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pypi projects 9,932

pypi: ARS
Physically-accurate robotics simulator
Papers that mentioned: 37
Very Likely Science (80)
pypi: neuralnet
A high-level library on top of Theano.
Papers that mentioned: 37
Very Likely Science (85)
pypi: demux
Application for demultiplexing sequence data
Papers that mentioned: 37
Very Likely Science (65)
pypi: amap
Automated mouse atlas propagation
Papers that mentioned: 37
Very Likely Science (80)
pypi: heatmapper
Python library for creating heatmap
Papers that mentioned: 37
Very Likely Science (65)
pypi: sed
Streaming editor toolkit
Papers that mentioned: 36
Very Likely Science (65)
pypi: s
The almighty S-package
Papers that mentioned: 36
Very Likely Science (65)
pypi: gff3
Manipulate genomic features and validate the syntax and reference sequence of your GFF3 files.
Papers that mentioned: 36
Very Likely Science (85)
pypi: annotate
Decorator to set a function's __annotations__ like Py3.
Papers that mentioned: 36
Very Likely Science (65)
pypi: PyQt5
Python bindings for the Qt cross platform application toolkit
Papers that mentioned: 36
Very Likely Science (65)
pypi: nltk
Natural Language Toolkit
Papers that mentioned: 36
Very Likely Science (70)
pypi: nose
nose extends unittest to make testing easier
Papers that mentioned: 36
Very Likely Science (65)
pypi: minet
A webmining CLI tool & library for python.
Papers that mentioned: 36
Very Likely Science (100)
pypi: Minerva
Robust Comet server and client built on Twisted and Closure Library
Papers that mentioned: 36
Very Likely Science (65)
pypi: NEB
Namespace package for NEB projects.
Papers that mentioned: 36
Very Likely Science (80)
pypi: fastcluster
Fast hierarchical clustering routines for R and Python.
Papers that mentioned: 36
Very Likely Science (80)
pypi: salmon
A simple metric collector with alerts.
Papers that mentioned: 36
Very Likely Science (90)
pypi: visualizer
Automate the process of visualization
Papers that mentioned: 36
Very Likely Science (75)
pypi: optim
Playground for optimizers.
Papers that mentioned: 36
Very Likely Science (65)
pypi: dPCA
Implements Demixed Principal Components Analysis
Papers that mentioned: 36
Very Likely Science (100)
pypi: tseries
A package for analyzing time series with scikit-learn
Papers that mentioned: 36
Very Likely Science (65)
pypi: RO
Collection of utilities including general algorithms, astronomical transformations and Tkinter widgets
Papers that mentioned: 36
Very Likely Science (75)
pypi: genome
Papers that mentioned: 36
Very Likely Science (65)
pypi: splits
A library for dealing with splittable files
Papers that mentioned: 36
Very Likely Science (80)
pypi: sandwich
sudo make_me_a_sandwich.
Papers that mentioned: 35
Very Likely Science (65)
pypi: propy
Library of class property creation functions for type conversion and validation.
Papers that mentioned: 35
Likely Science (40)
pypi: HARP
Papers that mentioned: 35
Very Likely Science (65)
pypi: READemption
A RNA-Seq Analysis Pipeline
Papers that mentioned: 35
Very Likely Science (90)
pypi: utils
A grab-bag of utility functions and objects
Papers that mentioned: 35
Very Likely Science (60)
pypi: MultiPoint
WLC Structure Factor
Papers that mentioned: 35
Very Likely Science (100)
pypi: run
Python Process Run Control
Papers that mentioned: 35
Very Likely Science (65)
pypi: hyperopt
Distributed Asynchronous Hyperparameter Optimization
Papers that mentioned: 34
Very Likely Science (100)
pypi: NMODL
NEURON Modeling Language Source-to-Source Compiler Framework
Papers that mentioned: 34
Very Likely Science (75)
pypi: ca
Papers that mentioned: 34
Very Likely Science (65)
pypi: fields
Container class boilerplate killer.
