pypi: diff | Projects | Ecosyste.ms: Papers

10.1186/s12859-021-04054-2

CytoTree: an R/Bioconductor package for analysis and visualization of flow and mass cytometry data
Cited by: 13
Author(s): Yuting Dai, Aining Xu, Jianfeng Li, Liang Wu, Shanhe Yu, Jun Chen, Wei‐Li Zhao, Xiao Jian Sun, Jinyan Huang
Software Mentions: 17
Published: almost 4 years ago

10.1155/2014/910390

<i>biomvRhsmm:</i>Genomic Segmentation with Hidden Semi-Markov Model
Cited by: 4
Author(s): Yang Du, Eduard Muráni, Siriluck Ponsuksili, Klaus Wimmers
Software Mentions: 10
Published: almost 11 years ago

10.1111/mec.15648

Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species
Cited by: 11
Author(s): Christian Rellstab, Stefan Zoller, Christian Sailer, Andrew Tedder, Félix Gugerli, Kentaro Shimizu, Rolf Holderegger, Alex Widmer, Martin C. Fischer
Software Mentions: 9
Published: about 4 years ago

10.3389/fninf.2018.00016

Experimental Directory Structure (Exdir): An Alternative to HDF5 Without Introducing a New File Format
Cited by: 14
Author(s): Svenn-Arne Dragly, Milad Hobbi Mobarhan, Mikkel Elle Lepperød, Simen Tennøe, Marianne Fyhn, Torkel Hafting, Anders Malthe‐Sørenssen
Software Mentions: 7
Published: over 6 years ago

10.1093/gigascience/giy125

A benchmark study of k-mer counting methods for high-throughput sequencing
Cited by: 43
Author(s): Swati Manekar, S. R. Sathe
Software Mentions: 4
Published: about 6 years ago

10.7717/peerj.2681

RGFA: powerful and convenient handling of assembly graphs
Cited by: 5
Author(s): Giorgio Gonnella, Stefan Kurtz
Software Mentions: 4
Published: about 8 years ago

10.1002/ece3.6001

RAPTURE (RAD capture) panel facilitates analyses characterizing sea lamprey reproductive ecology and movement dynamics
Cited by: 27
Author(s): Nicholas M. Sard, Seth Smith, Jared J. Homola, Jeannette Kanefsky, Gale A. Bravener, Jean V. Adams, Christopher M. Holbrook, Peter J. Hrodey, Kevin Tallon, Kim T. Scribner
Software Mentions: 4
Published: almost 5 years ago

10.1371/journal.ppat.1009272

Nucleosome landscape reflects phenotypic differences in Trypanosoma cruzi life forms
Cited by: 10
Author(s): Alex Ranieri Jerônimo Lima, Christiane B. de Araujo, Saloê Bispo, José Salvatore Leister Patané, Ariel Mariano Silber, Maria Carolina Elias, Júlia Pinheiro Chagas da Cunha
Software Mentions: 4
Published: almost 4 years ago

10.1002/path.4886

Molecular classification of urothelial carcinoma: global mRNA classification versus tumour-cell phenotype classification
Cited by: 245
Author(s): Gottfrid Sjödahl, Pontus Eriksson, Fredrik Liedberg, Mattias Höglund
Software Mentions: 4
Published: almost 8 years ago

10.1093/database/bav094

Sample data processing in an additive and reproducible taxonomic workflow by using character data persistently linked to preserved individual specimens
Cited by: 20
Author(s): Norbert Kilian, Tilo Henning, Patrick Plitzner, Andreas Müller, Anton Güntsch, Ben C Stöver, Kai Müller, Walter G. Berendsohn, Thomas Borsch
Software Mentions: 3
Published: almost 10 years ago

10.1186/s12859-018-2014-8

Introducing difference recurrence relations for faster semi-global alignment of long sequences
Cited by: 69
Author(s): Hajime Suzuki, Masahiro Kasahara
Software Mentions: 3
Published: almost 7 years ago

