Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12859-021-04054-2
https://doi.org/10.1186/s12859-021-04054-2
CytoTree: an R/Bioconductor package for analysis and visualization of flow and mass cytometry data
Cited by: 13
Author(s): Yuting Dai, Aining Xu, Jianfeng Li, Liang Wu, Shanhe Yu, Jun Chen, Wei‐Li Zhao, Xiao Jian Sun, Jinyan Huang
Published: over 3 years ago
Software Mentions 17
bioconductor: CytoTree
Papers that mentioned: 1bioconductor: diffcyt
Differential discovery in high-dimensional cytometry via high-resolution clusteringPapers that mentioned: 18
bioconductor: flowCore
flowCore: Basic structures for flow cytometry dataPapers that mentioned: 109
bioconductor: FlowSOM
Using self-organizing maps for visualization and interpretation of cytometry dataPapers that mentioned: 177
bioconductor: MetaCyto
MetaCyto: A package for meta-analysis of cytometry dataPapers that mentioned: 3
bioconductor: scmap
A tool for unsupervised projection of single cell RNA-seq dataPapers that mentioned: 34
pypi: FlowIO
FlowIO is a Python library for reading / writing Flow Cytometry Standard (FCS) filesPapers that mentioned: 1
pypi: PhenoGraph
Graph-based clustering for high-dimensional single-cell dataPapers that mentioned: 96