Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: panther
https://packages.ecosyste.ms/registries/pypi.org/packages/panther
Fast & Friendly, Web Framework For Building Async APIs
82 versions
Latest release: about 1 year ago
721 downloads last month
Papers Mentioning panther 33
10.1111/eva.13202
Adaptive markers distinguish North and South Pacific Albacore amid low population differentiationCited by: 15
Author(s): Felix Vaux, Sandra Bohn, John R. Hyde, Kathleen G. O’Malley
Software Mentions: 15
Published: over 3 years ago
10.1371/journal.pone.0009327
The Porcelain Crab Transcriptome and PCAD, the Porcelain Crab Microarray and Sequence DatabaseCited by: 21
Author(s): Abderrahmane Tagmount, Mei Wang, Erika Lindquist, Yoshihiro Tanaka, Kristen S. Teranishi, Shinichi Sunagawa, Mike Wong, Jonathon H. Stillman
Software Mentions: 7
Published: over 14 years ago
10.1186/1477-5956-8-59
Proteomic analysis of streptomycin resistant and sensitive clinical isolates of Mycobacterium tuberculosisCited by: 45
Author(s): Prashant Sharma, Bhavnesh Kumar, Yash Gupta, Neelja Singhal, Vishwa Mohan Katoch, K Venkatesan, Deepa Bisht
Software Mentions: 7
Published: almost 14 years ago
10.1111/tpj.14699
Heating quinoa shoots results in yield loss by inhibiting fruit production and delaying maturityCited by: 18
Author(s): Jose C. Tovar, Carlos Quillatupa, Steven T. Callen, S. Elizabeth Castillo, Paige Pearson, Anastasia Shamin, Haley Schuhl, Noah Fahlgren
Software Mentions: 5
Published: over 4 years ago
10.1111/mec.15401
Comparative and population genomics approaches reveal the basis of adaptation to deserts in a small rodentCited by: 34
Author(s): Anna Tigano, Jocelyn P. Colella, Matthew D. MacManes
Software Mentions: 4
Published: over 4 years ago
10.7554/eLife.47293
tec-1 kinase negatively regulates regenerative neurogenesis in planariansCited by: 9
Author(s): Alexander Karge, Nicolle A. Bonar, Scott T. Wood, Christian P. Petersen
Software Mentions: 3
Published: almost 5 years ago
10.14814/phy2.15004
Differential inflammatory responses of the native left and right ventricle associated with donor heart preservationCited by: 2
Author(s): Ienglam Lei, Wei Huang, Peter A. Ward, Jordan S. Pober, George Tellides, Gorav Ailawadi, Francis D. Pagani, Andrew P. Landstrom, Zhong Wang, Richard M. Mortensen, Marília Cascalho, Jeffrey L. Platt, Yuqing Eugene Chen, Hugo Yu Kor Lam, Paul C. Tang
Software Mentions: 3
Published: about 3 years ago
10.1038/s41598-017-18985-5
Splicing of platelet resident pre-mRNAs upon activation by physiological stimuli results in functionally relevant proteome modificationsCited by: 61
Author(s): Giovanni Nassa, Giorgio Giurato, Giovanni Cimmino, Francesca Rizzo, Maria Ravo, Annamaria Salvati, Tuula A. Nyman, Yong Zhu, Mattias Vesterlund, Janne Lehtiö, Paolo Golino, Alessandro Weisz, Roberta Tarallo
Software Mentions: 3
Published: almost 7 years ago
10.18632/oncotarget.15514
Identification and analysis of mutational hotspots in oncogenes and tumour suppressorsCited by: 22
Author(s): Hanadi M. Baeissa, Graeme Benstead-Hume, Christopher J. K. Richardson, Frances M. G. Pearl
