Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: Paver
https://packages.ecosyste.ms/registries/pypi.org/packages/Paver
Easy build, distribution and deployment scripting
28 versions
Latest release: almost 7 years ago
5 dependent packages
49,609 downloads last month
Papers Mentioning Paver 17
10.1038/s41598-017-01179-4
Monitoring global protein thiol-oxidation and protein S-mycothiolation in Mycobacterium smegmatis under hypochlorite stressCited by: 42
Author(s): Mélanie Hillion, Jörg Bernhardt, Tobias Busche, Martina Rossius, Sandra Maaß, Dörte Becher, Mamta Rawat, Markus Wirtz, Rüdiger Hell, Christian Rückert, Jörn Kalinowski, Haike Antelmann
Software Mentions: 4
Published: over 7 years ago
10.1038/s41598-017-10059-w
A global Staphylococcus aureus proteome resource applied to the in vivo characterization of host-pathogen interactionsCited by: 39
Author(s): Stephan Michalik, Maren Depke, Annette Murr, Manuela Gesell Salazar, Ulrike Kusebauch, Zhi Sun, Tanja Meyer, Kristin Surmann, Henrike Pförtner, Petra Hildebrandt, Stefan Weiß, Laura M Palma Medina, Melanie Gutjahr, Elke Hammer, Dörte Becher, T Pribýl, Sven Hammerschmidt, Eric W. Deutsch, Samuel L. Bader, Michael Hecker, Robert L. Moritz, Ulrike Mäder, Uwe Völker, Frank Schmidt
Software Mentions: 3
Published: about 7 years ago
10.3390/microorganisms8020244
Responses of Acidobacteria Granulicella sp. WH15 to High Carbon Revealed by Integrated Omics AnalysesCited by: 5
Author(s): Ohana Y.A. Costa, Marcelo M. Zerillo, Daniela Zühlke, Anna M. Kielak, Agata Pijl, Katharina Riedel, Eiko E. Kuramae
Software Mentions: 3
Published: almost 5 years ago
10.3389/fmicb.2018.02371
A Metabolic Labeling Strategy for Relative Protein Quantification in Clostridioides difficileCited by: 4
Author(s): Anke Trautwein-Schult, Sandra Maaß, Kristina Plate, Andreas Otto, Dörte Becher
Software Mentions: 3
Published: about 6 years ago
10.1080/21505594.2017.1325064
Signatures of cytoplasmic proteins in the exoproteome distinguish community- and hospital-associated methicillin-resistant<i>Staphylococcus aureus</i>USA300 lineagesCited by: 18
Author(s): Solomon Mekonnen, Laura M Palma Medina, Corinna Glasner, Eleni Tsompanidou, Anne de Jong, Stefano Grasso, Marc Schaffer, Ulrike Mäder, Anders Rhod Larsen, Heidi Gumpert, Henrik Westh, Uwe Völker, Andreas Otto, Dörte Becher, Jan Maarten van Dijl
Software Mentions: 3
Published: over 7 years ago
10.3389/fmicb.2019.03101
Proteomic Investigation Uncovers Potential Targets and Target Sites of Pneumococcal Serine-Threonine Kinase StkP and Phosphatase PhpPCited by: 25
Author(s): Claudia Hirschfeld, Alejandro Gómez-Mejía, Jürgen Bartel, Christian Hentschker, Manfred Rohde, Sandra Maaß, Sven Hammerschmidt, Dörte Becher
Software Mentions: 2
Published: almost 5 years ago
10.3389/fmicb.2020.01227
Impact of Different Trace Elements on the Growth and Proteome of Two Strains of Granulicella, Class “Acidobacteriia”Cited by: 14
Author(s): Ohana Y.A. Costa, Chidinma Oguejiofor, Daniela Zühlke, Cristine Chaves Barreto, Christine Wünsche, Katharina Riedel, Eiko E. Kuramae
Software Mentions: 2
Published: over 4 years ago
10.3390/antiox8120605
The Disulfide Stress Response and Protein S-thioallylation Caused by Allicin and Diallyl Polysulfanes in Bacillus subtilis as Revealed by Transcriptomics and ProteomicsCited by: 21
Author(s): Bui Khanh, Nguyen Thi Thu Huyen, Vu Van Loi, Martin C. H. Gruhlke, Marc Schaffer, Ulrike Mäder, Sandra Maaß, Dörte Becher, Jörg Bernhardt, Miriam Arbach, Chris J. Hamilton, Alan Slusarenko, Haike Antelmann
Software Mentions: 2
Published: almost 5 years ago
10.1186/s12934-019-1071-7