10.1186/s12918-014-0115-1

A computational platform to maintain and migrate manual functional annotations for BioCyc databases
Cited by: 4
Author(s): Jesse R. Walsh, Taner Z. Sen, Julie A. Dickerson
Software Mentions: 3
Published: about 10 years ago

10.3390/s21124054

HyAdamC: A New Adam-Based Hybrid Optimization Algorithm for Convolution Neural Networks
Cited by: 17
Author(s): Kyung Soo Kim, Yong-Suk Choi
Software Mentions: 3
Published: over 3 years ago

10.1186/s40163-021-00156-7

The impact of strict measures as a result of the COVID-19 pandemic on the spatial pattern of the demand for police: case study Antwerp (Belgium)
Cited by: 4
Author(s): Maite Dewinter, Christophe Vandeviver, Philipp M. Dau, Tom Vander Beken, Frank Witlox
Software Mentions: 2
Published: about 3 years ago

10.3390/e22060600

Distributed Steganography in PDF Files—Secrets Hidden in Modified Pages
Cited by: 7
Author(s): Katarzyna Koptyra, Marek R. Ogiela
Software Mentions: 2
Published: over 4 years ago

10.7717/peerj-cs.372

Software evolution: the lifetime of fine-grained elements
Cited by: 1
Author(s): Diomidis Spinellis, Πάνος Λουρίδας, Maria Kechagia
Software Mentions: 2
Published: almost 4 years ago

10.1186/s12859-021-04263-9

Computational comparison of common event-based differential splicing tools: practical considerations for laboratory researchers
Cited by: 10
Author(s): Ittai B. Muller, Stijn Meijers, Peter Kampstra, Steven van Dijk, Michel van Elswijk, Marry Lin, Anna Wojtuszkiewicz, Gerrit Jansen, Robert de Jonge, Jacqueline Cloos
Software Mentions: 2
Published: over 3 years ago

10.1002/advs.202004635

The Dual Function of KDM5C in Both Gene Transcriptional Activation and Repression Promotes Breast Cancer Cell Growth and Tumorigenesis
Cited by: 23
Author(s): Hai‐feng Shen, Wen‐juan Zhang, Ying Huang, Yaohui He, Guo-Sheng Hu, Lei Wang, Bing‐ling Peng, Yi Jia, Ting‐ting Li, Rui Rong, Xiao‐yan Chen, Jun‐yi Liu, Wenjuan Li, Kenny Ohgi, Shaowei Li, Michael G. Rosenfeld, Wen Li
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0050769

Using RosettaLigand for Small Molecule Docking into Comparative Models
Cited by: 38
Author(s): Kristian Kaufmann, Jens Meiler
Software Mentions: 2
Published: about 12 years ago

10.5808/GI.2020.18.2.e24

An empirical evaluation of electronic annotation tools for Twitter data
Cited by: 0
Author(s): Davy Weissenbacher, Karen OʼConnor, Aiko T. Hiraki, Jin-Dong Kim, Graciela Gonzalez-Hernandez
Software Mentions: 1
Published: over 4 years ago

10.3390/jcm10173990

Does Health Literacy Reinforce Disease Knowledge Gain? A Prospective Observational Study of Hungarian COPD Patients
Cited by: 3
Author(s): Orsolya Papp-Zipernovszky, Márta Csabai, Peter Schulz, János Varga
Software Mentions: 1
Published: over 3 years ago

10.1186/s12919-016-0058-1

Comparison of 2 models for gene–environment interactions: an example of simulated gene–medication interactions on systolic blood pressure in family-based data
Cited by: 3
Author(s): Lindsay Fernández-Rhodes, Chani J. Hodonsky, Mariaelisa Graff, Shelly Ann Love, Annie Green Howard, Amanda A. Seyerle, Christy L. Avery, Geetha Chittoor, Nora Franceschini, V. Saroja Voruganti, Kristin L. Young, Jeffrey R. O’Connell, Kari E. North, Anne E. Justice
Software Mentions: 1
Published: about 8 years ago

