cran: ASMap | Projects | Ecosyste.ms: Papers

10.1534/genetics.118.301595

R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations
Cited by: 295
Author(s): Karl W. Broman, Daniel M. Gatti, Petr Šimeček, Nicholas A. Furlotte, Pjotr Prins, Śaunak Sen, Brian S. Yandell, Gary A. Churchill
Software Mentions: 8
Published: almost 6 years ago

10.1111/1755-0998.13280

The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic
Cited by: 13
Author(s): Michael Nowak, Siri Birkeland, Terezie Mandáková, Rimjhim Roy Choudhury, Xi Guo, Lovisa Gustafsson, Abel Gizaw, Audun Schrøder-Nielsen, Marco Fracassetti, Anne K. Brysting, Loren H. Rieseberg, Tanja Slotte, Christian Parisod, Martin A. Lysak, Christian Brochmann
Software Mentions: 8
Published: about 4 years ago

10.1186/s12870-020-02756-y

Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus
Cited by: 8
Author(s): Armin Scheben, Anita A. Severn‐Ellis, Dhwani A. Patel, Aneeta Pradhan, S.J. Rae, Jacqueline Batley, David Edwards
Software Mentions: 6
Published: about 4 years ago

10.3389/fpls.2020.00939

Preferential Disomic Segregation and C. micrantha/C. medica Interspecific Recombination in Tetraploid ‘Giant Key’ Lime; Outlook for Triploid Lime Breeding
Cited by: 9
Author(s): Dalel Ahmed, Franck Curk, Jean Charles Evrard, Yann Froelicher, Patrick Ollitrault
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0227826

Identification of a major QTL and associated molecular marker for high arabinoxylan fibre in white wheat flour
Cited by: 16
Author(s): Alison Lovegrove, Luzie U. Wingen, A.M. Plummer, A. Wood, Diana Passmore, Ondřej Kosík, J. Freeman, Rachel Mitchell, Kirsty L. Hassall, Mehmet Ülker, Karolina Tremmel-Bede, Marianna Rakszegi, Z. Bedő, Marie-Reine Perretant, Gilles Charmet, Caroline Pont, Jérôme Salse, Michelle Leverington Waite, Simon Orford, Amanda Burridge, Till K. Pellny, Peter R. Shewry, Simon Griffiths
Software Mentions: 5
Published: almost 5 years ago

10.1534/g3.120.401452

Adoption and Optimization of Genomic Selection To Sustain Breeding for Apricot Fruit Quality
Cited by: 10
Author(s): Mariem Nsibi, Barbara Gouble, Sylvie Bureau, Timothée Flutre, Christopher Sauvage, Jean‐Marc Audergon, Jean‐Luc Regnard
Software Mentions: 5
Published: about 4 years ago

10.1534/g3.116.037556

Construction of a High-Density American Cranberry (Vaccinium macrocarponAit.) Composite Map Using Genotyping-by-Sequencing for Multi-pedigree Linkage Mapping
Cited by: 27
Author(s): Brandon Schlautman, Giovanny Covarrubias‐Pazaran, Luis Diaz‐Garcia, Massimo Iorizzo, James J. Polashock, Edward Grygleski, Nicholi Vorsa, Juan Zalapa
Software Mentions: 4
Published: over 7 years ago

10.3390/plants9070829

Identification of Quantitative Trait Loci Relating to Flowering Time, Flag Leaf and Awn Characteristics in a Novel Triticum dicoccum Mapping Population
Cited by: 8
Author(s): Tally I C Wright, Angela C. Burnett, Howard Griffiths, Maxime Kadner, James S. Powell, Hugo R. Oliveira, Fiona Leigh
Software Mentions: 4
Published: over 4 years ago

10.1016/j.fochx.2020.100093

Genetic variation in wheat grain quality is associated with differences in the galactolipid content of flour and the gas bubble properties of dough liquor
Cited by: 8
Author(s): Byoung Koun Min, Louise J. Salt, Peter J. Wilde, Ondřej Kosík, Kirsty L. Hassall, Alexandra M. Przewieslik‐Allen, Amanda Burridge, Mervin Poole, J. W. Snape, Luzie U. Wingen, Richard P. Haslam, Simon Griffiths, Peter R. Shewry
Software Mentions: 4
Published: over 4 years ago

