Ecosyste.ms: Papers

pypi: Shapely

Manipulation and analysis of geometric objects
Papers that mentioned: 19

pypi: MFDFA

Multifractal Detrended Fluctuation Analysis in Python
Papers that mentioned: 19

pypi: Collector

Visym Collector
Papers that mentioned: 19

pypi: scLVM

scLVM
Papers that mentioned: 19

pypi: rand

Generate String from regex pattern
Papers that mentioned: 19

pypi: Pylon

Port of MATPOWER to Python.
Papers that mentioned: 19

pypi: VGA

Python package implements the Group Additivity (GA) method for estimating thermodynamic properties
Papers that mentioned: 19

pypi: pytraj

Python API for cpptraj: a data analysis package for biomolecular simulation
Papers that mentioned: 19

pypi: lab

Benchmark your code
Papers that mentioned: 19

pypi: Meteor

Mediator pattern, interface inspired by jbogard/MediatR
Papers that mentioned: 19

pypi: SLC

A tool that allows you to connect to and run SQL commands to an SQLite3 database easily.
Papers that mentioned: 19

pypi: IES

iPIPA
Papers that mentioned: 19

pypi: Fiona

Fiona reads and writes spatial data files
Papers that mentioned: 19

pypi: GenomeBrowser

Python classes for making Genomebrowser snapshots.
Papers that mentioned: 19

pypi: S4

Fast and cheap synchronisation of files using Amazon S3
Papers that mentioned: 19

pypi: capture

Capture stdout and/or stderr
Papers that mentioned: 19

pypi: metaplot

metaplot
Papers that mentioned: 19

pypi: filter

Papers that mentioned: 19

pypi: TextGrid

Praat TextGrid manipulation.
Papers that mentioned: 19

pypi: designer

Student-friendly and evidence-based visual graphics library.
Papers that mentioned: 19

pypi: theta

Deep learning toolbox for end-to-end text information extraction tasks.
Papers that mentioned: 19

pypi: robust

Robust computational geometry predicates.
Papers that mentioned: 19

pypi: beta

Develop soon
Papers that mentioned: 19

pypi: DAWG

Fast and memory efficient DAWG (DAFSA) for Python
Papers that mentioned: 19

pypi: pomp

Screen scraping and web crawling framework
Papers that mentioned: 19

pypi: RTM

Numerical Computations for Radiative Transfer Modelling
Papers that mentioned: 19

pypi: MUSiCC

MUSICC: A marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome.
Papers that mentioned: 19

pypi: pydicom

A pure Python package for reading and writing DICOM data
Papers that mentioned: 19

pypi: ARGs-OAP

test version
Papers that mentioned: 19

pypi: ridge

Python Machine Learning Library specialized in L2R and Recommendation.
Papers that mentioned: 19

pypi: mygene

Python Client for MyGene.Info services.
Papers that mentioned: 19

pypi: bias

tools to track statistical bias
Papers that mentioned: 19

pypi: SC

Easily control SuperCollider sound server from python
Papers that mentioned: 19

pypi: GenomeDiagram

Genome and Biological Sequence Schematic Diagram Library
Papers that mentioned: 18

pypi: Pacific

Pacific
Papers that mentioned: 18

pypi: iCount

Computational pipeline for analysis of iCLIP data
Papers that mentioned: 18

pypi: regex

Alternative regular expression module, to replace re.
Papers that mentioned: 18

pypi: classify

Generate concrete Class documentation for Python Classes.
Papers that mentioned: 18

pypi: enrichr

Security Enrichment Framework
Papers that mentioned: 18

pypi: merlin

The building blocks of workflows!
Papers that mentioned: 18

pypi: Unimod

simple wrapper around the Unimod amino acid modificatins database
Papers that mentioned: 18

pypi: nf-core

Helper tools for use with nf-core Nextflow pipelines.
Papers that mentioned: 18

pypi: covid

Python package to get information regarding the novel corona virus provided by Johns Hopkins university and worldometers.info
Papers that mentioned: 18

pypi: prediction

Django skeleton project
Papers that mentioned: 18

pypi: SciTools

Python library for scientific computing
Papers that mentioned: 18

pypi: CODATA

All CODATA constants with units, uncertainty and description.
Papers that mentioned: 18

pypi: ccs

Crypto currencies stocks (ccs) is Python package for communication with stocks which are traiding with crypto currencies. Documentation is placed http://cryptocurrenciesstocks.readthedocs.io
Papers that mentioned: 18