Papers that mentioned: 34
Likely Science (40)
pypi: vg
Linear algebra for humans: a very good vector-geometry and linear-algebra toolbelt
Papers that mentioned: 34
Very Likely Science (80)
pypi: predictor
Serve up scikit-learn models for prediction
Papers that mentioned: 34
Very Likely Science (65)
pypi: analyst
Data analysis toolkit
Papers that mentioned: 34
Very Likely Science (90)
pypi: liftover
Package for converting between genome build coordinates
Papers that mentioned: 34
Very Likely Science (80)
pypi: Medea
JSON Object Mapper / Encoder
Papers that mentioned: 34
Very Likely Science (65)
pypi: qcat
Qcat is Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files
Papers that mentioned: 34
Very Likely Science (65)
pypi: class
A simple class!
Papers that mentioned: 34
Very Likely Science (65)
pypi: pyFAI
Python implementation of fast azimuthal integration
Papers that mentioned: 34
Very Likely Science (100)
pypi: scmap
Assigns rgb colors to points on sphere.
Papers that mentioned: 34
Very Likely Science (65)
pypi: zt
util
Papers that mentioned: 34
Very Likely Science (65)
pypi: CellNet
Papers that mentioned: 33
Very Likely Science (65)
pypi: diversitree
:palm_tree: Choose the most diverse possible set of strains from a phylogenetic tree
Papers that mentioned: 33
Very Likely Science (80)
pypi: R4
R4 is a python package for encrypt your important data
Papers that mentioned: 33
Very Likely Science (65)
pypi: TPOT
Tree-based Pipeline Optimization Tool
Papers that mentioned: 33
Very Likely Science (100)
pypi: miner
UNKNOWN
Papers that mentioned: 33
Very Likely Science (65)
pypi: eclipse
A simplified and extended version of OpenAI's Contrastive Language-Image Pretraining
Papers that mentioned: 33
Very Likely Science (65)
pypi: cell
Kombu actor framework
Papers that mentioned: 33
Very Likely Science (80)
pypi: config
A hierarchical, easy-to-use, powerful configuration module for Python
Papers that mentioned: 33
Very Likely Science (65)
pypi: diff
"You diff objects, you find out why they ain't the same."
Papers that mentioned: 33
Very Likely Science (65)
pypi: data
Work with unicode/non-unicode data from files or strings uniformly.
Papers that mentioned: 33
Very Likely Science (65)
pypi: HiCExplorer
Set of programs to process, analyze and visualize Hi-C data
Papers that mentioned: 33
Very Likely Science (80)
pypi: jellyfish
Approximate and phonetic matching of strings.
Papers that mentioned: 33
Very Likely Science (65)
pypi: PPA
Python Publishing Accessories (PPA) is a library of python modules useful to build web publication systems
Papers that mentioned: 33
Very Likely Science (65)
pypi: modeller
create efficent models starting from json schema
Papers that mentioned: 33
Very Likely Science (65)
pypi: Record
Special Record objects used in Zope.
Papers that mentioned: 33
Very Likely Science (80)
pypi: LFPy
A module for modeling extracellular potentials of multicompartment neuron models built on NEURON
Papers that mentioned: 33
Very Likely Science (90)
pypi: panther
Fast & Friendly, Web Framework For Building Async APIs
Papers that mentioned: 33
Very Likely Science (65)
pypi: forcats
Tools for working with pandas categoricals
Papers that mentioned: 33
Very Likely Science (65)
pypi: toolkit
toolkit for script and utils
Papers that mentioned: 33
Very Likely Science (65)
pypi: dlib
A toolkit for making real world machine learning and data analysis applications
Papers that mentioned: 33
Very Likely Science (100)
pypi: PIPS
Python Interior Point Solver
Papers that mentioned: 32
Very Likely Science (65)
pypi: 8
For future projects.
Papers that mentioned: 32
Very Likely Science (65)
pypi: ingenuity
Papers that mentioned: 32
Very Likely Science (65)
pypi: Cactus
Static site generation and deployment.