Comparative proteome analysis in an Escherichia coli CyDisCo strain identifies stress responses related to protein production, oxidative stress and accumulation of misfolded proteinCited by: 9
Author(s): Isabel Guerrero Montero, Katarzyna Magdalena Dolata, Rabea Schlüter, Gilles Malherbe, Susanne Sievers, Daniela Zühlke, Thomas Sura, Emma Davé, Katharina Riedel, Colin Robinson
Software Mentions: 2
Published: almost 6 years ago
10.1074/mcp.RA118.001036
Comparative Secretome Analyses of Human and Zoonotic Staphylococcus aureus Isolates CC8, CC22, and CC398Cited by: 25
Author(s): Tobias Busche, Mélanie Hillion, Vu Van Loi, David T. Berg, Birgit Walther, Torsten Semmler, Birgit Strommenger, Wolfgang Witte, Christiane Cuny, Alexander Mellmann, Mark A. Holmes, Jörn Kalinowski, Lorenz Adrian, Jörg Bernhardt, Haike Antelmann
Software Mentions: 2
Published: almost 6 years ago
10.3389/fcimb.2021.724569
An Innovative Protocol for Metaproteomic Analyses of Microbial Pathogens in Cystic Fibrosis SputumCited by: 6
Author(s): Alexander C. Graf, Johanna Striesow, Jan Pané‐Farré, Thomas Sura, Martina Wurster, Michael Lalk, Dietmar H. Pieper, Dörte Becher, Barbara C. Kahl, Katharina Riedel
Software Mentions: 2
Published: about 3 years ago
10.3389/fmicb.2018.03037
The AGXX® Antimicrobial Coating Causes a Thiol-Specific Oxidative Stress Response and Protein S-bacillithiolation in Staphylococcus aureusCited by: 27
Author(s): Vu Van Loi, Tobias Busche, Thalia Preuß, Jörn Kalinowski, Jörg Bernhardt, Haike Antelmann
Software Mentions: 2
Published: almost 6 years ago
10.3390/ijms22010108
A Label-Free Cellular Proteomics Approach to Decipher the Antifungal Action of DiMIQ, a Potent Indolo[2,3-b]Quinoline Agent, against Candida albicans BiofilmsCited by: 4
Author(s): Robert Żarnowski, Anna Jaromin, Agnieszka Zagórska, Eddie G. Dominguez, Katarzyna Sidoryk, Jerzy Gubernator, David R. Andes
Software Mentions: 2
Published: almost 4 years ago
10.1186/s12953-018-0132-x
In vitro gentamicin exposure alters caveolae protein profile in cochlear spiral ligament pericytesCited by: 2
Author(s): Elisa Ghelfi, Yohann Grondin, Emil Millet, Ádám Bartos, Magda E. Bortoni, Clara Oliveira Gomes dos Santos, Humberto Treviño-Villarreal, Rosalinda Sepúlveda, Rick A. Rogers
Software Mentions: 1
Published: over 6 years ago
10.3389/fmicb.2019.00258
Differential View on the Bile Acid Stress Response of Clostridioides difficileCited by: 23
Author(s): Susanne Sievers, Nicole G. Metzendorf, Silvia Dittmann, Daniel Troitzsch, Viola Gast, Sophie Marlen Tröger, Christian Wolff, Daniela Zühlke, Claudia Hirschfeld, Rabea Schlüter, Katharina Riedel
Software Mentions: 1
Published: almost 6 years ago
10.3389/fmicb.2014.00392
Comparative proteome analysis reveals conserved and specific adaptation patterns of Staphylococcus aureus after internalization by different types of human non-professional phagocytic host cellsCited by: 33
Author(s): Kristin Surmann, Stephan Michalik, Petra Hildebrandt, Philipp Gierok, Maren Depke, Lars Brinkmann, Jörg Bernhardt, Manuela Gesell Salazar, Zhi Sun, David Shteynberg, Ulrike Kusebauch, Robert L. Moritz, Bernd Wollscheid, Michael Lalk, Uwe Völker, Frank Schmidt
Software Mentions: 1
Published: over 10 years ago
10.1371/journal.ppat.1009604
RegAB Homolog of Burkholderia pseudomallei is the Master Regulator of Redox Control and involved in VirulenceCited by: 5
Author(s): Julia Phenn, Jan Pané‐Farré, Nikolai Meukow, Annelie Klein, Anne Troitzsch, Patrick Tan, Stephan Fuchs, Gabriel E. Wagner, Sabine Lichtenegger, Ivo Steinmetz, Christian Köhler
Software Mentions: 1
Published: over 3 years ago