Software Mentions: 2
Published: over 7 years ago
10.1186/s12906-019-2428-5
Validation of the anti-infective potential of a polyherbal ‘Panchvalkal’ preparation, and elucidation of the molecular basis underlining its efficacy against Pseudomonas aeruginosaCited by: 16
Author(s): Chinmayi Joshi, Pooja Patel, Hanmanthrao Palep, Vijay Kothari
Software Mentions: 2
Published: almost 6 years ago
10.1186/1471-2164-16-S8-S8
Conditional entropy in variation-adjusted windows detects selection signatures associated with expression quantitative trait loci (eQTLs)Cited by: 3
Author(s): Samuel K. Handelman, Michał Seweryn, Ryan M. Smith, Katherine E. Hartmann, Daqing Wang, Maciej Pietrzak, Andrew D. Johnson, Andrzej Kloczkowski, Wolfgang Sadée
Software Mentions: 2
Published: over 9 years ago
10.1002/1878-0261.12506
Joint action of miR‐126 and MAPK/PI3K inhibitors against metastatic melanomaCited by: 13
Author(s): Francesca Pedini, Gabriele De Luca, Federica Felicetti, Rossella Puglisi, Alessandra Boe, Maria Beatrice Arasi, Federica Fratini, Gianfranco Mattia, Massimo Spada, Simona Caporali, Mauro Biffoni, Alessandro Giuliani, Alessandra Caré, Nadia Felli
Software Mentions: 2
Published: over 5 years ago
10.1002/1878-0261.12153
Tumor‐adjacent tissue co‐expression profile analysis reveals pro‐oncogenic ribosomal gene signature for prognosis of resectable hepatocellular carcinomaCited by: 119
Author(s): Oleg V. Grinchuk, Surya Pavan Yenamandra, Ramakrishnan Iyer, Malay Singh, Hwee Kuan Lee, Kiat Hon Lim, Pierce K. H. Chow, V. Kuznetsov
Software Mentions: 2
Published: almost 7 years ago
10.1111/tpj.13752
Affinity proteomics reveals extensive phosphorylation of the Brassica chromosome axis protein <scp>ASY</scp>1 and a network of associated proteins at prophase I of meiosisCited by: 45
Author(s): Kim Osman, Jianhua Yang, Elisabeth Roitinger, Christophe Lambing, Stefan Heckmann, Elaine C. Howell, María Cuacos, Richard Imre, Gerhard Dürnberger, Karl Mechtler, Susan J. Armstrong, F. Christopher H. Franklin
Software Mentions: 2
Published: almost 7 years ago
10.1371/journal.pone.0176067
A genomics approach identifies selective effects of trans-resveratrol in cerebral cortex neuron and glia gene expressionCited by: 8
Author(s): Gemma Navarro, Eva Martínez‐Pinilla, Alejandro Sánchez-Melgar, Raquel Ortiz, Vèronique Noé, Mairena Martı́n, Carlos J. Ciudad, Rafael Franco
Software Mentions: 2
Published: over 7 years ago
10.1371/journal.pone.0116096
A Genome-Wide siRNA Screen in Mammalian Cells for Regulators of S6 PhosphorylationCited by: 9
Author(s): Angela Papageorgiou, Joseph Rapley, Jill P. Mesirov, Pablo Tamayo, Joseph Avruch
Software Mentions: 2
Published: over 9 years ago
10.1371/journal.pone.0102515
Comparative 2D-DIGE Proteomic Analysis of Bovine Mammary Epithelial Cells during Lactation Reveals Protein Signatures for Lactation Persistency and Milk YieldCited by: 38
Author(s): Jagadeesh Janjanam, Surender Singh, Manoj Kumar Jena, N.K. Varshney, Srujana Kola, Sudarshan Kumar, Jai K. Kaushik, Sunita Grover, Ajay Kumar Dang, Manishi Mukesh, B.S. Prakash, Ashok Kumar Mohanty