Papers that mentioned: 32
Very Likely Science (65)
pypi: acpype
ACPYPE - AnteChamber PYthon Parser interfacE
Papers that mentioned: 32
Very Likely Science (100)
pypi: jtools
A Python module that aids filtering, formatting, and transforming JSON-like objects
Papers that mentioned: 32
Very Likely Science (65)
pypi: ineq
Package to calculate and plot income distribution indexes
Papers that mentioned: 32
Very Likely Science (65)
pypi: autobuild
Linden Lab Automated Package Management and Build System
Papers that mentioned: 32
Very Likely Science (65)
pypi: detection
A motion detector
Papers that mentioned: 32
Very Likely Science (65)
pypi: graphviz
Simple Python interface for Graphviz
Papers that mentioned: 32
Very Likely Science (100)
pypi: BATS
https://github.com/ContaTP/BATS-Bayesian-Adaptive-Trial-Simulator
Papers that mentioned: 32
Very Likely Science (100)
pypi: GroopM
Metagenomic binning suite
Papers that mentioned: 32
Very Likely Science (65)
pypi: xtable
operate table format in console. console table, csv, json, yaml and markdown.
Papers that mentioned: 32
Very Likely Science (65)
pypi: scanner
Scanner is like Ruby's StringScanner
Papers that mentioned: 32
Very Likely Science (65)
pypi: Optimus
Optimus is a static site builder using Jinja2, webassets and Babel.
Papers that mentioned: 32
Very Likely Science (65)
pypi: funannotate
funannotate: eukaryotic genome annotation pipeline
Papers that mentioned: 32
Very Likely Science (100)
pypi: galaxy
Galaxy (http://galaxyproject.org/).
Papers that mentioned: 32
Very Likely Science (80)
pypi: Mantid
A simple, multi-project issue tracker.
Papers that mentioned: 32
Very Likely Science (65)
pypi: Tachyon
Fast Sum Product Network Library
Papers that mentioned: 32
Very Likely Science (75)
pypi: fsl
Specification language for selecting files from directory tree
Papers that mentioned: 32
Very Likely Science (65)
pypi: AST
Conversion between protobuf3 and srcML.
Papers that mentioned: 32
Very Likely Science (65)
pypi: treeio
A pure python parser for tree data format IO
Papers that mentioned: 32
Very Likely Science (65)
pypi: tnet
Torch and torchnet like library for building and training neural networks in Theano
Papers that mentioned: 32
Very Likely Science (75)
pypi: HAL
Powerful AI Framework
Papers that mentioned: 32
Very Likely Science (80)
pypi: sem
A Simulation Execution Manager for ns-3
Papers that mentioned: 32
Very Likely Science (100)
pypi: opm
OPM-Common Python bindings
Papers that mentioned: 32
Very Likely Science (65)
pypi: MCP
A program to orchestrate Entellect Challenge bot matches.
Papers that mentioned: 32
Very Likely Science (65)
pypi: JIT
This is a package for my just in time
Papers that mentioned: 32
Very Likely Science (65)
pypi: BDS
Papers that mentioned: 31
Very Likely Science (65)
pypi: b
ccccccccccc
Papers that mentioned: 31
Very Likely Science (65)
pypi: design
Generates various common web design elements. Borders, patterns, textures, gradients, etc.
Papers that mentioned: 31
Likely Science (55)
pypi: Extract
Extraction tool for model and observed data intercomparison
Papers that mentioned: 31
Very Likely Science (80)
pypi: mfp
my first package
Papers that mentioned: 31
Very Likely Science (65)
pypi: mpi4py
Python bindings for MPI
Papers that mentioned: 31
Very Likely Science (100)
pypi: Vertex
Divmod Vertex is the first implementation of the Q2Q protocol, which is a peer-to-peer communication protocol for establishing stream-based communication between named endpoints.
Papers that mentioned: 31
Very Likely Science (100)