Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: theta

https://packages.ecosyste.ms/registries/pypi.org/packages/theta

Deep learning toolbox for end-to-end text information extraction tasks.
18 versions
Latest release: over 2 years ago
53 downloads last month

Papers Mentioning theta 19

lme4GS: An R-Package for Genomic Selection
Cited by: 8
Author(s): Diana Caamal-Pat, Paulino Pérez‐Rodríguez, José Crossa, Ciro Velasco‐Cruz, Sergio Pérez-Elizalde, Mario Alberto Vázquez-Peña
Software Mentions: 8
Published: over 3 years ago

10.1098/rsos.210664

A giant nektobenthic radiodont from the Burgess Shale and the significance of hurdiid carapace diversity
Cited by: 13
Author(s): Jean‐Bernard Caron, Joseph Moysiuk
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0221487

AdequacyModel: An R package for probability distributions and general purpose optimization
Cited by: 36
Author(s): Pedro Rafael Diniz Marinho, Rodrigo B. Silva, Marcelo Bourguignon, Gauss M. Cordeiro, Saralees Nadarajah
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pcbi.1008495

Confidence intervals by constrained optimization—An algorithm and software package for practical identifiability analysis in systems biology
Cited by: 5
Author(s): Ivan I. Borisov, Eugeniy Metelkin
Software Mentions: 6
Published: about 4 years ago

10.3352/jeehp.2018.15.14

Post-hoc simulation study of computerized adaptive testing for the Korean Medical Licensing Examination
Cited by: 7
Author(s): Dong Gi Seo, Jeong‐Heui Choi
Software Mentions: 5
Published: over 6 years ago

10.1002/hbm.25245

Sex‐differences in network level brain dynamics associated with pain sensitivity and pain interference
Cited by: 12
Author(s): Junseok A. Kim, Rachael L. Bosma, Kasey S. Hemington, Anton Rogachov, Natalie R. Osborne, Jui‐Ching Cheng, Benjamin T. Dunkley, Karen D. Davis
Software Mentions: 4
Published: about 4 years ago

10.7554/eLife.19874

Structure in the variability of the basic reproductive number (R0) for Zika epidemics in the Pacific islands
Cited by: 34
Author(s): Clara Champagne, David Georges Salthouse, Paul Rácz, Van-Mai Cao-Lormeau, Benjamín Roche, Bernard Cazelles
Software Mentions: 3
Published: about 8 years ago

10.1186/1471-2288-11-61

Network meta-analysis of survival data with fractional polynomials
Cited by: 107
Author(s): Jeroen P. Jansen
Software Mentions: 3
Published: over 13 years ago

10.1107/S2059798319003528

How best to use photons
Cited by: 13
Author(s): Graeme Winter, Richard J. Gildea, Neil G. Paterson, John Beale, Markus Gerstel, Danny Axford, M. Vollmar, Katherine McAuley, R.L. Owen, Ralf Flaig, Alun Ashton, David R. Hall
Software Mentions: 3
Published: almost 6 years ago

10.1186/s12915-018-0593-5

Nuclear genome sequence of the plastid-lacking cryptomonad Goniomonas avonlea provides insights into the evolution of secondary plastids
Cited by: 33
Author(s): Ugo Cenci, Shannon J. Sibbald, Bruce A. Curtis, Ryoma Kamikawa, Laura Eme, Daniel Moog, Bernard Henrissat, Éric Maréchal, Malika Chabi, Christophe Djemiel, Andrew J. Roger, Eun-Soo Kim, John M. Archibald
Software Mentions: 2
Published: about 6 years ago

10.3389/fnagi.2021.657221

Effective Connectivity During Rest and Music Listening: An EEG Study on Parkinson’s Disease
Cited by: 5
Author(s): Emanuela Maggioni, Federica Arienti, Stella Minella, Francesca Mameli, Linda Borellini, Martina Nigro, F. Cogiamanian, Anna Maria Bianchi, S. Cerutti, S. Barbieri, Paolo Brambilla, Gianluca Ardolino
Software Mentions: 2
Published: over 3 years ago

10.1186/1471-2148-6-46

Cited by: 22
Author(s): Nicola J. Patron, Matthew B. Rogers, Patrick J. Keeling
Software Mentions: 1
Published: almost 19 years ago

10.1120/jacmp.v17i1.5808

Pinnacle<sup>3</sup>modeling and end-to-end dosimetric testing of a Versa HD linear accelerator with the Agility head and flattening filter-free modes
Cited by: 6
Author(s): Daniel Saenz, G. Narayanasamy, Wilbert Cruz, Nikos Papanikolaou
Software Mentions: 1
Published: almost 9 years ago

10.1186/1471-2148-5-56

Lineage-specific variations of congruent evolution among DNA sequences from three genomes, and relaxed selective constraints on rbcL in Cryptomonas (Cryptophyceae)
Cited by: 13
Author(s): Kerstin Hoef‐Emden, Hoang-Dung Tran, Michael Melkonian
Software Mentions: 1
Published: about 19 years ago

10.1371/journal.pone.0028645

Catastrophic Floods May Pave the Way for Increased Genetic Diversity in Endemic Artesian Spring Snail Populations
Cited by: 17
Author(s): Jessica Worthington Wilmer, Liisa Murray, Ché Elkin, Chris Wilcox, Darren Niejalke, Hugh P. Possingham
Software Mentions: 1
Published: about 13 years ago

10.1038/s41598-018-37436-3

The eastern extent of seasonal iron limitation in the high latitude North Atlantic Ocean
Cited by: 17
Author(s): Antony J. Birchill, N. T. Hartner, Korinna Kunde, Beatrix Siemering, Chris J. Daniels, David González-Santana, Angela Milne, Simon J. Ussher, Paul J. Worsfold, Kerstin Leopold, Stuart C. Painter, Maeve C. Lohan
Software Mentions: 1
Published: almost 6 years ago

10.1038/s41598-021-85210-9

Exploring a sustainable building’s impact on occupant mental health and cognitive function in a virtual environment
Cited by: 10
Author(s): Ming Hu, Madlen Simon, Spencer T. Fix, Anthony A. Vivino, Edward M. Bernat
Software Mentions: 1
Published: almost 4 years ago

10.1093/jxb/erv362

Presence of state transitions in the cryptophyte alga<i>Guillardia theta</i>
Cited by: 20
Author(s): Otilia Cheregi, Eva Kotabová, Ondřej Prášil, Wolfgang P. Schröder, Radek Kaňa, Christiane Funk
Software Mentions: 1
Published: over 9 years ago

10.1093/gbe/evz064

Nucleomorph Small RNAs in Cryptophyte and Chlorarachniophyte Algae
Cited by: 1
Author(s): Anna K. M. Åsman, Bruce A. Curtis, John M. Archibald
Software Mentions: 1
Published: over 5 years ago