10.1007/s00122-019-03476-0

QTL mapping and successful introgression of the spring wheat-derived QTL Fhb1 for Fusarium head blight resistance in three European triticale populations
Cited by: 27
Author(s): Marine Ollier, Vincent Talle, Anne‐Laure Brisset, Zoé Le Bihan, Simon Duerr, Marc Lemmens, Ellen Goudemand, Olivier Robert, Jean‐Louis Hilbert, Hermann Buerstmayr
Software Mentions: 3
Published: almost 5 years ago

10.3389/fpls.2021.667910

Novel Salinity Tolerance Loci in Chickpea Identified in Glasshouse and Field Environments
Cited by: 19
Author(s): Judith Atieno, Timothy D. Colmer, Julian Taylor, Yongle Li, John Quealy, Lukasz Kotula, Dion Nicol, Duong Thuy Nguyen, Chris Brien, Peter Langridge, Janine Croser, J. F. Hayes, Tim Sutton
Software Mentions: 3
Published: over 3 years ago

10.3389/fpls.2021.703283

Lens orientalis Contributes Quantitative Trait Loci and Candidate Genes Associated With Ascochyta Blight Resistance in Lentil
Cited by: 10
Author(s): Rama Harinath Reddy Dadu, Ido Bar, Rebecca Ford, Prabhakaran Thanjavur Sambasivam, Janine Croser, Federico M. Ribalta, Sukhjiwan Kaur, Shimna Sudheesh, Dorin Gupta
Software Mentions: 3
Published: over 3 years ago

10.3390/genes12040604

QTL Analysis of Five Morpho-Physiological Traits in Bread Wheat Using Two Mapping Populations Derived from Common Parents
Cited by: 7
Author(s): Paolo Vitale, Fabio Fania, Salvatore Esposito, Ivano Pecorella, Nicola Pecchioni, Samuela Palombieri, Francesco Sestili, D. Lafiandra, Francesca Taranto, Pasquale De Vita
Software Mentions: 3
Published: over 3 years ago

10.1186/s12864-016-3439-y

An SNP-based saturated genetic map and QTL analysis of fruit-related traits in Zucchini using Genotyping-by-sequencing
Cited by: 61
Author(s): Javier Montero‐Pau, José Blanca, Cristina Esteras, Eva Ma. Martínez-Pérez, Pedro Sánchez Gómez, Antonio J. Monforte, Joaquı́n Cañizares, Belén Picó
Software Mentions: 2
Published: almost 8 years ago

10.1111/pbi.12860

De novo assembly of the zucchini genome reveals a whole‐genome duplication associated with the origin of the Cucurbita genus
Cited by: 131
Author(s): Javier Montero‐Pau, José Blanca, Aureliano Bombarely, Peio Ziarsolo, Miguel Leiva-Brondo, Carlos Martí-Gómez, M. Ferriol, Pedro Sánchez Gómez, Manuel Jamilena, Lukas A. Mueller, Belén Picó
Software Mentions: 2
Published: about 7 years ago

10.1371/journal.pgen.1008520

Hybridization promotes asexual reproduction in Caenorhabditis nematodes
Cited by: 11
Author(s): Piero Lamelza, Janet M. Young, Luke M. Noble, Lews Caro, Arielle Isakharov, Meenakshi Palanisamy, Matthew V. Rockman, Harmit S. Malik, Michael Ailion
Software Mentions: 2
Published: about 5 years ago

10.3389/fpls.2019.00782

Genetics of Greenbug Resistance in Synthetic Hexaploid Wheat Derived Germplasm
Cited by: 10
Author(s): Leonardo Crespo‐Herrera, Ravi P. Singh, M.P. Reynolds, Julio Huerta Espino
Software Mentions: 2
Published: over 5 years ago

10.3390/genes12020243

Discovery of a Major QTL Controlling Trichome IV Density in Tomato Using K-Seq Genotyping
Cited by: 9
Author(s): Estefanía Mata-Nicolás, Javier Montero‐Pau, Esther Gimeno-Páez, Ana L. Garcı́a-Pérez, Peio Ziarsolo, Cristina Esteras, Esther van der Knaap, María José Díez
Software Mentions: 2
Published: almost 4 years ago

