pypi: predictor | Projects | Ecosyste.ms: Papers

10.1186/1471-2164-12-192

FungalRV: adhesin prediction and immunoinformatics portal for human fungal pathogens
Cited by: 64
Author(s): Rupanjali Chaudhuri, Faraz Alam Ansari, Muthukurussi Varieth Raghunandanan, Srinivasan Ramachandran
Software Mentions: 4
Published: over 13 years ago

10.1016/j.cell.2013.06.040

Genome Sequencing Reveals Loci under Artificial Selection that Underlie Disease Phenotypes in the Laboratory Rat
Cited by: 148
Author(s): Santosh S. Atanur, Ana García Díaz, Klio Maratou, Allison B. Sarkis, Maxime Rotival, Laurence Gamé, Michael Tschannen, Pamela J. Kaisaki, G. Otto, Man Chun John, Thomas M. Keane, Oliver Hummel, Kathrin Saar, Weiwei Chen, Victor Guryev, Kathirvel Gopalakrishnan, Michael R. Garrett, Bina Joe, Lorena Citterio, Giuseppe Bianchi, Martin W. McBride, Anna F. Dominiczak, David J. Adams, Tadao Serikawa, Paul Flicek, Edwin Cuppen, Norbert Hübner, Enrico Petretto, Dominique Guyader, Anne E. Kwitek, Howard J. Jacob, Timothy J. Aitman
Software Mentions: 3
Published: over 11 years ago

10.1016/j.celrep.2019.11.023

Raptor-Mediated Proteasomal Degradation of Deamidated 4E-BP2 Regulates Postnatal Neuronal Translation and NF-κB Activity
Cited by: 6
Author(s): Stella Kouloulia, Erik I. Hallin, Konstanze Simbriger, Inês S. Amorim, Gilliard Lach, Theoklitos Amvrosiadis, Kleanthi Chalkiadaki, Agniete Kampaite, Vinh Tai Truong, Mehdi Hooshmandi, Seyed Mehdi Jafarnejad, Paul Skehel, Petri Kursula, Arkady Khoutorsky, Christos G. Gkogkas
Software Mentions: 3
Published: about 5 years ago

10.1002/ece3.3834

Wrong, but useful: regional species distribution models may not be improved by range‐wide data under biased sampling
Cited by: 53
Author(s): Ahmed El‐Gabbas, Carsten F. Dormann
Software Mentions: 3
Published: almost 7 years ago

10.1371/journal.pone.0187926

Rare genetic variants in the endocannabinoid system genes CNR1 and DAGLA are associated with neurological phenotypes in humans
Cited by: 51
Author(s): Douglas R. Smith, Christine M. Stanley, Theodore Foss, Richard G. Boles, Kevin McKernan
Software Mentions: 3
Published: about 7 years ago

10.1371/journal.pone.0242684

Complex genetic dependencies among growth and neurological phenotypes in healthy children: Towards deciphering developmental mechanisms
Cited by: 8
Author(s): Lisa Uechi, Mahjoubeh Jalali, Jayson D. Wilbur, Jonathan French, N L Jumbe, Michael J. Meaney, Peter D. Gluckman, Neerja Karnani, Nikita A. Sakhanenko, David J. Galas
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pone.0155370

Improved Species-Specific Lysine Acetylation Site Prediction Based on a Large Variety of Features Set
Cited by: 26
Author(s): Qiqige Wuyun, Wei Zheng, Yanping Zhang, Jishou Ruan, Gang Hu
Software Mentions: 2
Published: over 8 years ago

10.1186/s13073-015-0235-2

Clinical metagenomic identification of Balamuthia mandrillaris encephalitis and assembly of the draft genome: the continuing case for reference genome sequencing
Cited by: 97
Author(s): Alexander L. Greninger, Kevin Messacar, Thelma H. Dunnebacke, Samia N. Naccache, Scot Federman, Jérôme Bouquet, David M. Mirsky, Yoshihiko Nomura, Shigeo Yagi, Carol Glaser, Michael Vollmer, Craig A. Press, Bette K. Kleinschmidt‐DeMasters, Samuel R. Dominguez, Charles Y. Chiu
Software Mentions: 2
Published: about 9 years ago

10.1186/s12864-015-1570-9

Comparative genome analysis of Pseudogymnoascus spp. reveals primarily clonal evolution with small genome fragments exchanged between lineages
Cited by: 12
Author(s): Evgeny Leushkin, Maria D. Logacheva, Aleksey A. Penin, Roman A. Sutormin, Evgeny S. Gerasimov, Г. А. Кочкина, N. E. Ivanushkina, O. V. Vasilenko, Alexey S. Kondrashov, S. M. Ozerskaya
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pcbi.1007291