10.3390/s19183890

Monitoring the Snowpack Volume in a Sinkhole on Mount Lebanon using Time Lapse Photogrammetry
Cited by: 9
Author(s): Charbel Abou Chakra, Simon Gascoin, Janine Somma, Pascal Fanise, Laurent Drapeau
Software Mentions: 1
Published: over 5 years ago

10.3390/s20236735

Coarse-to-Fine Satellite Images Change Detection Framework via Boundary-Aware Attentive Network
Cited by: 14
Author(s): Yi Zhang, Shizhou Zhang, Ying Li, Yanning Zhang
Software Mentions: 1
Published: about 4 years ago

10.3390/s21010011

Localization of Scattering Objects Using Neural Networks
Cited by: 2
Author(s): Domonkos Haffner, Ferenc Izsák
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms21010243

Imaging Inflammation and Infection in the Gastrointestinal Tract
Cited by: 16
Author(s): Alex N. Frickenstein, Meredith Jones, Bahareh Behkam, Lacey R. McNally
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.pone.0091929

PASTEC: An Automatic Transposable Element Classification Tool
Cited by: 237
Author(s): Claire Hoede, Sandie Arnoux, Mark Moisset, Timothée Chaumier, Olivier Inizan, Véronique Jamilloux, Hadi Quesneville
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0109802

Visuospatial Tasks Affect Locomotor Control More than Nonspatial Tasks in Older People
Cited by: 36
Author(s): Jasmine C. Menant, Daina L. Sturnieks, Matthew A. Brodie, Susan L. Smith, Stephen R. Lord
Software Mentions: 1
Published: about 10 years ago

10.1371/journal.pntd.0002134

Arginase Activity - A Marker of Disease Status in Patients with Visceral Leishmaniasis in Ethiopia
Cited by: 48
Author(s): Tamrat Abebe, Yegnasew Takele, Teklu Weldegebreal, Tom Cloke, Ellen I. Closs, Camille Corset, Asrat Hailu, Workagegnehu Hailu, Sisay Yifru, Karina Corware, Margaux Corset, Manuel Modolell, Markus Munder, Fabienne Tacchini‐Cottier, Ingrid Müller, Pascale Kropf
Software Mentions: 1
Published: almost 12 years ago

10.3390/e23060641

Neural Estimator of Information for Time-Series Data with Dependency
Cited by: 4
Author(s): Sina Molavipour, Hamid Ghourchian, Germán Bassi, Mikael Skoglund
Software Mentions: 1
Published: over 3 years ago

10.1371/journal.pbio.1000543

Phenotypic Consequences of Copy Number Variation: Insights from Smith-Magenis and Potocki-Lupski Syndrome Mouse Models
Cited by: 131
Author(s): Guénola Ricard, Jéssica Molina, Jacqueline Chrast, Wenli Gu, Nele Gheldof, Sylvain Pradervand, Frédéric Schütz, Juan I. Young, James R. Lupski, Alexandre Reymond, Katherina Walz
Software Mentions: 1
Published: about 14 years ago

10.3389/fonc.2021.554205

A Fast Protocol for Multiparametric Characterisation of Diffusion in the Brain and Brain Tumours
Cited by: 1
Author(s): Ricardo Loução, Ana-Maria Oros-Peusquens, Karl‐Josef Langen, Hugo Alexandre Ferreira, N. Jon Shah
Software Mentions: 1
Published: over 3 years ago

10.1155/2011/345012

<i>Clostridium difficile</i>Infection and Proton Pump Inhibitor Use in Hospitalized Pediatric Cystic Fibrosis Patients
Cited by: 14
Author(s): John F. Pohl, Raza Patel, Jeffery T. Zobell, Ellen Lin, E. Kent Korgenski, Kody Crowell, M. F. Mackay, Aleesha Richman, C.L. Larsen, Barbara A. Chatfield
Software Mentions: 1
Published: almost 14 years ago

Ecosyste.ms: Papers

Projects: pypi: diff

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