Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: GML
https://packages.ecosyste.ms/registries/pypi.org/packages/GML
Automating Data Science
15 versions
Latest release: almost 4 years ago
115 downloads last month
Papers Mentioning GML 18
10.1186/1471-2105-14-S1-S1
Visualization of protein interaction networks: problems and solutionsCited by: 70
Author(s): Giuseppe Agapito, Pietro Hiram Guzzi, Mario Cannataro
Software Mentions: 7
Published: almost 12 years ago
10.1371/journal.pone.0143111
CentiServer: A Comprehensive Resource, Web-Based Application and R Package for Centrality AnalysisCited by: 85
Author(s): Mahdi Jalili, Ali Salehzadeh‐Yazdi, Yazdan Asgari, Seyed Shahriar Arab, Marjan Yaghmaie, Ardeshir Ghavamzadeh, Kamran Alimoghaddam
Software Mentions: 6
Published: about 9 years ago
10.1111/tgis.12456
Compactly representing massive terrain models as TINs in CityGMLCited by: 9
Author(s): Kavisha Kumar, Hugo Ledoux, J.E. Stoter
Software Mentions: 4
Published: about 6 years ago
10.3389/fninf.2014.00074
Cyberinfrastructure for the digital brain: spatial standards for integrating rodent brain atlasesCited by: 15
Author(s): Ilya Zaslavsky, Richard Baldock, Jyl Boline
Software Mentions: 3
Published: about 10 years ago
10.1186/1752-0509-6-139
VANTED v2: a framework for systems biology applicationsCited by: 140
Author(s): Hendrik Rohn, Astrid Junker, Anja Hartmann, Eva Grafahrend-Belau, Hendrik Treutler, Matthias Klapperstück, Tobias Czauderna, Christian Klukas, Falk Schreiber
Software Mentions: 2
Published: almost 13 years ago
10.1186/1471-2105-7-109
VANTED: A system for advanced data analysis and visualization in the context of biological networksCited by: 431
Author(s): Björn H. Junker, Christian Klukas, Falk Schreiber
Software Mentions: 2
Published: over 18 years ago
10.1371/journal.pone.0221620
A new grid- and modularity-based layout algorithm for complex biological networksCited by: 4
Author(s): Sheng He, Yijun Liu, Feiyue Ye, Renpu Li, Dai Ren-jun
Software Mentions: 2
Published: about 5 years ago
10.1186/1471-2105-9-S5-S1
Ontology Design Patterns for bio-ontologies: a case study on the Cell Cycle OntologyCited by: 67
Author(s): Mikel Egaña Aranguren, Erick Antezana, Martin Kuiper, Robert Stevens
Software Mentions: 2
Published: over 16 years ago
10.1186/1476-072X-8-3
Towards Web-based representation and processing of health informationCited by: 31
Author(s): Sheng Gao, Darka Mioc, Xiaolun Yi, François Anton, Eddie Oldfield, David Coleman
Software Mentions: 1
Published: almost 16 years ago
10.1186/1471-2105-10-19
BFL: a node and edge betweenness based fast layout algorithm for large scale networksCited by: 11
Author(s): Tatsunori Hashimoto, Masao Nagasaki, Kazuyuki Kojima, Satoru Miyano
Software Mentions: 1
Published: almost 16 years ago
10.1515/jib-2019-0026
Mental-Map Preserving Visualisation of Partitioned Networks in VantedCited by: 2
Author(s): Dimitar Garkov, Karsten Klein, Christian Klukas, Falk Schreiber
Software Mentions: 1
Published: over 5 years ago
10.1186/1471-213X-9-33
myGRN: a database and visualisation system for the storage and analysis of developmental genetic regulatory networksCited by: 3
Author(s): Jamil Bacha, James Brodie, Matthew Loose
Software Mentions: 1
Published: over 15 years ago
10.1371/journal.pone.0061255
Enterococcus faecalis Inhibits Superantigen Toxic Shock Syndrome Toxin-1-Induced Interleukin-8 from Human Vaginal Epithelial Cells through Tetramic AcidsCited by: 11
Author(s): Amanda J. Brosnahan, Joseph A. Merriman, Wilmara Salgado-Pabón, Bradley Ford, Patrick M. Schlievert
Software Mentions: 1
Published: over 11 years ago
10.3390/s91210097
Registration Combining Wide and Narrow Baseline Feature Tracking Techniques for Markerless AR SystemsCited by: 11
Author(s): Liya Duan, Tao Guan, Bo Yang
Software Mentions: 1
Published: almost 15 years ago
10.3390/s17050969
Bayesian Device-Free Localization and Tracking in a Binary RF Sensor NetworkCited by: 17
Author(s): Zhenghuan Wang, Heng Liu, Shengxin Xu, Xiangyuan Bu, Jianping An
Software Mentions: 1
Published: over 7 years ago
10.1063/4.0000060
Selecting XFEL single-particle snapshots by geometric machine learningCited by: 7
Author(s): Eduardo R. Cruz-Chú, Ahmad Hosseinizadeh, Ghoncheh Mashayekhi, Russell Fung, A. Ourmazd, Peter Schwander
Software Mentions: 1
Published: almost 4 years ago
10.16910/jemr.10.3.2
Eye-tracking Analysis of Interactive 3D GeovisualizationCited by: 16
Author(s): Lukáš Heřman, S Popelka, Vendula Hejlová
Software Mentions: 1
Published: over 7 years ago
10.1155/2019/7310175
Comparison of Overall Fit of Milled and Laser-Sintered CAD/CAM Crown CopingsCited by: 4
Author(s): Lucie Zuskova, Noor Al Mortadi, Robert J. Williams, Karem H. Alzoubi, Omar F. Khabour
Software Mentions: 1
Published: over 5 years ago