pypi: encore

Low-level core modules for building Python applications
Papers that mentioned: 18

pypi: LIA

An assistant to help convert/import data to ledger-cli
Papers that mentioned: 18

pypi: gdtools

GeneDock command-line client for interacting with GeneDock platform
Papers that mentioned: 18

pypi: CAMSA

CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies
Papers that mentioned: 18

pypi: fastai

fastai simplifies training fast and accurate neural nets using modern best practices
Papers that mentioned: 18

pypi: nipype

Neuroimaging in Python: Pipelines and Interfaces
Papers that mentioned: 18

pypi: TIE

A minimalist template ENGINE allowing users to define their own simple templating languages.
Papers that mentioned: 18

pypi: PyML

A python HTML builder library.
Papers that mentioned: 18

pypi: libraries

Papers that mentioned: 18

pypi: destiny

Papers that mentioned: 18

pypi: GML

Automating Data Science
Papers that mentioned: 18

pypi: Calculations

To calculate equations and draw diagrams
Papers that mentioned: 18

pypi: multi

Comprehensive library for univariate and multivariate time series analysis
Papers that mentioned: 18

pypi: rs

A Simple Remote Server and Training Manager.
Papers that mentioned: 18

pypi: review

upload script for Rietveld code review tool
Papers that mentioned: 18

pypi: BNPMDA

description
Papers that mentioned: 18

pypi: with

A shell context manager
Papers that mentioned: 18

pypi: insane

A versatile tool for building membranes and/or solvent with proteins.
Papers that mentioned: 18

pypi: resources

Resource centered REST API clients
Papers that mentioned: 18

pypi: Adept

Simple binding for Adept
Papers that mentioned: 18

pypi: PePr

Peak-calling and Prioritization pipeline for replicated ChIP-Seq data
Papers that mentioned: 18

pypi: bio

bio
Papers that mentioned: 18

pypi: pynast

The Python Nearest Alignment Space Termination tool
Papers that mentioned: 18

pypi: tmod

A tool to work with tModLoader .tmod files.
Papers that mentioned: 18

pypi: k

enums for Python
Papers that mentioned: 18

pypi: pyseer

Papers that mentioned: 17

pypi: summarize

A simple summarize tool
Papers that mentioned: 17

pypi: CRADLE

Correct Read Counts and Analysis of Differently Expressed Regions
Papers that mentioned: 17

pypi: fr

A program to print resources in delicious flavors.
Papers that mentioned: 17

pypi: PyDSTool

Python dynamical systems simulation and modeling
Papers that mentioned: 17

pypi: NucleoATAC

python package for calling nucleosomes with ATAC-Seq
Papers that mentioned: 17

pypi: colony

Colony Framework
Papers that mentioned: 17

pypi: nexus

An extendable admin interface
Papers that mentioned: 17

pypi: clang

libclang python bindings
Papers that mentioned: 17

pypi: space

UNKNOWN
Papers that mentioned: 17

pypi: Compositions

Contains composition of useful structures
Papers that mentioned: 17

pypi: science

Papers that mentioned: 17

pypi: AMAT

Aerocapture Mission Analysis Tool
Papers that mentioned: 17

pypi: microscope

An interface for control of microscope devices.
Papers that mentioned: 17

pypi: Nika

Package for process data from some source
Papers that mentioned: 17

pypi: DAD

Deliver Asynchronous Data
Papers that mentioned: 17

pypi: Paver

Easy build, distribution and deployment scripting
Papers that mentioned: 17

pypi: shapeit

It's Shapely with projections and some other conveniences!
Papers that mentioned: 17

pypi: NiftyNet

An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
Papers that mentioned: 17

pypi: shape

2D shapes abstraction
Papers that mentioned: 17

pypi: InSilicoSeq

a sequencing simulator
Papers that mentioned: 17

pypi: joblib

Lightweight pipelining with Python functions
Papers that mentioned: 17

pypi: QUIT

Papers that mentioned: 17

pypi: originpro

OriginPro Utilities
Papers that mentioned: 17

pypi: imread

imread: Image reading library
Papers that mentioned: 17

pypi: tuxedo

Python3 bindings for writing Oracle Tuxedo clients and servers
Papers that mentioned: 17

pypi: compass

Compass is a geolocation API client library offering you a flexible set of lookup strategies across a range of web services.
Papers that mentioned: 17

pypi: dock

Batch job queue for ML inference.
Papers that mentioned: 17