Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1534/g3.120.401612

https://doi.org/10.1534/g3.120.401612

Cited by: 53
Author(s): Alison Dawn Scott, Aleksey V. Zimin, Daniela Puiu, Rachael E. Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam J. Bogdanove, Emily E. Burns, Jill L. Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale
Published: over 3 years ago

Software Mentions 11

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: karyoploteR
Plot customizable linear genomes displaying arbitrary data
Papers that mentioned: 50
cran: BiocManager
Access the Bioconductor Project Package Repository
Papers that mentioned: 35
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: tidytree
A Tidy Tool for Phylogenetic Tree Data Manipulation
Papers that mentioned: 10
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
pypi: ccs
Crypto currencies stocks (ccs) is Python package for communication with stocks which are traiding with crypto currencies. Documentation is placed http://cryptocurrenciesstocks.readthedocs.io
Papers that mentioned: 18
pypi: jellyfish
Approximate and phonetic matching of strings.
Papers that mentioned: 33
pypi: lima
Lightweight Marshalling of Python 3 Objects.
Papers that mentioned: 40
pypi: tidytree
manager directories
Papers that mentioned: 10
pypi: trf
A parser and dumper for the fide approved tournament report format: trf
Papers that mentioned: 7