Patient Dossier: Healthcare queries over distributed resources
Cited by: 2
Author(s): Miguél Vázquez, Alfonso Valencia
Software Mentions: 2
Published: about 5 years ago

10.1371/journal.pone.0032658

Membrane Topology and Predicted RNA-Binding Function of the ‘Early Responsive to Dehydration (ERD4)’ Plant Protein
Cited by: 30
Author(s): Archana Rai, Penna Suprasanna, S.F. D’Souza, Vinay Kumar
Software Mentions: 2
Published: almost 13 years ago

10.1186/s12859-020-03617-z

Large-scale prediction and analysis of protein sub-mitochondrial localization with DeepMito
Cited by: 7
Author(s): Castrense Savojardo, Pier Luigi Martelli, Gabriele Tartari, Rita Casadio
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0169910

Predicting the Metabolic Sites by Flavin-Containing Monooxygenase on Drug Molecules Using SVM Classification on Computed Quantum Mechanics and Circular Fingerprints Molecular Descriptors
Cited by: 7
Author(s): Fu Chien-wei, Thy‐Hou Lin
Software Mentions: 2
Published: almost 8 years ago

10.18632/genesandcancer.207

Variant profiles of genes mapping to chromosome 16q loss in Wilms tumors reveals link to cilia-related genes and pathways
Cited by: 1
Author(s): Eiko Kitamura, John K. Cowell, Chang Sheng Chang, Lesleyann Hawthorn
Software Mentions: 1
Published: about 4 years ago

10.1093/gbe/evy054

Signatures of Long-Term Balancing Selection in Human Genomes
Cited by: 95
Author(s): Bárbara Domingues Bitarello, Cesare de Filippo, João C. Teixeira, Joshua M. Schmidt, Philip Kleinert, Diogo Meyer, Aida M. Andrés
Software Mentions: 1
Published: almost 7 years ago

10.1186/1758-2946-6-29

Cytochrome P450 site of metabolism prediction from 2D topological fingerprints using GPU accelerated probabilistic classifiers
Cited by: 26
Author(s): Jonathan D. Tyzack, Hamse Y. Mussa, Mark J. Williamson, Johannes Kirchmair, Robert C. Glen
Software Mentions: 1
Published: over 10 years ago

10.1038/srep09909

Prediction of novel alloy phases of Al with Sc or Ta
Cited by: 23
Author(s): Ante Bilić, Julian D. Gale, Mark Gibson, Nick Wilson, Katherine McGregor
Software Mentions: 1
Published: over 9 years ago

10.1038/srep45281

Bivariate genomic analysis identifies a hidden locus associated with bacteria hypersensitive response in Arabidopsis thaliana
Cited by: 2
Author(s): Biao Wang, Zhuocheng Li, Weilin Xu, Xiao Feng, Qianhui Wan, Yanjun Zan, Sitong Sheng, Xia Shen
Software Mentions: 1
Published: over 7 years ago

10.1038/s41598-018-24445-5

Identification of human glycosyltransferase genes expressed in erythroid cells predicts potential carbohydrate blood group loci
Cited by: 9
Author(s): Magnus Jöud, Mattias Möller, Martin L. Olsson
Software Mentions: 1
Published: over 6 years ago

10.1155/2021/5521411

Diversification of Pakistani Amelogenin-Y-Null Male Haplotypes
Cited by: 0
Author(s): Nasir Siddique, Ahmad Ali Shahid, Kalsoom Sughra
Software Mentions: 1
Published: over 3 years ago

10.1186/s40478-016-0381-9

Amyloid-β 1–24 C-terminal truncated fragment promotes amyloid-β 1–42 aggregate formation in the healthy brain
Cited by: 29
Author(s): Sonia Mazzitelli, Fabia Filipello, Marco Rasile, Eliana Lauranzano, Chiara Starvaggi Cucuzza, Matteo Tamborini, Davide Pozzi, Isabella Barajon, Toni Giorgino, Antonino Natalello, Michela Matteoli
Software Mentions: 1
Published: about 8 years ago

10.1016/j.jprot.2016.04.023

The effects of PPO activity on the proteome of ingested red clover and implications for improving the nutrition of grazing cattle
Cited by: 18
Author(s): Elizabeth H. Hart, Lucy A. Onime, Teresa Davies, Russell M. Morphew, Alison H. Kingston‐Smith
Software Mentions: 1
Published: over 8 years ago

