Cited by: 8
Author(s): Viktor N. Shamanskiy, Valeria N. Timonina, Konstantin Popadin, Konstantin Gunbin
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-021-85963-3

A machine learning model for predicting the ballistic impact resistance of unidirectional fiber-reinforced composite plate
Cited by: 4
Author(s): Xudong Lei, Xiaotian Wu, Zilong Zhang, Kailu Xiao, Yunwen Wang, Chenguang Huang
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pone.0120455

A Multi-Label Learning Based Kernel Automatic Recommendation Method for Support Vector Machine
Cited by: 14
Author(s): Xueying Zhang, Qinbao Song
Software Mentions: 2
Published: over 9 years ago

10.1186/1471-2164-15-848

Homopolymer tract organization in the human malarial parasite Plasmodium falciparum and related Apicomplexan parasites
Cited by: 10
Author(s): Karen Russell, Chia-Ho Cheng, Jeffrey W. Bizzaro, Nadia Ponts, Richard D. Emes, Karine G. Le Roch, Kenneth A. Marx, Paul Horrocks
Software Mentions: 2
Published: about 10 years ago

10.15252/msb.20209813

Integrative proteomics reveals principles of dynamic phosphosignaling networks in human erythropoiesis
Cited by: 19
Author(s): Özge Karayel, Xu Peng, Isabell Bludau, Senthil Velan Bhoopalan, Yu Yao, Freitas Colaco Ana Rita, Alberto Santos, Brenda A. Schulman, Arno F. Alpi, Mitchell J. Weiss, Matthias Mann
Software Mentions: 2
Published: almost 4 years ago

10.3390/toxins12030152

Commercial Biocontrol Agents Reveal Contrasting Comportments Against Two Mycotoxigenic Fungi in Cereals: Fusarium Graminearum and Fusarium Verticillioides
Cited by: 14
Author(s): Lucile Pellan, Noël Durand, Véronique Martinez, Angélique Fontana, Sabine Schorr‐Galindo, Caroline Strub
Software Mentions: 2
Published: over 4 years ago

10.1128/mSystems.00554-19

Trends of Microdiversity Reveal Depth-Dependent Evolutionary Strategies of Viruses in the Mediterranean
Cited by: 22
Author(s): Felipe H. Coutinho, Riccardo Rosselli, Francisco Rodrı́guez-Valera
Software Mentions: 2
Published: almost 5 years ago

10.3390/jof7060446

Biocontrol Agents: Toolbox for the Screening of Weapons against Mycotoxigenic Fusarium
Cited by: 12
Author(s): Lucile Pellan, Cheikh Ahmeth Tidiane Dieye, Noël Durand, Angélique Fontana, Caroline Strub, Sabine Schorr‐Galindo
Software Mentions: 2
Published: over 3 years ago

10.7554/eLife.68479

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
Cited by: 19
Author(s): Elizabeth Jaworski, Rose M. Langsjoen, Brooke Mitchell, Barbara M. Judy, Patrick C. Newman, Jessica A. Plante, Kenneth S. Plante, Aaron L. Miller, Yiyang Zhou, Daniele M. Swetnam, Stephanea Sotcheff, Victoria Morris, Nehad Saada, Rafael Rahal Guaragna Machado, Allan McConnell, Steven G. Widen, Jill C. Thompson, Jianli Dong, Ping Ren, Rick B. Pyles, Thomas G. Ksiazek, Vineet D. Menachery, Scott C. Weaver, Andrew Routh
Software Mentions: 2
Published: about 3 years ago

10.3389/fpls.2018.01565

Detection of T. urartu Introgressions in Wheat and Development of a Panel of Interspecific Introgression Lines
Cited by: 22
Author(s): Surbhi Grewal, Stella Hubbart‐Edwards, Caiyun Yang, Duncan Scholefield, Stephen Ashling, Amanda Burridge, Paul Wilkinson, Ian P. King, Julie King
Software Mentions: 2
Published: about 6 years ago

10.1111/jcmm.15001

Circulating microRNA profiles based on direct S‐Poly(T)Plus assay for detection of coronary heart disease
Cited by: 13
Author(s): Ming‐Yang Su, Yanqin Niu, Quanjin Dang, Junle Qu, Daling Zhu, Zhongren Tang, Deming Gou
Software Mentions: 2
Published: over 4 years ago

