Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: robust

https://packages.ecosyste.ms/registries/pypi.org/packages/robust

Robust computational geometry predicates.
11 versions
Latest release: almost 4 years ago
7 dependent packages
49 downloads last month

Papers Mentioning robust 19

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Cited by: 49,504
Author(s): Michael I. Love, Wolfgang Huber, Simon Anders
Software Mentions: 16
Published: almost 10 years ago

10.1371/journal.pntd.0009232

Intestinal protozoan infections shape fecal bacterial microbiota in children from Guinea-Bissau
Cited by: 8
Author(s): Sebastian von Huth, Louise B. Thingholm, Poul Erik Kofoed, Corinna Bang, Malte Rühlemann, André Franke, Uffe Holmskov
Software Mentions: 15
Published: over 3 years ago

10.12688/f1000research.8987.2

From reads to genes to pathways: differential expression analysis of RNA-Seq experiments using Rsubread and the edgeR quasi-likelihood pipeline
Cited by: 415
Author(s): Yunshun Chen, Aaron T. L. Lun, Gordon K. Smyth
Software Mentions: 15
Published: over 8 years ago

10.1186/s12859-015-0794-7

Evaluation of methods for differential expression analysis on multi-group RNA-seq count data
Cited by: 47
Author(s): Min Tang, Jianqiang Sun, Kentaro Shimizu, Koji Kadota
Software Mentions: 13
Published: about 9 years ago

10.3390/brainsci10100715

Attention Networks in ADHD Adults after Working Memory Training with a Dual n-Back Task
Cited by: 7
Author(s): Masashi Dotare, Michel Bader, Sarah K. Mesrobian, Yoshiyuki Asai, Alessandro E. P. Villa, Alessandra Lintas
Software Mentions: 10
Published: about 4 years ago

10.1371/journal.pone.0250231

Changing parental feeding practices through web-based interventions: A systematic review and meta-analysis
Cited by: 15
Author(s): Ana Coelho Gomes, Ana Isabel Pereira, Magda Sofia Roberto, Klara Boraska, Luísa Barros
Software Mentions: 10
Published: over 3 years ago

10.1186/1471-2164-16-S7-S14

Differential expression analysis of RNA sequencing data by incorporating non-exonic mapped reads
Cited by: 12
Author(s): Hung I Harry Chen, Yuanhang Liu, Yi Zou, Zhao Lai, Devanand Sarkar, Yufei Huang, Yidong Chen
Software Mentions: 9
Published: over 9 years ago

10.1186/1471-2180-14-171

Colony-live — a high-throughput method for measuring microbial colony growth kinetics— reveals diverse growth effects of gene knockouts in Escherichia coli
Cited by: 38
Author(s): Rikiya Takeuchi, Takeyuki Tamura, Toru Nakayashiki, Yuzo Tanaka, Ai Muto, Barry L. Wanner, Hirotada Mori
Software Mentions: 7
Published: over 10 years ago

10.1186/s12864-018-5390-6

Stability of methods for differential expression analysis of RNA-seq data
Cited by: 14
Author(s): Bingqing Lin, Zhen Pang
Software Mentions: 7
Published: almost 6 years ago

10.1017/cts.2017.310

RRApp, a robust randomization app, for clinical and translational research
Cited by: 9
Author(s): Chengcheng Tu, Emma K. T. Benn
Software Mentions: 6
Published: almost 7 years ago

10.1371/journal.pone.0125224

An Iterative Leave-One-Out Approach to Outlier Detection in RNA-Seq Data
Cited by: 31
Author(s): Nysia I. George, John F. Bowyer, Nathaniel M. Crabtree, Ching‐Wei Chang
Software Mentions: 4
Published: over 9 years ago

10.1038/srep24204

Colony-Level Differences in the Scaling Rules Governing Wood Ant Compound Eye Structure
Cited by: 17
Author(s): Craig D. Perl, Jeremy E. Niven
Software Mentions: 4
Published: over 8 years ago

10.1186/s40359-020-00486-2

The Dark Triad of personality and attitudes toward cognitive enhancement
Cited by: 5
Author(s): Eric Mayor, Maxime Daehne, Renzo Bianchi
Software Mentions: 3
Published: about 4 years ago

10.1089/cell.2018.0008

Porcine Fetal-Derived Fibroblasts Alter Gene Expression and Mitochondria to Compensate for Hypoxic Stress During Culture
Cited by: 4
Author(s): Bethany R. Mordhorst, Shaun Murphy, Martin Schauflinger, Shirley Rojas-Salazar, Tieming Ji, Susanta K. Behura, Kevin D. Wells, Jonathan A. Green, Randall S. Prather
Software Mentions: 3
Published: over 6 years ago

10.1002/osp4.452

Effectiveness of behavioral interventions and behavior change techniques for reducing soft drink intake in disadvantaged adolescents: A systematic review and meta‐analysis
Cited by: 6
Author(s): Sara S. Shagiwal, E Groenestein, Astrid Schop-Etman, Joran Jongerling, Jeroen van der Waal, Gera Noordzij, Semiha Denktaş
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0021089

So Small, So Loud: Extremely High Sound Pressure Level from a Pygmy Aquatic Insect (Corixidae, Micronectinae)
Cited by: 36
Author(s): Jérôme Sueur, David Mackie, James F. C. Windmill
Software Mentions: 3
Published: over 13 years ago

10.1371/journal.pone.0127882

Robust Linear Models for Cis-eQTL Analysis
Cited by: 7
Author(s): Mattias Rantalainen, Cecilia M. Lindgren, Connor Holmes
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0148363

Seasonal Variation in Shell Calcification of Planktonic Foraminifera in the NE Atlantic Reveals Species-Specific Response to Temperature, Productivity, and Optimum Growth Conditions
Cited by: 38
Author(s): Manuel F. G. Weinkauf, José G. Kunze, Joanna J Waniek, Michal Kučera
Software Mentions: 2
Published: almost 9 years ago

10.1523/JNEUROSCI.2732-16.2017

Parallel Regulation of Memory and Emotion Supports the Suppression of Intrusive Memories
Cited by: 107
Author(s): Pierre Gagnepain, Justin C. Hulbert, Michael C. Anderson
Software Mentions: 2
Published: over 7 years ago