Ecosyste.ms: Papers

10.1186/1476-072X-14-7

Using geovisual analytics in Google Earth to understand disease distribution: a case study of campylobacteriosis in the Czech Republic (2008–2012)
Cited by: 19
Author(s): L. Marek, Pavel Tuček, Vít Pásztó
Software Mentions: 8
Published: almost 10 years ago

10.1371/journal.pone.0185207

Escape Excel: A tool for preventing gene symbol and accession conversion errors
Cited by: 8
Author(s): Eric A. Welsh, Paul A. Stewart, Brent M. Kuenzi, James A. Eschrich
Software Mentions: 4
Published: about 7 years ago

10.1084/jem.20201729

Yolk sac, but not hematopoietic stem cell–derived progenitors, sustain erythropoiesis throughout murine embryonic life
Cited by: 40
Author(s): Francisca Soares-da-Silva, Laina Freyer, Ramy Elsaid, Odile Burlen-Defranoux, Lorea Iturri, Odile Sismeiro, Perpétua Pinto-do-Ó, Elisa Gomez Perdiguero, Ana Cumano
Software Mentions: 4
Published: almost 4 years ago

10.1038/sdata.2017.206

Australia’s continental-scale acoustic tracking database and its automated quality control process
Cited by: 46
Author(s): Xavier Hoenner, Charlie Huveneers, Andre Steckenreuter, Colin A. Simpfendorfer, Katherine Tattersall, Fabrice R. A. Jaine, Natalia Atkins, Russell C. Babcock, Stephanie Brodie, Jonathan S. Burgess, Hamish A. Campbell, Michelle R. Heupel, B. Pasquer, Roger Proctor, Matthew D. Taylor, Vinay Udyawer, Robert Harcourt
Software Mentions: 3
Published: almost 7 years ago

10.3390/ijms22041831

Receptor Tyrosine Kinase Signaling and Targeting in Glioblastoma Multiforme
Cited by: 33
Author(s): Manali Tilak, Jennifer Holborn, Laura A. New, Jasmin Lalonde, Nina Jones
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13568-018-0647-7

Identification of genome-wide binding sites of heat shock factor 1, Hsf1, under basal conditions in the human pathogenic yeast, Candida albicans
Cited by: 5
Author(s): Remya Nair, Nitesh Khandelwal, Mohd Shariq, Archana Kumari Redhu, Naseem A. Gaur, Shamim Shaikh, Rajendra Prasad
Software Mentions: 2
Published: over 6 years ago

10.1007/s00253-015-6831-7

A multiplex oligonucleotide ligation-PCR as a complementary tool for subtyping of Salmonella Typhimurium
Cited by: 12
Author(s): Véronique Wuyts, Wesley Mattheus, Nancy Roosens, Kathleen Marchal, Sophie Bertrand, Sigrid C. J. De Keersmaecker
Software Mentions: 2
Published: over 9 years ago

10.1186/s12911-018-0622-x

Design and implementation of an m-health data model for improving health information access for reproductive and child health services in low resource settings using a participatory action research approach
Cited by: 20
Author(s): Joseph Thobias, Achilles Kiwanuka
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pone.0121042

Host Glycan Sugar-Specific Pathways in Streptococcus pneumonia: Galactose as a Key Sugar in Colonisation and Infection
Cited by: 67
Author(s): Laura Paixão, J.Santos Oliveira, André Veríssimo, Susana Vinga, Eva C. Lourenço, M. Rita Ventura, Morten Kjos, Jan‐Willem Veening, Vitor E. Fernandes, Peter W. Andrew, Hasan Yeşilkaya, Ana Rute Neves
Software Mentions: 2
Published: over 9 years ago

10.1038/s42003-021-01663-8

The level of oncogenic Ras determines the malignant transformation of Lkb1 mutant tissue in vivo
Cited by: 5
Author(s): Briana Rackley, Chang Soo Seong, Evan Kiely, Rebecca E. Parker, Manali Rupji, Bhakti Dwivedi, John M. Heddleston, W. Giang, Neil Anthony, Teng‐Leong Chew, Melissa Gilbert‐Ross
Software Mentions: 2
Published: almost 4 years ago

10.1038/srep42800

The ubiquitin ligase Cullin5SOCS2 regulates NDR1/STK38 stability and NF-κB transactivation
Cited by: 31
Author(s): Indranil Paul, Tanveer S. Batth, Diego Iglesias-Gato, Amna Al-Araimi, Ibrahim Al-Haddabi, Amira Alkharusi, Gunnar Norstedt, Jesper V. Olsen, Fahad Zadjali, Amílcar Flores-Morales
Software Mentions: 2
Published: almost 8 years ago

10.1038/srep46084

The global regulator Ncb2 escapes from the core promoter and impacts transcription in response to drug stress in Candida albicans
Cited by: 7
Author(s): Mohd Shariq, Sanjiveeni Dhamgaye, Remya Nair, Neha Goyal, Vaibhav Jain, Arnab Mukhopadhyay, Alok K. Mondal, Gauranga Mukhopadhyay, Rajendra Prasad
Software Mentions: 2
Published: over 7 years ago

