cran: adespatial | Projects | Ecosyste.ms: Papers

10.1038/s41597-019-0344-7

A global database for metacommunity ecology, integrating species, traits, environment and space
Cited by: 21
Author(s): Aliénor Jeliazkov, Darko Mijatovic, Stéphane Chantepie, Nigel R. Andrew, Raphaël Arlettaz, Luc Barbaro, Nadia Barsoum, Alena Sucháčková Bartoňová, Elena Belskaya, Núria Bonada, Anik Brind’Amour, Rodrigo Assis de Carvalho, Helena Castro, Damian Chmura, Philippe Choler, Karen M. Chong‐Seng, Daniel F. R. Cleary, A. Cormont, William K. Cornwell, Ramiro de Campos, Nicole J. de Voogd, Sylvain Dolédec, Joshua Adam Drew, Frank Dziock, Anthony S. Eallonardo, Melanie J. Edgar, Fábio Z. Farneda, Domingo Flores Hernández, Cédric Frenette‐Dussault, Guillaume Fried, Belinda Gallardo, Heloise Gibb, Thiago Gonçalves‐Souza, Janet Higuti, Jean‐Yves Humbert, Boris R. Krasnov, Eric Le Saux, Zoë Lindo, Adrià López‐Baucells, E. Cronin Lowe, Bryndís Marteinsdóttir, Koenraad Martens, Peter J. Meffert, Andrés Mellado‐Díaz, Myles H. M. Menz, Christoph F. J. Meyer, Julia Ramos-Miranda, David Mouillot, Alessandro Ossola, Robin J. Pakeman, Sandrine Pavoine, Burak K. Pekin, Joan Pino, Arnaud Pocheville, Francesco Pomati, Peter Poschlod, Honor C. Prentice, Oliver Purschke, Valérie Raevel, Triin Reitalu, Willem Renema, Ignacio Ribera, Natalie Robinson, Bjorn J. M. Robroek, Ricardo Rocha, Sen-Her Shieh, Rebecca Spake, Monika Staniaszek‐Kik, Michał Stanko, Francisco Leonardo Tejerina‐Garro, Cajo J. F. ter Braak, Mark C. Urban, Roel van Klink, Sébastien Villéger, R.J.M. Wegman, Martin J. Westgate, Jonas Wolff, Jan Żarnowiec, М. П. Золотарев, Jonathan M. Chase
Software Mentions: 16
Published: almost 5 years ago

10.1093/conphys/coaa047

Changes in physiology and microbial diversity in larval ornate chorus frogs are associated with habitat quality
Cited by: 9
Author(s): Cory B. Goff, Susan C. Walls, David Rodríguez, Caitlin R. Gabor
Software Mentions: 12
Published: almost 5 years ago

10.1002/ece3.7625

Genetic differentiation and signatures of local adaptation revealed by RADseq for a highly dispersive mud crab Scylla olivacea (Herbst, 1796) in the Sulu Sea
Cited by: 4
Author(s): Michael John Mendiola, Rachel Ravago-Gotanco
Software Mentions: 12
Published: over 3 years ago

10.3389/fmicb.2020.01391

Stochastic Dispersal Rather Than Deterministic Selection Explains the Spatio-Temporal Distribution of Soil Bacteria in a Temperate Grassland
Cited by: 31
Author(s): Tim Richter-Heitmann, Benjamin Hofner, Franz‐Sebastian Krah, Johannes Sikorski, Pia K. Wüst, Boyke Bunk, Sixing Huang, Kathleen M. Regan, Doreen Berner, Runa S. Boeddinghaus, Sven Marhan, Daniel Prati, Ellen Kandeler, Jörg Overmann, Michael W. Friedrich
Software Mentions: 11
Published: over 4 years ago

10.1038/s41598-019-47595-6

Coordinated community structure among trees, fungi and invertebrate groups in Amazonian rainforests
Cited by: 14
Author(s): Jason Vleminckx, Heidy Schimann, Thibaud Decaëns, Mélanie Fichaux, Vincent Vedel, Gaëlle Jaouen, Mélanie Roy, Emmanuel Lapied, Julien Engel, Aurélie Dourdain, Pascal Pétronelli, Jérôme Orivel, Christopher Baraloto
Software Mentions: 11
Published: over 5 years ago

10.1111/eva.13143

Population genomics and history of speciation reveal fishery management gaps in two related redfish species ( Sebastes mentella and Sebastes fasciatus )
Cited by: 20
Author(s): Laura Benestan, Quentin Rougemont, Caroline Senay, Éric Normandeau, Éric Parent, Rick M. Rideout, Louis Bernatchez, Yvan Lambert, Céline Audet, Gérard Parent
Software Mentions: 10
Published: almost 4 years ago

10.1038/s41598-021-94198-1

Unraveling the ecological processes modulating the population structure of Escherichia coli in a highly polluted urban stream network
Cited by: 7
Author(s): Martín Saraceno, Sebastián Gómez Lugo, Nicolás Ortiz, Bárbara Marion Gomez, Carmen A. Sabio y García, Nicolás Frankel, Martín Graziano
Software Mentions: 10
Published: over 3 years ago

