Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: ccs
https://packages.ecosyste.ms/registries/pypi.org/packages/ccs
Crypto currencies stocks (ccs) is Python package for communication with stocks which are traiding with crypto currencies. Documentation is placed http://cryptocurrenciesstocks.readthedocs.io
8 versions
Latest release: over 7 years ago
21 downloads last month
Papers Mentioning ccs 18
10.1534/g3.120.401612
A Reference Genome Sequence for Giant SequoiaCited by: 53
Author(s): Alison Dawn Scott, Aleksey V. Zimin, Daniela Puiu, Rachael E. Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam J. Bogdanove, Emily E. Burns, Jill L. Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale
Software Mentions: 11
Published: about 4 years ago
10.3390/ijms21218148
Utilizing PacBio Iso-Seq for Novel Transcript and Gene Discovery of Abiotic Stress Responses in Oryza sativa L.Cited by: 25
Author(s): Stephanie Schaarschmidt, Axel Fischer, Lovely Mae F Lawas, Rejbana Alam, Endang M. Septiningsih, Julia Bailey‐Serres, Krishna Jagadish, Bruno Huettel, Dirk K. Hincha, Ellen Zuther
Software Mentions: 11
Published: about 4 years ago
10.1186/s13059-020-1935-5
Opportunities and challenges in long-read sequencing data analysisCited by: 1,295
Author(s): Shanika L. Amarasinghe, Shian Su, Xueyi Dong, Luke Zappia, Matthew E. Ritchie, Quentin Gouil
Software Mentions: 9
Published: almost 5 years ago
10.1186/s12864-020-07123-7
Illuminating the dark side of the human transcriptome with long read transcript sequencingCited by: 76
Author(s): Richard Kuo, Yuanyuan Cheng, Runxuan Zhang, John W. Brown, Jacqueline Smith, Alan Archibald, David W. Burt
Software Mentions: 8
Published: about 4 years ago
10.1128/JVI.00500-19
Single-Cell Virus Sequencing of Influenza Infections That Trigger Innate ImmunityCited by: 81
Author(s): Alan D. Russell, Elizaveta Elshina, Jacob R. Kowalsky, Aartjan J.W. te Velthuis, Jesse D. Bloom
Software Mentions: 6
Published: over 5 years ago
10.1093/g3journal/jkab189
Long-read transcriptome and other genomic resources for the angiosperm <i>Silene noctiflora</i>Cited by: 7
Author(s): Alissa M. Williams, Michael W. Itgen, Amanda K. Broz, Olivia G. Carter, Daniel B Sloan
Software Mentions: 6
Published: over 3 years ago
10.7554/eLife.59404
Massively multiplex single-molecule oligonucleosome footprintingCited by: 41
Author(s): Nour J. Abdulhay, Christopher A. McNally, Laura J Hsieh, Sivakanthan Kasinathan, Aidan M. Keith, Laurel S Estes, Mehran Karimzadeh, Jason G. Underwood, Hani Goodarzi, Geeta J. Narlikar, Vijay Ramani
Software Mentions: 5
Published: almost 4 years ago
10.1186/s12864-020-6769-8
High-resolution profile of transcriptomes reveals a role of alternative splicing for modulating response to nitrogen in maizeCited by: 20
Author(s): Yuancong Wang, Jing Xu, Min Ge, Lei Ning, Meng-Mei Hu, Han Zhao
Software Mentions: 5
Published: over 4 years ago
10.1186/s13059-021-02505-w
Mapping and modeling the genomic basis of differential RNA isoform expression at single-cell resolution with LR-Split-seqCited by: 23
Author(s): Elisabeth Rebboah, Fairlie Reese, Katherine Williams, Gabriela Balderrama-Gutierrez, Cassandra McGill, Diane Trout, Isaryhia Rodriguez, Heidi Yahan Liang, B Wold, A Mortazavi
Software Mentions: 5
Published: about 3 years ago
10.1093/gigascience/giaa050
High-quality chromosome-scale assembly of the walnut (Juglans regia L.) reference genomeCited by: 64
Author(s): Annarita Marrano, Monica Britton, Paulo A. Zaini, Aleksey V. Zimin, Rachael E. Workman, Daniela Puiu, Luca Bianco, Erica A. Di Pierro, Brian Allen, Sandeep Chakraborty, Michela Troggio, Charles A. Leslie, Winston Timp, Abhaya M. Dandekar, Steven L. Salzberg, David B. Neale
Software Mentions: 3
Published: over 4 years ago
10.1038/s41598-021-90498-8
Evolution of networks of protein domain organizationCited by: 20
Author(s): M. Fayez Aziz, Gustavo Caetano‐Anollés
Software Mentions: 3
Published: over 3 years ago
10.3389/fmicb.2020.01758
A Refined View of Airway Microbiome in Chronic Obstructive Pulmonary Disease at Species and Strain-LevelsCited by: 31
Author(s): Zhang Wang, Haiyue Liu, Fengyan Wang, Yuqiong Yang, Xiaojuan Wang, Boxuan Chen, Martin R. Stämpfli, Hongwei Zhou, Wen‐Sheng Shu, Christopher E. Brightling, Zhenyu Liang, Rongchang Chen
Software Mentions: 2
Published: over 4 years ago
10.1186/s12915-021-00994-6
Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus SymbiodiniumCited by: 52
Author(s): Raúl A. González‐Pech, Timothy G. Stephens, Yibi Chen, Amin R. Mohamed, Yuanyuan Cheng, Surya Shah, Katherine E. Dougan, Michael D. A. Fortuin, Rémi Lagorce, David W. Burt, Debashish Bhattacharya, Mark A. Ragan, Cheong Xin Chan
Software Mentions: 2
Published: over 3 years ago
10.1186/s13059-020-02143-8
Long-read individual-molecule sequencing reveals CRISPR-induced genetic heterogeneity in human ESCsCited by: 20
Author(s): Chongwei Bi, Lin Wang, Baolei Yuan, Xuan Zhou, Li Yu, Sheng Wang, Yuhong Pang, Xin Gao, Yanyi Huang, Mo Li
Software Mentions: 2
Published: about 4 years ago
10.3389/fgene.2021.670727
CFH and CFHR Copy Number Variations in C3 Glomerulopathy and Immune Complex-Mediated Membranoproliferative GlomerulonephritisCited by: 9
Author(s): Rossella Piras, Matteo Breno, Elisabetta Valoti, Marta Alberti, Paraskevas Iatropoulos, Caterina Mele, Elena Bresin, Roberta Donadelli, Paola Cuccarolo, Richard J.H. Smith, Ariela Benigni, Giuseppe Remuzzi, Marina Noris
Software Mentions: 2
Published: over 3 years ago
10.1016/j.ymeth.2020.07.007
Sizing, stabilising, and cloning repeat-expansions for gene targeting constructsCited by: 1
Author(s): R. Nair, Charlotte Tibbit, David B. Thompson, Ross McLeod, Asif Nakhuda, Michelle Simon, Robert H. Baloh, Elizabeth Fisher, Adrian M. Isaacs, Thomas J. Cunningham
Software Mentions: 1
Published: over 3 years ago
10.1128/mSphere.00562-19
PacBio Amplicon Sequencing Method To Measure Pilin Antigenic Variation Frequencies of Neisseria gonorrhoeaeCited by: 5
Author(s): Egon A. Ozer, Lauren L. Prister, Shaohui Yin, Billy H. Ward, Stanimir S. Ivanov, H. Steven Seifert
Software Mentions: 1
Published: about 5 years ago