pypi: tmod | Projects | Ecosyste.ms: Papers

10.3390/metabo9100200

The metaRbolomics Toolbox in Bioconductor and beyond
Cited by: 61
Author(s): Jan Stanstrup, Corey D. Broeckling, Rick Helmus, Nils Hoffmann, Ewy A. Mathé, Thomas Naake, Luca Nicolotti, Kristian Peters, Johannes Michael Rainer, Reza M. Salek, Tobias Schulze, Emma L. Schymanski, Michael A. Stravs, Etienne Thévenot, Hendrik Treutler, Ralf Weber, Egon Willighagen, Michael Witting, Steffen Neumann
Software Mentions: 92
Published: about 5 years ago

10.1111/jcmm.16773

Peripheral blood transcriptome heterogeneity and prognostic potential in lung cancer revealed by RNA‐Seq
Cited by: 3
Author(s): Qi Zhang, Manchao Kuang, Haiyin An, Yajing Zhang, Kai Zhang, Feng Li, Lei Zhang, Shujun Cheng
Software Mentions: 11
Published: over 3 years ago

10.1186/s12859-020-03866-y

Increased biological relevance of transcriptome analyses in human skeletal muscle using a model-specific pipeline
Cited by: 7
Author(s): Yusuf Khan, Daniel Hammarström, Bent R. Rønnestad, Stian Ellefsen, Rafi Ahmad
Software Mentions: 10
Published: almost 4 years ago

10.3389/fimmu.2020.596173

The Peripheral Blood Transcriptome Is Correlated With PET Measures of Lung Inflammation During Successful Tuberculosis Treatment
Cited by: 4
Author(s): Trust Odia, Stephanus T. Malherbe, Stuart Meier, Elizna Maasdorp, Léanie Kleynhans, Nelita du Plessis, André G. Loxton, Daniel E. Zak, Ethan Thompson, Fergal J. Duffy, Helena Kuivaniemi, Katharina Ronacher, Jill Winter, Gerhard Walzl, Gerard Tromp
Software Mentions: 8
Published: almost 4 years ago

10.3389/fimmu.2021.694680

Gene Set Enrichment Analysis Reveals Individual Variability in Host Responses in Tuberculosis Patients
Cited by: 5
Author(s): Teresa Domaszewska, Joanna Żyła, Raik Otto, Stefan H. E. Kaufmann, January Weiner
Software Mentions: 7
Published: over 3 years ago

10.1172/jci.insight.130090

Cytomegalovirus infection is a risk factor for tuberculosis disease in infants
Cited by: 38
Author(s): Julius Müller, Rachel Tanner, Magali Matsumiya, Margaret Ann Snowden, Bernard Landry, Iman Satti, Stephanie A. Harris, Matthew K. O’Shea, Lisa Stockdale, Leanne Marsay, Agnieszka Chomka, Rachel Harrington-Kandt, Zita‐Rose Manjaly Thomas, Vivek Naranbhai, Elena Stylianou, Stanley Kimbung Mbandi, Mark Hatherill, Gregory Hussey, Hassan Mahomed, Michèle Tameris, J. Bruce McClain, Thomas G. Evans, Willem A. Hanekom, Thomas J. Scriba, Helen McShane, Helen A. Fletcher
Software Mentions: 6
Published: almost 5 years ago

10.1128/mBio.01193-19

Determination of an Interaction Network between an Extracellular Bacterial Pathogen and the Human Host
Cited by: 23
Author(s): Brad Griesenauer, Tuan M. Tran, Kate R. Fortney, Diane M. Janowicz, Paula A. Johnson, Hongyu Gao, Stephen Barnes, Landon Wilson, Yunlong Liu, Stanley M. Spinola
Software Mentions: 5
Published: over 5 years ago

10.3390/cells8080919

The Combination of IFN β and TNF Induces an Antiviral and Immunoregulatory Program via Non-Canonical Pathways Involving STAT2 and IRF9
Cited by: 11
Author(s): Mélissa K. Mariani, Pouria Dasmeh, Audray Fortin, Élise Caron, Mario Kalamujic, Alexander N. Harrison, Diana Ioana Hotea, Dacquin M. Kasumba, Sandra Cervantes-Ortiz, Espérance Mukawera, Adrian W.R. Serohijos, Nathalie Grandvaux
Software Mentions: 5
Published: over 5 years ago

10.3389/fimmu.2020.584116

Rheumatoid Arthritis Synovial Fluid Neutrophils Drive Inflammation Through Production of Chemokines, Reactive Oxygen Species, and Neutrophil Extracellular Traps
Cited by: 62
Author(s): Helen L. Wright, Max Lyon, Elinor A Chapman, Robert J. Moots, Steven W. Edwards
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-020-73942-z