10.7717/peerj.3795

Multivariate ordination identifies vegetation types associated with spider conservation in brassica crops
Cited by: 4
Author(s): Hafiz Sohaib Ahmed Saqib, Minsheng You, Geoff M. Gurr
Software Mentions: 9
Published: about 7 years ago

10.3390/microorganisms8010038

Tomato RNA-seq Data Mining Reveals the Taxonomic and Functional Diversity of Root-Associated Microbiota
Cited by: 13
Author(s): Matteo Chialva, Stefano Ghignone, Mara Novero, Wael N. Hozzein, Luisa Lanfranco, Paola Bonfante
Software Mentions: 9
Published: almost 5 years ago

10.1002/ece3.6913

Changes in beta diversity and species functional traits differ between saplings and mature trees in an old‐growth forest
Cited by: 1
Author(s): David Anthony Kirk, Marie‐Hélène Brice, Michael S. W. Bradstreet, Ken A. Elliott
Software Mentions: 8
Published: almost 4 years ago

10.1371/journal.pone.0234498

Landscape composition and local floral resources influence foraging behavior but not the size of Bombus impatiens Cresson (Hymenoptera: Apidae) workers
Cited by: 9
Author(s): Amélie Gervais, Ève Courtois, Valérie Fournier, Marc Bélisle
Software Mentions: 8
Published: over 4 years ago

10.1111/eva.12626

Capturing genetic variation in crop wild relatives: An evolutionary approach
Cited by: 20
Author(s): Paul A. Egan, Anne Muola, Johan A. Stenberg
Software Mentions: 8
Published: over 6 years ago

10.1111/eva.12932

Fine‐scale seascape genomics of an exploited marine species, the common cockle Cerastoderma edule, using a multimodelling approach
Cited by: 25
Author(s): Ilaria Coscia, Sophie B. Wilmes, Joseph E. Ironside, Alice Goward‐Brown, Enda O’Dea, Shelagh K. Malham, Allan D. McDevitt, Peter Robins
Software Mentions: 8
Published: over 4 years ago

10.1128/mSystems.01150-20

Distinct Community Assembly Processes of Abundant and Rare Soil Bacteria in Coastal Wetlands along an Inundation Gradient
Cited by: 36
Author(s): Gui‐Feng Gao, Dan Peng, Binu M. Tripathi, Yihui Zhang, Haiyan Chu
Software Mentions: 8
Published: almost 4 years ago

10.1371/journal.pone.0239086

Geospatial analysis of the patterns of chemical exposures among biota in the Canadian Oil Sands Region
Cited by: 3
Author(s): Kristin M. Eccles, Bruce D. Pauli, Hing Man Chan
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0250401

From the Andes to the desert: 16S rRNA metabarcoding characterization of aquatic bacterial communities in the Rimac river, the main source of water for Lima, Peru
Cited by: 5
Author(s): Pedro E. Romero, Erika Calla-Quispe, Camila Castillo-Vilcahuaman, Mateo Yokoo, Hammerly Lino Fuentes-Rivera, Jorge L. Ramírez, André Ampuero, Alfredo J. Ibáñez, Paolo Wong
Software Mentions: 6
Published: over 3 years ago

10.1186/s40168-021-01070-5

Defining the resilience of the human salivary microbiota by a 520-day longitudinal study in a confined environment: the Mars500 mission
Cited by: 4
Author(s): Giovanni Bacci, Alessio Mengoni, Giovanni Emiliani, Carolina Chiellini, Edoardo Giovanni Cipriani, Giovanna Bianconi, Francesco Canganella, Renato Fani
Software Mentions: 6
Published: over 3 years ago

10.1002/ece3.6103

Metacommunity Structure of Stream Insects across Three Hierarchical Spatial scales
Cited by: 12
Author(s): Siwen He, Janne Soininen, Guiping Deng, Beixin Wang
Software Mentions: 5
Published: over 4 years ago

10.7717/peerj.9777

Generalized Linear Models outperform commonly used canonical analysis in estimating spatial structure of presence/absence data
Cited by: 4
Author(s): Lélis Antonio Carlos-Júnior, Joel Christopher Creed, Rob H. Marrs, Rob J. Lewis, Timothy P. Moulton, Rafael Feijó‐Lima, Matthew Spencer
Software Mentions: 5
Published: about 4 years ago

10.1093/plankt/fbab033

Key drivers structuring rotifer communities in ponds: insights into an agricultural landscape
Cited by: 10
Author(s): Gabriela Onandía, Sebastian Maassen, Camille Musseau, Stella A. Berger, Carla Olmo, Jonathan M. Jeschke, Gunnar Lischeid
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0239874

Seasonal patterns of ecological uniqueness of anuran metacommunities along different ecoregions in Western Brazil
Cited by: 7
Author(s): Karoline Ceron, Diego José Santana, Francisco Valente‐Neto
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pone.0256637

Beta diversity differs among hydrothermal vent systems: Implications for conservation
Cited by: 7
Author(s): Thomas Giguère, Verena Tunnicliffe
Software Mentions: 4
Published: about 3 years ago