10.1093/jxb/erw125

High resolution mapping of traits related to whole-plant transpiration under increasing evaporative demand in wheat
Cited by: 51
Author(s): Rémy Schoppach, Julian Taylor, Elisabeth Majerus, Elodie Claverie, Ute Baumann, Radosław Suchecki, Delphine Fleury, Walid Sadok
Software Mentions: 2
Published: almost 9 years ago

10.1093/jxb/erab044

The wheat Seven in absentia gene is associated with increases in biomass and yield in hot climates
Cited by: 9
Author(s): Pauline Thomelin, Julien Bonneau, Chris Brien, Radosław Suchecki, Ute Baumann, Priyanka Kalambettu, Peter Langridge, Penny J. Tricker, Delphine Fleury
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12284-021-00471-2

Stable and Novel Quantitative Trait Loci (QTL) Confer Narrow Root Cone Angle in an Aerobic Rice (Oryza sativa L.) Production System
Cited by: 11
Author(s): Ricky Vinarao, Christopher Proud, Xiaolu Zhang, Peter Snell, S. Fukai, Jaquie Mitchell
Software Mentions: 2
Published: almost 4 years ago

10.1007/s00122-021-03910-2

A Trimethylguanosine Synthase1-like (TGS1) homologue is implicated in vernalisation and flowering time control
Cited by: 8
Author(s): Candy M. Taylor, Gagan Garg, Jens Berger, Federico M. Ribalta, Janine Croser, Karam B. Singh, Wallace Cowling, Lars G. Kamphuis, Matthew N. Nelson
Software Mentions: 2
Published: over 3 years ago

10.1534/g3.118.200835

Determining the Genetic Architecture of Reproductive Stage Drought Tolerance in Wheat Using a Correlated Trait and Correlated Marker Effect Model
Cited by: 23
Author(s): Rudy Dolferus, Saravanan Thavamanikumar, Harriet Sangma, Sue Kleven, Xiaomei Wallace, Kerrie Forrest, G. J. Rebetzke, Matthew Hayden, Lauren Borg, Alison Smith, Brian R Cullis
Software Mentions: 1
Published: almost 6 years ago

10.1371/journal.pone.0228951

Segregation distortion: Utilizing simulated genotyping data to evaluate statistical methods
Cited by: 9
Author(s): Alexander Coulton, Alexandra M. Przewieslik‐Allen, Amanda Burridge, Daniel S. Shaw, Keith J. Edwards, Gary Barker
Software Mentions: 1
Published: almost 5 years ago

10.1007/s00122-017-2981-6

Loci on chromosomes 1A and 2A affect resistance to tan (yellow) spot in wheat populations not segregating for tsn1
Cited by: 13
Author(s): M. Shankar, Dorthe Jorgensen, Julian Taylor, K. J. Chalmers, Rebecca Fox, Grant Hollaway, Stephen M. Neate, Mark S. McLean, Elysia Vassos, H. Golzar, Robert Loughman, D. E. Mather
Software Mentions: 1
Published: over 7 years ago

10.1111/pbi.13492

A chromosome‐scale assembly of allotetraploid Brassica juncea (AABB) elucidates comparative architecture of the A and B genomes
Cited by: 50
Author(s): Kumar Paritosh, Satish Kumar Yadava, Priyansha Singh, Latika Bhayana, Arnab Mukhopadhyay, Vibha Gupta, Naveen C. Bisht, Jian Wei Zhang, David Kudrna, Dario Copetti, Rod A. Wing, V. B. Reddy Lachagari, Akshay K. Pradhan, Deepak Pental
Software Mentions: 1
Published: almost 4 years ago

10.1186/s12870-021-03023-4

Genetic mapping and QTL analysis for peanut smut resistance
Cited by: 5
Author(s): Francisco J. de Blas, Cecilia Bruno, Renée S. Arias, Carolina Ballén‐Taborda, Eva Mamani, Claudio Oddino, Melina Rosso, Beatriz P. Costero, Marina Bressano, Juan H. Soave, Sara J. Soave, Mario I. Buteler, J. Guillermo Seijo, Alicia N. Massa
Software Mentions: 1
Published: over 3 years ago