10.1186/s12864-019-5712-3

Development of a highly efficient Axiom™ 70 K SNP array for Pyrus and evaluation for high-density mapping and germplasm characterization
Cited by: 36
Author(s): Sara Montanari, Luca Bianco, Brian Allen, Pedro J. Martínez-García, Nahla V. Bassil, Joseph D. Postman, Mareike Knäbel, Biff Kitson, Cecilia Deng, David Chagné, Marc W. Crepeau, Charles H. Langley, Kate Evans, Amit Dhingra, Michela Troggio, David B. Neale
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pcbi.1002709

Disease-Associated Mutations Disrupt Functionally Important Regions of Intrinsic Protein Disorder
Cited by: 121
Author(s): Vladimir Vacic, Phineus R. L. Markwick, Christopher J. Oldfield, Xiaoyue Zhao, Chad Haynes, Vladimir N. Uversky, Lilia M. Iakoucheva
Software Mentions: 2
Published: about 12 years ago

10.3390/s18113945

THz Spectroscopic Investigation of Wheat-Quality by Using Multi-Source Data Fusion
Cited by: 13
Author(s): Hongyi Ge, Yuying Jiang, Yuan Zhang
Software Mentions: 1
Published: about 6 years ago

10.3390/toxins13090597

Biocontrol Agents Reduce Progression and Mycotoxin Production of Fusarium graminearum in Spikelets and Straws of Wheat
Cited by: 3
Author(s): Lucile Pellan, Cheikh Ahmeth Tidiane Dieye, Noël Durand, Angélique Fontana, Sabine Schorr‐Galindo, Caroline Strub
Software Mentions: 1
Published: about 3 years ago

10.1186/s12967-019-2061-6

Direct S-Poly(T) Plus assay in quantification of microRNAs without RNA extraction and its implications in colorectal cancer biomarker studies
Cited by: 4
Author(s): Yanqin Niu, Sijian Xia, Ming‐Yang Su, Quanjin Dang, Kang Kang, Li Li, Deming Gou
Software Mentions: 1
Published: about 5 years ago

10.1186/s40478-018-0597-y

Preserving prion strain identity upon replication of prions in vitro using recombinant prion protein
Cited by: 6
Author(s): Natallia Makarava, Regina Savtchenko, Peter Lasch, Michael Beekes, Ilia V. Baskakov
Software Mentions: 1
Published: about 6 years ago

10.1155/2018/7608108

Early Prediction of Hypoxic-Ischemic Brain Injury by a New Panel of Biomarkers in a Population of Term Newborns
Cited by: 26
Author(s): Simona Negro, Manon J. N. L. Benders, Maria Luisa Tataranno, Caterina Coviello, Linda S. de Vries, Frank van Bel, Floris Groenendaal, Mariangela Longini, Fabrizio Proietti, Elisa Belvisi, Giuseppe Buonocore, Serafina Perrone
Software Mentions: 1
Published: over 6 years ago

10.1186/1471-2105-10-86

In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles
Cited by: 3
Author(s): Frank Lin, Enrico Coiera, Ruiting Lan, Vitali Sintchenko
Software Mentions: 1
Published: over 15 years ago

10.1186/1471-2121-12-4

Persistent directional cell migration requires ion transport proteins as direction sensors and membrane potential differences in order to maintain directedness
Cited by: 54
Author(s): Nurdan Özkucur, Srikanth Perike, Priyanka Sharma, Richard Funk
Software Mentions: 1
Published: almost 14 years ago

10.1186/1471-2164-5-95

Homopolymer tract length dependent enrichments in functional regions of 27 eukaryotes and their novel dependence on the organism DNA (G+C)% composition
Cited by: 24
Author(s): Yue Zhou, Jeffrey W. Bizzaro, Kenneth A. Marx
Software Mentions: 1
Published: almost 20 years ago

10.1186/1741-7015-10-125

Correlation analyses of clinical and molecular findings identify candidate biological pathways in systemic juvenile idiopathic arthritis
Cited by: 11
Author(s): Xuefeng B. Ling, Claudia Macaubas, Heather C. Alexander, Qiaojun Wen, Edward Chen, Syd S. Peng, Yue Sun, Chetan Deshpande, Kuang Hung Pan, Richard Lin, Chih Jian Lih, Sheng Yung Chang, Tzielan Lee, Christy Sandborg, Ann B. Begovich, Stanley N. Cohen, Elizabeth Mellins
Software Mentions: 1
Published: about 12 years ago