10.1038/s41598-020-79486-6

Weather radar detection of planetary boundary layer and smoke layer top of peatland fire in Central Kalimantan, Indonesia
Cited by: 6
Author(s): Mijani Rahman, Devis Styo Nugroho, Manabu D. Yamanaka, Masahiro Kawasaki, Osamu Kozan, Masafumi Ohashi, Hiroyuki Hashiguchi, Shuichi Mori
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0012147

Hepatic Gene Expression Profiling Reveals Key Pathways Involved in Leptin-Mediated Weight Loss in ob/ob Mice
Cited by: 23
Author(s): Ashok Sharma, Shoshana M. Bartell, Clifton A. Baile, Bin Chen, Robert H. Podolsky, Richard A. McIndoe, Jin Xiong She
Software Mentions: 1
Published: over 14 years ago

10.1186/s12879-017-2594-3

Pyrazinamide resistance-conferring mutations in pncA and the transmission of multidrug resistant TB in Georgia
Cited by: 20
Author(s): Sarah Sengstake, Indra Bergval, A. R. J. Schuitema, Jessica de Beer, Jody Phelan, Rina de Zwaan, Taane G. Clark, Dick van Soolingen, Richard Anthony
Software Mentions: 1
Published: over 7 years ago

10.1007/s00406-012-0306-y

Structural synaptic elements are differentially regulated in superior temporal cortex of schizophrenia patients
Cited by: 28
Author(s): Andrea Schmitt, Fernando Leonardi-Essmann, Pascal F. Durrenberger, Sven P. Wichert, Rainer Spanagel, Thomas Arzberger, Hans A. Kretzschmar, Mathias Zink, Mario Herrera‐Marschitz, Richard Reynolds, Moritz J. Rossner, Peter Falkai, Peter J. Gebicke‐Haerter
Software Mentions: 1
Published: over 12 years ago

10.3389/fncir.2016.00010

Dynamic Analysis of the Conditional Oscillator Underlying Slow Waves in Thalamocortical Neurons
Cited by: 6
Author(s): François David, Vincenzo Crunelli, Nathalie Leresche, Régis C. Lambert
Software Mentions: 1
Published: over 8 years ago

10.3389/fneur.2019.00725

CODE STROKE ALERT—Concept and Development of a Novel Open-Source Platform to Streamline Acute Stroke Management
Cited by: 10
Author(s): Huey Ming Seah, Moe Burney, Michael Phan, Daniel Shell, Joey Wu, Kevin Zhou, Owen Brooks, Bronwyn Coulton, Julian Maingard, Joey Tang, Gohar Yazdabadi, Bahman Tahayori, Christen Barras, Hong Kuan Kok, Ronil V. Chandra, Vincent Thijs, Duncan Mark Brooks, Hamed Asadi
Software Mentions: 1
Published: over 5 years ago

10.3390/genes10100760

A Useful SNP Panel to Distinguish Two Cockle Species, Cerastoderma edule and C. glaucum, Co-Occurring in Some European Beds, and Their Putative Hybrids
Cited by: 8
Author(s): Francesco Maroso, Celia Pérez de Gracia, David Iglesias, Asunción Cao, Seila Díaz, António Villalba, Manuel Vera, Paulino Martı́nez
Software Mentions: 1
Published: about 5 years ago

10.1186/s12961-021-00757-3

Community health workers at the dawn of a new era: 6. Recruitment, training, and continuing education
Cited by: 29
Author(s): Meike Schleiff, Iain Aitken, Mohammad Ariful Alam, Zufan Abera Damtew, Henry B. Perry
Software Mentions: 1
Published: about 3 years ago

10.1002/hsr2.214

Potentially inappropriate medications prescribing to elderly patients with advanced chronic kidney by using 2019 American Geriatrics Society Beers Criteria
Cited by: 19
Author(s): Bahia Chahine
Software Mentions: 1
Published: almost 4 years ago

10.1109/access.2021.3093524

Experiment Selection in Meta-Analytic Piecemeal Causal Discovery
Cited by: 0
Author(s): Nicholas J. Matiasz, Joanne V. Wood, Wei Wang, Alcino J. Silva, William Hsu
Software Mentions: 1
Published: almost 4 years ago

10.3390/jcm10071533

Emerging Protein Biomarkers for the Diagnosis or Prediction of Gestational Diabetes—A Scoping Review
Cited by: 14
Author(s): Delia Bogdanet, Catriona Reddin, Dearbhla Murphy, Helen C. Doheny, José A. Halperin, Fidelma Dunne, Paula O’Shea
Software Mentions: 1
Published: over 3 years ago

10.1128/JCM.00632-20

Application of Targeted Next-Generation Sequencing Assay on a Portable Sequencing Platform for Culture-Free Detection of Drug-Resistant Tuberculosis from Clinical Samples
Cited by: 47
Author(s): Andrea Maurizio Cabibbe, Andrea Spitaleri, Simone Battaglia, Rebecca E. Colman, Anita Suresh, Swapna Uplekar, Timothy C. Rodwell, Daniela María Cirillo
Software Mentions: 1
Published: about 4 years ago

