Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: fsl

https://packages.ecosyste.ms/registries/pypi.org/packages/fsl

Specification language for selecting files from directory tree
2 versions
Latest release: about 1 year ago

Papers Mentioning fsl 32

10.12688/f1000research.14361.1
freesurfer: Connecting the Freesurfer software with R
Cited by: 7
Author(s): John Muschelli, Elizabeth Sweeney, Ciprian M. Crainiceanu
Software Mentions: 8
Published: over 6 years ago
10.3389/fninf.2016.00036
A Multi-facetted Visual Analytics Tool for Exploratory Analysis of Human Brain and Function Datasets
Cited by: 18
Author(s): Diego A. Angulo, Cyril Schneider, James H. Oliver, Nathalie Charpak, José Tiberio Hernández
Software Mentions: 8
Published: about 8 years ago
10.3389/fninf.2020.00013
Automated Hierarchy Evaluation System of Large Vessel Occlusion in Acute Ischemia Stroke
Cited by: 17
Author(s): Jia You, Arthur Tsang, Philip L. H. Yu, Eva L. H. Tsui, Pauline P. S. Woo, Carrie Siu Man Lui, Gilberto Ka-Kit Leung
Software Mentions: 6
Published: over 4 years ago
10.1088/0031-9155/61/15/5587
Quantitative T2 mapping of white matter: applications for ageing and cognitive decline
Cited by: 27
Author(s): Michael Knight, Bryony McCann, Demitra Tsivos, Serena Dillon, Elizabeth Coulthard, Risto A. Kauppinen
Software Mentions: 4
Published: over 8 years ago
10.1002/brb3.327
<scp>DTI</scp> and <scp>VBM</scp> reveal white matter changes without associated gray matter changes in patients with idiopathic restless legs syndrome
Cited by: 27
Author(s): Marcus Belke, Johannes T. Heverhagen, Boris Keil, Felix Rosenow, Wolfgang H. Oertel, Karin Stiasny‐Kolster, Susanne Knake, Katja Menzler
Software Mentions: 4
Published: over 9 years ago
10.1038/s41598-019-38894-z
The cingulum as a marker of individual differences in neurocognitive development
Cited by: 39
Author(s): Joe Bathelt, Amy Johnson, Mengya Zhang, Duncan E. Astle
Software Mentions: 3
Published: over 5 years ago
10.3389/fnins.2021.625816
The Protective Effects of Perceived Control During Repeated Exposure to Aversive Stimuli
Cited by: 7
Author(s): Kainan S. Wang, Mauricio R. Delgado
Software Mentions: 3
Published: almost 4 years ago
10.1038/tp.2016.283
White matter changes in microstructure associated with a maladaptive response to stress in rats
Cited by: 23
Author(s): Ricardo Magalhães, Julie Bourgin, Fawzi Boumezbeur, Paulo Marques, Michel Bottlaender, Cyril Poupon, Boucif Djemaï, Édouard Duchesnay, Sébastien Mériaux, Nuno Sousa, Thérèse M. Jay, Arnaud Cachia
Software Mentions: 3
Published: almost 8 years ago
10.3389/fnagi.2017.00318
Exercise Training Increases Parietal Lobe Cerebral Blood Flow in Chronic Stroke: An Observational Study
Cited by: 21
Author(s): Andrew D. Robertson, Susan Marzolini, Laura Middleton, Vincenzo S. Basile, Paul Oh, Bradley J. MacIntosh
Software Mentions: 3
Published: about 7 years ago
10.1111/j.1460-9568.2010.07443.x
Investigating object representations during change detection in human extrastriate cortex
Cited by: 7
Author(s): D. Samuel Schwarzkopf, Juha Silvanto, Sharon Gilaie-Dotan, Geraint Rees
Software Mentions: 3
Published: about 14 years ago
10.1016/j.pain.2012.11.018
The importance of context: When relative relief renders pain pleasant
Cited by: 138
Author(s): Siri Leknes, Chantal Berna, Michael C. Lee, Gregory D. Snyder, Guido Biele, Irene Tracey
Software Mentions: 3
Published: over 11 years ago
10.1523/JNEUROSCI.0870-20.2021
Viewing ambiguous social interactions increases functional connectivity between frontal and temporal nodes of the social brain
Cited by: 12