10.1007/s00122-018-3161-z

QTL mapping and validation of fertility restoration in West African sorghum A1 cytoplasm and identification of a potential causative mutation for Rf2
Cited by: 9
Author(s): Moctar Kante, H. Frederick W. Rattunde, Baloua Nebié, Eva Weltzien, Bettina I. G. Haussmann, Willmar L. Leiser
Software Mentions: 1
Published: over 6 years ago

10.1186/s12864-016-2802-3

Exploiting genotyping by sequencing to characterize the genomic structure of the American cranberry through high-density linkage mapping
Cited by: 31
Author(s): Giovanny Covarrubias‐Pazaran, Luis Diaz‐Garcia, Brandon Schlautman, Joseph Deutsch, Walter Salazar, Miguel Hernandez-Ochoa, Edward Grygleski, Shawn A. Steffan, Massimo Iorizzo, James J. Polashock, Nicholi Vorsa, Juan Zalapa
Software Mentions: 1
Published: over 8 years ago

10.1007/s00122-020-03708-8

Comparative mapping and validation of multiple disease resistance QTL for simultaneously controlling common and dwarf bunt in bread wheat
Cited by: 13
Author(s): Almuth Elise Muellner, Maria Buerstmayr, Bobur Eshonkulov, David Hole, Sebastian Michel, Julia Hagenguth, Bernadette Pachler, Ricarda Pernold, Hermann Buerstmayr
Software Mentions: 1
Published: about 4 years ago

10.1038/s41598-018-28294-0

Genotype-Corrector: improved genotype calls for genetic mapping in F2 and RIL populations
Cited by: 20
Author(s): Chenyong Miao, Jingping Fang, Delin Li, Pingping Liang, Xingtan Zhang, Jinliang Yang, James C. Schnable, Haibao Tang
Software Mentions: 1
Published: over 6 years ago

10.3389/fpls.2019.01690

A Mapped Locus on LG A6 of Brassica juncea Line Tumida Conferring Resistance to White Rust Contains a CNL Type R Gene
Cited by: 21
Author(s): Latika Bhayana, Kumar Paritosh, Heena Arora, Satish Kumar Yadava, Priyansha Singh, Divakar Nandan, Arnab Mukhopadhyay, Vibha Gupta, Akshay K. Pradhan, Deepak Pental
Software Mentions: 1
Published: almost 5 years ago

10.3389/fpls.2021.721631

Genetic Analysis of Heterosis for Yield Influencing Traits in Brassica juncea Using a Doubled Haploid Population and Its Backcross Progenies
Cited by: 12
Author(s): Aakanksha, Satish Kumar Yadava, Bal Govind Yadav, Vibha Gupta, Arnab Mukhopadhyay, Deepak Pental, Akshay K. Pradhan
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2018.01622

Stable Quantitative Resistance Loci to Blackleg Disease in Canola (Brassica napus L.) Over Continents
Cited by: 35
Author(s): Harsh Raman, Rosy Raman, Simon Diffey, Yu Qiu, Brett McVittie, Denise M. Barbulescu, P. A. Salisbury, S. J. Marcroft, Régine Delourme
Software Mentions: 1
Published: about 6 years ago

10.3389/fpls.2017.00125

Genome-Wide Single Nucleotide Polymorphism Discovery and the Construction of a High-Density Genetic Map for Melon (Cucumis melo L.) Using Genotyping-by-Sequencing
Cited by: 23
Author(s): Chih Shiang Chang, Yuhua Wang, Chih‐Wei Tung
Software Mentions: 1
Published: almost 8 years ago

10.1534/g3.117.300376

Genotyping by Sequencing in Almond: SNP Discovery, Linkage Mapping, and Marker Design
Cited by: 23
Author(s): Shashi N. Goonetilleke, Timothy J. March, M. Wirthensohn, Pere Arús, Amanda R. Walker, D. E. Mather
Software Mentions: 1
Published: almost 7 years ago

Ecosyste.ms: Papers

Projects: cran: ASMap

Papers Mentioning ASMap 36