10.1371/journal.pone.0225859

Using baited remote underwater videos (BRUVs) to characterize chondrichthyan communities in a global biodiversity hotspot
Cited by: 20
Author(s): Geoffrey J. Osgood, Meaghen E. McCord, Julia K. Baum
Software Mentions: 4
Published: almost 5 years ago

10.1038/s42003-020-01562-4

Shifts in honeybee foraging reveal historical changes in floral resources
Cited by: 27
Author(s): Laura Jones, Georgina Brennan, Abigail Lowe, Simon Creer, Col R. Ford, Natasha de Vere
Software Mentions: 4
Published: almost 4 years ago

10.1111/eva.12825

Signatures of adaptive divergence among populations of an avian species of conservation concern
Cited by: 10
Author(s): Shawna J. Zimmerman, Cameron L. Aldridge, Kevin P. Oh, Robert S. Cornman, Sara J. Oyler‐McCance
Software Mentions: 4
Published: over 5 years ago

10.1093/femsec/fiab049

Factors influencing the biodiversity of three microbial groups within and among islands of the Baltic Sea
Cited by: 5
Author(s): Anette Teittinen, Leena Virta, Mingjia Li, Jianjun Wang
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2016.01933

Local and Regional Diversity Reveals Dispersal Limitation and Drift as Drivers for Groundwater Bacterial Communities from a Fractured Granite Formation
Cited by: 16
Author(s): Danielle Beaton, Bradley S. Stevenson, K.J. King-Sharp, Blake W. Stamps, Heather S. Nunn, Marilyne Stuart
Software Mentions: 4
Published: almost 8 years ago

10.3389/fmicb.2018.02590

Two Populations of Mites (Tyrophagus putrescentiae) Differ in Response to Feeding on Feces-Containing Diets
Cited by: 18
Author(s): Jan Hubert, Marta Nešvorná, B. Sopko, Jaroslav Smrž, Pavel B. Klimov, Tomáš Erban
Software Mentions: 4
Published: about 6 years ago

10.1098/rsos.191164

Persistent and substantial impacts of the Deepwater Horizon oil spill on deep-sea megafauna
Cited by: 23
Author(s): Craig R. McClain, Clifton C. Nunnally, Mark C. Benfield
Software Mentions: 4
Published: over 5 years ago

10.1098/rsos.191952

Evaluation of host effects on ectomycorrhizal fungal community compositions in a forested landscape in northern Japan
Cited by: 7
Author(s): Shiro Matsuoka, Yasumasa Sugiyama, Ryunosuke Tateno, Shihomi Imamura, Eri Kawaguchi, Takashi Osono
Software Mentions: 4
Published: almost 5 years ago

10.1038/s41598-021-95146-9

The phyllosphere microbiome of host trees contributes more than leaf phytochemicals to variation in the Agrilus planipennis Fairmaire gut microbiome structure
Cited by: 7
Author(s): Judith Mogouong, Philippe Constant, Pierre Legendre, Claude Guertin
Software Mentions: 4
Published: over 3 years ago

10.3389/fmicb.2017.01731

Spatial Autocorrelation, Source Water and the Distribution of Total and Viable Microbial Abundances within a Crystalline Formation to a Depth of 800 m
Cited by: 0
Author(s): Danielle Beaton, Marilyne Stuart, S. Stroes-Gascoyne, K.J. King-Sharp, Ioana Gurban, Amy Festarini, Hui Q. Chen
Software Mentions: 3
Published: about 7 years ago

10.1186/s40709-019-0106-x

Patterns and drivers of species richness and turnover of neo-endemic and palaeo-endemic vascular plants in a Mediterranean hotspot: the case of Crete, Greece
Cited by: 21
Author(s): Maria Lazarina, Athanasios S. Kallimanis, Panayotis Dimopoulos, Maria Psaralexi, Danai‐Eleni Michailidou, Stefanos P. Sgardelis
Software Mentions: 3
Published: about 5 years ago

10.1098/rsos.190958

Low connectivity between shallow, mesophotic and rariphotic zone benthos
Cited by: 18
Author(s): Paris V. Stefanoudis, Molly Rivers, Struan R. Smith, Craig W. Schneider, Daniel Wagner, Helen Ford, Alex D. Rogers, Lucy C. Woodall
Software Mentions: 3
Published: about 5 years ago

10.1038/s41598-021-82059-w

Local environmental variables are key drivers of ant taxonomic and functional beta-diversity in a Mediterranean dryland
Cited by: 11
Author(s): Clara Frasconi Wendt, Ana Ceia-Hasse, Alice Nunes, Robin M. Verble, Giacomo Santini, Mário Boieiro, Cristina Branquinho
Software Mentions: 2
Published: almost 4 years ago

10.1098/rsos.171700

The multiple roles of β-diversity help untangle community assembly processes affecting recovery of temperate rocky shores
Cited by: 7
Author(s): Mariachiara Chiantore, Simon F. Thrush, Valentina Asnaghi, Judi E. Hewitt
Software Mentions: 2
Published: over 6 years ago

Ecosyste.ms: Papers

Projects: cran: adespatial

Papers Mentioning adespatial 36