Blood RNA signatures predict recent tuberculosis exposure in mice, macaques and humans
Cited by: 2
Author(s): Russell Ault, Colwyn A Headley, Alexander E. Hare, Bridget Carruthers, Asunción Mejías, Joanne Turner
Software Mentions: 4
Published: about 4 years ago

10.3389/fnins.2018.00742

Transcriptomic Characterization of the Human Habenula Highlights Drug Metabolism and the Neuroimmune System
Cited by: 22
Author(s): Bernard Le Foll, Leon French
Software Mentions: 3
Published: about 6 years ago

10.3389/fnana.2019.00094

Transcriptomic Characterization of the Human Insular Cortex and Claustrum
Cited by: 8
Author(s): Christine Ibrahim, Bernard Le Foll, Leon French
Software Mentions: 3
Published: almost 5 years ago

10.1038/srep43478

The influence of haemoglobin and iron on in vitro mycobacterial growth inhibition assays
Cited by: 29
Author(s): Rachel Tanner, Matthew K. O’Shea, Andrew Dickson White, Julius Müller, Rachel Harrington-Kandt, Magali Matsumiya, Mike Dennis, Eneida Abreu Parizotto, Stephanie A. Harris, Elena Stylianou, Vivek Naranbhai, Paulo Bettencourt, Hal Drakesmith, Sally Sharpe, Helen A. Fletcher, Helen McShane
Software Mentions: 3
Published: over 7 years ago

10.1038/s41598-019-47350-x

The Henna pigment Lawsone activates the Aryl Hydrocarbon Receptor and impacts skin homeostasis
Cited by: 17
Author(s): Laura Lozza, Pedro Moura-Alves, Teresa Domaszewska, Carolina Lage Crespo, Ioana Streață, Annika Kreuchwig, Andreas Puyskens, Marina Bechtle, Marion Klemm, Ulrike Zedler, Bogdan Silviu Ungureanu, Ute Guhlich-Bornhof, Anne-Britta Koehler, Manuela Stäber, Hans-Joachim Mollenkopf, Robert Hurwitz, Jens Furkert, Gerd Krause, January Weiner, António Jacinto, Mihai Ioana, Maria Leite‐de‐Moraes, Frank Siebenhaar, Marcus Maurer, Stefan H. E. Kaufmann
Software Mentions: 3
Published: over 5 years ago

10.1038/s41598-019-56994-8

Characterization of potential biomarkers of reactogenicity of licensed antiviral vaccines: randomized controlled clinical trials conducted by the BIOVACSAFE consortium
Cited by: 19
Author(s): January Weiner, David Lewis, Jeroen Maertzdorf, Hans-Joachim Mollenkopf, Caroline L. Bodinham, Kat Pizzoferro, Catherine Linley, Aldona Greenwood, Alberto Mantovani, Barbara Bottazzi, Philippe Denoël, Geert Leroux‐Roels, Kent E. Kester, Ingileif Jónsdóttir, Robert A. van den Berg, Stefan H. E. Kaufmann, Giuseppe Del Giudice
Software Mentions: 3
Published: almost 5 years ago

10.1128/CVI.00439-16

Safety and Immunogenicity of the Recombinant Mycobacterium bovis BCG Vaccine VPM1002 in HIV-Unexposed Newborn Infants in South Africa
Cited by: 106
Author(s): André G. Loxton, Julia K. Knaul, Leander Grode, Andrea Gutschmidt, Christiane Meller, B. Eisele, Hilary Johnstone, Gian D. van der Spuy, Jeroen Maertzdorf, Stefan H. E. Kaufmann, Anneke C. Hesseling, Gerhard Walzl, Mark F. Cotton
Software Mentions: 2
Published: almost 8 years ago

10.1371/journal.pgen.1004166

DAAM Is Required for Thin Filament Formation and Sarcomerogenesis during Muscle Development in Drosophila
Cited by: 35
Author(s): Imre Molnár, Ede Migh, Szilárd Szikora, Tibor Kalmár, Attila Gergely Végh, F. Deák, Szilvia Barkó, Beáta Bugyi, Zacharias Orfanos, János Kovács, Gábor Juhász, György Váró, Miklós Nyitrai, John C. Sparrow, József Mihály
Software Mentions: 2
Published: over 10 years ago

10.3389/fimmu.2017.01563

Molecular Signatures of Immunity and Immunogenicity in Infection and Vaccination
Cited by: 16
Author(s): Mariëlle C. Haks, Barbara Bottazzi, Valentina Cecchinato, Corinne De Gregorio, Giuseppe Del Giudice, Stefan H. E. Kaufmann, Antonio Lanzavecchia, David Lewis, Jeroen Maertzdorf, Alberto Mantovani, Federica Sallusto, Marina Sironi, Mariagrazia Uguccioni, Tom H. M. Ottenhoff
Software Mentions: 2
Published: about 7 years ago

Ecosyste.ms: Papers

Projects: pypi: tmod

Papers Mentioning tmod 18