10.1080/14756366.2018.1457657

Molecular modelling insights into a physiologically favourable approach to eicosanoid biosynthesis inhibition through novel thieno[2,3-<i>b</i>]pyridine derivatives
Cited by: 18
Author(s): Mosaad S. Mohamed, Yara E. Mansour, Hatem K. Amin, Moustafa E. El‐Araby
Software Mentions: 1
Published: almost 7 years ago

10.1002/jrsm.1290

Rating the quality of a body of evidence on the effectiveness of health and social interventions: A systematic review and mapping of evidence domains
Cited by: 20
Author(s): Ani Movsisyan, Jane A Dennis, Eva Rehfuess, Sean Grant, Paul Montgomery
Software Mentions: 1
Published: over 6 years ago

10.1186/s12911-020-1065-8

Content and system development of a digital patient-provider communication tool to support shared decision making in chronic health care: InvolveMe
Cited by: 12
Author(s): Berit Seljelid, Cecilie Varsi, Lise Solberg Nes, Aud‐E. Stenehjem, Jens Bollerslev, Elin Børøsund
Software Mentions: 1
Published: over 4 years ago

10.1038/srep18997

An integrated chinmedomics strategy for discovery of effective constituents from traditional herbal medicine
Cited by: 85
Author(s): Xijun Wang, Aihua Zhang, Xiaohang Zhou, Qi Liu, Nan Yang, Yu Guan, Ling Kong, Ying Han, Hui Sun, Yan Ge
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2156-8-35

Sequence analysis of coding and 3' and 5' flanking regions of the epithelial sodium channel α, β, and γ genes in Dahl S versus R rats
Cited by: 13
Author(s): Marlene Shehata, Frans H. H. Leenen, Frédérique Tesson
Software Mentions: 1
Published: over 17 years ago

10.3390/ijerph120100841

Agreement Between Exhaled Breath Carbon Monoxide Threshold Levels and Self-Reported Cigarette Smoking in a Sample of Male Adolescents in Jordan
Cited by: 22
Author(s): Nihaya Al-Sheyab, Khalid A. Kheirallah, Linda J Thomson Mangnall, Robyn Gallagher
Software Mentions: 1
Published: almost 10 years ago

10.1038/s41598-020-73044-w

Candida albicans cell wall as a target of action for the protein–carbohydrate fraction from coelomic fluid of Dendrobaena veneta
Cited by: 10
Author(s): Marta J. Fiołka, Sylwia Mieszawska, Paulina Czaplewska, Aneta Szymańska, Katarzyna Stępnik, Weronika Sofińska-Chmiel, Tomasz Buchwald, Kinga Lewtak
Software Mentions: 1
Published: about 4 years ago

10.1186/s12859-018-2035-3

Ensemble of rankers for efficient gene signature extraction in smoke exposure classification
Cited by: 5
Author(s): Maurizio Giordano, Kumar Parijat Tripathi, Mario Rosario Guarracino
Software Mentions: 1
Published: over 6 years ago

10.1371/journal.pone.0071403

Metabolomics and Proteomics Annotate Therapeutic Properties of Geniposide: Targeting and Regulating Multiple Perturbed Pathways
Cited by: 36
Author(s): Xijun Wang, Aihua Zhang, Yan Ge, Wenjun Sun, Ying Han, Hui Sun
Software Mentions: 1
Published: over 11 years ago

10.1186/s40168-016-0196-8

The impact of sequence database choice on metaproteomic results in gut microbiota studies
Cited by: 89
Author(s): Alessandro Tanca, Antonio Palomba, Cristina Fraumene, Daniela Pagnozzi, Valeria Manghina, Massimo Deligios, Thilo Muth, Erdmann Rapp, Lennart Martens, Maria Filippa Addis, Sergio Uzzau
Software Mentions: 1
Published: about 8 years ago

10.1155/2020/3506207

Immunohistochemical Studies of Age-Related Changes in Cell Proliferation and Angiogenesis during the Healing of Acetic Acid-Induced Gastric Ulcers in Rats
Cited by: 6
Author(s): Ayodeji Folorunsho Ajayi, Samuel Babafemi Olaleye
Software Mentions: 1
Published: over 4 years ago

10.1371/journal.pone.0205936

Measuring the importance of vertices in the weighted human disease network
Cited by: 8
Author(s): Seyed Mehrzad Almasi, Ting Hu
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.pone.0096855

De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum
Cited by: 52
Author(s): Samuel E. Fox, Matthew Geniza, Mamatha Hanumappa, Sushma Naithani, Christopher J. Sullivan, Justin Preece, Vijay K. Tiwari, Justin Elser, Jeffrey M. Leonard, Abigail Sage, Cathy Gresham, Arnaud Kerhornou, Dan Bolser, Fiona M. McCarthy, Paul J. Kersey, Gerard R. Lazo, Pankaj Jaiswal
Software Mentions: 1
Published: over 10 years ago