10.1186/1471-2148-8-168

Unique motifs identify PIG-A proteins from glycosyltransferases of the GT4 family
Cited by: 3
Author(s): Nupur Oswal, Narinder Singh Sahni, Alok Bhattacharya, Sneha Sudha Komath, Rohini Muthuswami
Software Mentions: 1
Published: over 16 years ago

10.1186/s12864-019-6171-6

Analysis of functional variants in mitochondrial DNA of Finnish athletes
Cited by: 7
Author(s): Jukka Kiiskilä, Jukka S. Moilanen, Laura Kytövuori, Anna Kaisa Niemi, Kari Majamaa
Software Mentions: 1
Published: about 5 years ago

10.1186/1471-2164-9-364

Whole genome transcription profiling of Anaplasma phagocytophilum in human and tick host cells by tiling array analysis
Cited by: 82
Author(s): Curtis M. Nelson, Michael J. Herron, Roderick F. Felsheim, Brian R Schloeder, Suzanne Grindle, Adela S. Oliva Chávez, Timothy J. Kurtti, Ulrike G. Munderloh
Software Mentions: 1
Published: over 16 years ago

10.1186/s12879-018-3626-3

First insights on the genetic diversity of MDR Mycobacterium tuberculosis in Lebanon
Cited by: 6
Author(s): Balig Panossian, Tamara Salloum, George F. Araj, Georges Khazen, Sima Tokajian
Software Mentions: 1
Published: about 6 years ago

10.1186/s12881-020-01153-4

NGS-based expanded carrier screening for genetic disorders in North Indian population reveals unexpected results – a pilot study
Cited by: 9
Author(s): Kanika Singh, Sunita Bijarnia-Mahay, Vedam Ramprasad, Ratna Dua Puri, Sandhya Nair, Sheetal Sharda, Renu Saxena, Sudha Kohli, Samarth Kulshreshtha, Indrani Ganguli, Kanwal Gujral, Ishwar C. Verma
Software Mentions: 1
Published: about 4 years ago

10.1007/s00335-018-9735-x

Population genetic diversity in zebrafish lines
Cited by: 35
Author(s): Michele R Balik-Meisner, Lisa Truong, Elizabeth H. Scholl, Robert L. Tanguay, David M. Reif
Software Mentions: 1
Published: almost 7 years ago

10.3390/md14070129

Spotlight on Antimicrobial Metabolites from the Marine Bacteria Pseudoalteromonas: Chemodiversity and Ecological Significance
Cited by: 118
Author(s): Clément Offret, Florie Desriac, Patrick Le Chevalier, Jérôme Mounier, Camille Jégou, Yannick Fleury
Software Mentions: 1
Published: over 8 years ago

10.1155/2020/4070419

Molecular Mechanisms Contributing Bacterial Infections to the Incidence of Various Types of Cancer
Cited by: 27
Author(s): Salah A. Sheweita, Awad S. Alsamghan
Software Mentions: 1
Published: over 4 years ago

10.3390/molecules15096106

Heterocyclic Analogues of Xanthone and Xanthione. 1H-Pyrano[2,3-c:6,5-c]dipyrazol-4(7H)-ones and Thiones: Synthesis and NMR Data
Cited by: 19
Author(s): Barbara Datterl, Nicole Tröstner, Dorota Kucharski, W. Hölzer
Software Mentions: 1
Published: over 14 years ago

10.1186/1743-422X-6-173

Characterization of untranslated regions of the salmonid alphavirus 3 (SAV3) genome and construction of a SAV3 based replicon
Cited by: 23
Author(s): Marius Karlsen, Stéphane Villoing, Espen Rimstad, Are Nylund
Software Mentions: 1
Published: about 15 years ago

10.1371/journal.pone.0182138

Exploring public genomics data for population pharmacogenomics
Cited by: 31
Author(s): Kleanthi Lakiotaki, Alexandros Kanterakis, Evgenia Kartsaki, Θεοδώρα Κάτσιλα, George P. Patrinos, George Potamias
Software Mentions: 1
Published: over 7 years ago

10.1371/journal.pone.0006052

Evidence for the Concerted Evolution between Short Linear Protein Motifs and Their Flanking Regions
Cited by: 33
Author(s): Claudia Chica, Francesca Diella, Toby J. Gibson
Software Mentions: 1
Published: over 15 years ago

Ecosyste.ms: Papers

Projects: pypi: predictor

Papers Mentioning predictor 34