Author(s): Matthew Ainsworth, Jérôme Sallet, Olivier Joly, Diana Kyriazis, Nikolaus Kriegeskorte, John Duncan, Urs Schüffelgen, Matthew Rushworth, Andrew Bell
Software Mentions: 3
Published: over 3 years ago
10.1002/brb3.420
Intuitive decision making as a gradual process: investigating semantic intuition‐based and priming‐based decisions with <scp>fMRI</scp>
Cited by: 21
Author(s): Thea Zander, Ninja K. Horr, Annette Bolte, Kirsten G. Volz
Software Mentions: 2
Published: almost 9 years ago
10.1002/brb3.2093
Interactions between methodological and interindividual variability: How Monetary Incentive Delay (MID) task contrast maps vary and impact associations with behavior
Cited by: 5
Author(s): Michael I. Demidenko, Alexander Weigard, Karthikeyan Ganesan, Hyesue Jang, Andrew Jahn, Edward D. Huntley, Daniel P. Keating
Software Mentions: 2
Published: over 3 years ago
10.1371/journal.pone.0222796
Discerning the functional networks behind processing of music and speech through human vocalizations
Cited by: 12
Author(s): Arafat Angulo-Perkins, Luis Concha
Software Mentions: 2
Published: about 5 years ago
10.1371/journal.pone.0172923
Reliability of cortical lesion detection on double inversion recovery MRI applying the MAGNIMS-Criteria in multiple sclerosis patients within a 16-months period
Cited by: 14
Author(s): Tobias D Faizy, Christian J. Thaler, Tim Ceyrowski, Gabriel Broocks, Natascha Treffler, Jan Sedlacik, Klarissa Hanja Stürner, Jan‐Patrick Stellmann, Christoph Heesen, Jens Fiehler, Susanne Siemonsen
Software Mentions: 2
Published: over 7 years ago
10.1002/hbm.25286
Comparing machine and deep <scp>learning‐based</scp> algorithms for prediction of clinical improvement in psychosis with functional magnetic resonance imaging
Cited by: 19
Author(s): Jason Smucny, Ian Davidson, Cameron S. Carter
Software Mentions: 2
Published: almost 4 years ago
10.1126/sciadv.aau3460
A common neural signature of brain injury in concussion and subconcussion
Cited by: 67
Author(s): Adnan A. Hirad, Jeffrey J. Bazarian, Kian Merchant‐Borna, Frank E. Garcea, Sarah R. Heilbronner, David A. Paul, Eric B. Hintz, Edwin van Wijngaarden, Giovanni Schifitto, David W. Wright, Tamara R. Espinoza, Bradford Z. Mahon
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0003396
Colocalized Structural and Functional Changes in the Cortex of Patients with Trigeminal Neuropathic Pain
Cited by: 120
Author(s): Alexandre F. DaSilva, Lino Becerra, Gautam Pendse, Boris A. Chizh, Shannon Tully, David Borsook
Software Mentions: 1
Published: about 16 years ago
10.1371/journal.pone.0226816
Functional interactions in patients with hemianopia: A graph theory-based connectivity study of resting fMRI signal
Cited by: 9
Author(s): Caterina A. Pedersini, Joan Guàrdia‐Olmos, Marc Montalà-Flaquer, Nicolò Cardobi, Javier Sánchez-López, Giorgia Parisi, Silvia Savazzi, Carlo Alberto Marzi
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0106133
Functional Reorganization of the Default Mode Network across Chronic Pain Conditions
Cited by: 396
Author(s): Marwan N. Baliki, Ali Mansour, Alex T. Baria, A. Vania Apkarian
Software Mentions: 1
Published: about 10 years ago
10.3389/fneur.2021.637542
Simultaneous Assessment of Electroencephalography Microstates and Resting State Intrinsic Networks in Alzheimer's Disease and Healthy Aging
Cited by: 1
Author(s): Stefan J. Teipel, Katharina Brüggen, Anna G. M. Temp, Kristina Jakobi, Marc‐André Weber, Christoph Berger
Software Mentions: 1
Published: over 3 years ago
10.1371/journal.pone.0091400
Differential White Matter Connectivity in Early Mild Cognitive Impairment According to CSF Biomarkers