10.3390/biomimetics3030017

Moving toward Soft Robotics: A Decade Review of the Design of Hand Exoskeletons
Cited by: 101
Author(s): Talha Shahid, Darwin Gouwanda, Surya G. Nurzaman, Alpha Agape Gopalai
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pcbi.1008297

Poly(A)-DG: A deep-learning-based domain generalization method to identify cross-species Poly(A) signal without prior knowledge from target species
Cited by: 9
Author(s): Yumin Zheng, Haohan Wang, Yang Zhang, Xin Gao, Eric P. Xing, Min Xu
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0079231

Epigenetic Regulation and Functional Characterization of MicroRNA-142 in Mesenchymal Cells
Cited by: 20
Author(s): Magne Skårn, Tale Barøy, Eva W. Stratford, Ola Myklebost
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0119154

Characterization of Two Novel Gammapapillomaviruses, HPV179 and HPV184, Isolated from Common Warts of a Renal-Transplant Recipient
Cited by: 18
Author(s): Lea Hošnjak, Boštjan J. Kocjan, Branko Pirš, Katja Seme, Mario Poljak
Software Mentions: 1
Published: over 9 years ago

10.1371/journal.pone.0234696

Poly(A)-seq: A method for direct sequencing and analysis of the transcriptomic poly(A)-tails
Cited by: 21
Author(s): Fengyun Yu, Yu Zhang, Chao Cheng, Wenqing Wang, Zhiqing Zhou, Wenliang Rang, Han Yu, Yaxun Wei, Qinghua Wu, Yi Zhang
Software Mentions: 1
Published: over 4 years ago

10.3389/fneur.2021.637947

A Rodent Model of Mild Neonatal Hypoxic Ischemic Encephalopathy
Cited by: 3
Author(s): Julien Gotchac, Laura Cardoit, Muriel Thoby‐Brisson, Olivier Brissaud
Software Mentions: 1
Published: over 3 years ago

10.1098/rspa.2018.0566

Modelling and testing of a wave energy converter based on dielectric elastomer generators
Cited by: 35
Author(s): Giacomo Moretti, Gastone Pietro Rosati Papini, Luca Daniele, David Forehand, David Ingram, Rocco Vertechy, Marco Fontana
Software Mentions: 1
Published: almost 6 years ago

10.1186/1477-7827-9-128

Members of the murine Pate family are predominantly expressed in the epididymis in a segment-specific fashion and regulated by androgens and other testicular factors
Cited by: 13
Author(s): Heikki Turunen, Petra Sipilä, Dwi Ari Pujianto, Anastasios Damdimopoulos, Ida Björkgren, Ilpo Huhtaniemi, Matti Poutanen
Software Mentions: 1
Published: about 13 years ago

10.1038/srep28101

Profiling of differentially expressed microRNAs in arrhythmogenic right ventricular cardiomyopathy
Cited by: 41
Author(s): Hongliang Zhang, Shenghua Liu, Tianwei Dong, Jun Yang, Yuanyuan Xie, Yike Wu, Kang Kang, Shengshou Hu, Deming Gou, Yingjie Wei
Software Mentions: 1
Published: over 8 years ago

10.1155/2015/861629

Personal Authentication Using Multifeatures Multispectral Palm Print Traits
Cited by: 3
Author(s): Gayathri Rajagopal, Senthil Kumar Manoharan
Software Mentions: 1
Published: almost 10 years ago

10.3390/s140712784

Classification of EEG Signals Using a Multiple Kernel Learning Support Vector Machine
Cited by: 104
Author(s): Xiaoou Li, Xun Chen, Yuan Yan, Wenshi Wei, Z. Jane Wang
Software Mentions: 1
Published: over 10 years ago

10.3390/s18082585

Modified A-Star Algorithm for Efficient Coverage Path Planning in Tetris Inspired Self-Reconfigurable Robot with Integrated Laser Sensor
Cited by: 114
Author(s): Anh Vu Le, Prabakaran Veerajagadheswar, Vinu Sivanantham, Rajesh Elara Mohan
Software Mentions: 1
Published: over 6 years ago

Projects: pypi: Poly

Papers Mentioning Poly 38