Cited by: 12
Author(s): Jae Sung Lim, Young Ho Park, Jae‐Won Jang, So Yong Park, SangYun Kim
Software Mentions: 1
Published: over 10 years ago
10.3389/fnins.2020.00325
Multimodal MRI Longitudinal Assessment of White and Gray Matter in Different SPG Types of Hereditary Spastic Paraparesis
Cited by: 6
Author(s): Domenico Montanaro, Marinela Vavla, Francesca Frijia, Gayanè Aghakhanyan, Alessandra Baratto, Alessio Coi, Cristina Stefan, Giulia Girardi, Gabriella Paparella, S De Cori, P. Totaro, Francesco Lombardo, Gianluca Piccoli, Andrea Martinuzzi
Software Mentions: 1
Published: over 4 years ago
10.1186/s11689-021-09391-0
Effects of sensory distraction and salience priming on emotion identification in autism: an fMRI study
Cited by: 1
Author(s): Geneviève Patterson, Kaitlin K. Cummings, Jiwon Jung, Nana J. Okada, Nim Tottenham, Susan Y. Bookheimer, Mirella Dapretto, Shulamite A. Green
Software Mentions: 1
Published: about 3 years ago
10.1007/s00429-019-02019-z
Human menstrual cycle variation in subcortical functional brain connectivity: a multimodal analysis approach
Cited by: 38
Author(s): Esmeralda Hidalgo-Lopez, Karsten Mueller, Ti Anni Harris, Markus Aichhorn, Julia Sacher, Belinda Pletzer
Software Mentions: 1
Published: almost 5 years ago
10.1038/srep15076
Blood-Brain Barrier Opening in Behaving Non-Human Primates via Focused Ultrasound with Systemically Administered Microbubbles
Cited by: 81
Author(s): Matthew Downs, Amanda Buch, Maria Eleni Karakatsani, Elisa E. Konofagou, Vincent P. Ferrera
Software Mentions: 1
Published: about 9 years ago
10.1371/journal.pone.0188122
Resting-state fMRI in sleeping infants more closely resembles adult sleep than adult wakefulness
Cited by: 47
Author(s): Anish Mitra, Abraham Z. Snyder, Enzo Tagliazucchi, Helmut Laufs, Jed T. Elison, Robert Wall Emerson, Mark D. Shen, Jason J. Wolff, Kelly N. Botteron, Stephen R. Dager, Annette Estes, Alan C. Evans, Guido Gerig, Heather C. Hazlett, Sarah Paterson, Robert T. Schultz, Martin Styner, Lonnie Zwaigenbaum, Bradley L. Schlaggar, Joseph Piven, John R. Pruett, Marcus E. Raichle
Software Mentions: 1
Published: almost 7 years ago
10.1038/s41598-019-50042-1
The human amygdala disconnecting from auditory cortex preferentially discriminates musical sound of uncertain emotion by altering hemispheric weighting
Cited by: 2
Author(s): Francis A. M. Manno, Condon Lau, Juan Fernández-Ruíz, Sinaí Hernandez Cortes Manno, Shuk Han Cheng, Fernando A. Barrios
Software Mentions: 1
Published: about 5 years ago
10.1371/journal.pbio.3000349
Identification of traits and functional connectivity-based neurotraits of chronic pain
Cited by: 30
Author(s): Étienne Vachon-Presseau, Sara Berger, Taha Abdullah, James W. Griffith, Thomas J. Schnitzer, A. Vania Apkarian
Software Mentions: 1
Published: about 5 years ago
10.1007/s00330-018-5351-0
Apparent diffusion coefficient for molecular subtyping of non-gadolinium-enhancing WHO grade II/III glioma: volumetric segmentation versus two-dimensional region of interest analysis
Cited by: 48
Author(s): Steffi Thust, Sara Hassanein, Sotirios Bisdas, Jeremy Rees, Harpreet Hyare, John Maynard, Sebastian Brandner, Carmen Tur, Hans Rolf Jäger, Tarek Yousry, Laura Mancini
Software Mentions: 1
Published: over 6 years ago
10.1016/j.ebr.2021.100467
Effects of anterior thalamic nuclei stimulation on hippocampal activity: Chronic recording in a patient with drug-resistant focal epilepsy
Cited by: 10
Author(s): Alexander B Silva, Ankit N. Khambhati, Benjamin Speidel, Edward F. Chang, Vikram R. Rao
Software Mentions: 1
Published: almost 4 years ago