Software Mentions: 2
Published: about 10 years ago
10.3389/fimmu.2018.00192
Infectious Sporozoites of Plasmodium berghei Effectively Activate Liver CD8α+ Dendritic CellsCited by: 12
Author(s): Rajesh Parmar, Hardik Patel, Naveen Yadav, Ritika Parikh, Khyati Patel, Aditi Mohankrishnan, Vishakha Bhurani, Urja Joshi, Sarat K. Dalai
Software Mentions: 2
Published: almost 7 years ago
10.1038/srep37099
Comprehensive Gene expression meta-analysis and integrated bioinformatic approaches reveal shared signatures between thrombosis and myeloproliferative disordersCited by: 21
Author(s): Pawan Kumar Jha, Aatira Vijay, Abhiram Sahu, Mohammad Zahid Ashraf
Software Mentions: 2
Published: almost 8 years ago
10.1038/s41598-019-45284-y
Dynamic adaptation of mesenchymal stem cell physiology upon exposure to surface micropatternsCited by: 31
Author(s): Nick R. M. Beijer, Zarina Nauryzgaliyeva, Estela M. Arteaga, Laurent Pieuchot, Karine Anselme, Jeroen van de Peppel, Aliaksei Vasilevich, Nathalie Gröen, Nadia Roumans, Dennie G. A. J. Hebels, Jan de Boer
Software Mentions: 2
Published: over 5 years ago
10.1186/s13395-019-0203-4
Culturing C2C12 myotubes on micromolded gelatin hydrogels accelerates myotube maturationCited by: 70
Author(s): Lance T. Denes, Lance A. Riley, Joseph R. Mijares, J. D. Arboleda, Kendra K. McKee, Karyn A. Esser, Eric T. Wang
Software Mentions: 2
Published: over 5 years ago
10.1371/journal.pone.0006309
Differential Micro RNA Expression in PBMC from Multiple Sclerosis PatientsCited by: 210
Author(s): David Otaegui, Sergio E. Baranzini, Rubén Armañanzas, B. Calvo, Maider Muñoz-Culla, Puya Khankhanian, Iñaki Inza, José A. Lozano, Tamara Castillo-Triviño, A Asensio, Javier Olaskoaga, Adolfo López de Munaín
Software Mentions: 1
Published: over 15 years ago
10.1007/s00401-020-02200-3
APOE and TREM2 regulate amyloid-responsive microglia in Alzheimer’s diseaseCited by: 97
Author(s): Aivi T. Nguyen, Kui Wang, Gang Hu, Xuran Wang, Zhen Miao, Joshua A Azevedo, EunRan Suh, Vivianna M. Van Deerlin, David Choi, Kathryn Roeder, Mingyao Li, Edward B. Lee
Software Mentions: 1
Published: about 4 years ago
10.1371/journal.pbio.3000185
A novel evolutionary conserved mechanism of RNA stability regulates synexpression of primordial germ cell-specific genes prior to the sex-determination stage in medakaCited by: 8
Author(s): Amaury Herpin, Cornelia Schmidt, Susanne Kneitz, Clara Gobé, Martina Regensburger, Aurélie Le Cam, Jérôme Montfort, Mateus Contar Adolfi, Christina Lillesaar, Dagmar Wilhelm, Michael Kraeussling, Brigitte Mourot, Béatrice Porcon, Maëlle Pannetier, Eric Pailhoux, Laurence Ettwiller, Dirk Dolle, Yann Guiguen, Manfred Schartl
Software Mentions: 1
Published: over 5 years ago
10.1038/srep15923
Evidence for microRNA-31 dependent Bim-Bax interaction preceding mitochondrial Bax translocation during radiation-induced apoptosisCited by: 18
Author(s): Ashish Kumar, Sourish Ghosh, Sudhir Chandna
Software Mentions: 1
Published: about 9 years ago
10.1186/s13287-020-01692-w
Genome-wide transcriptome analysis reveals equine embryonic stem cell-derived tenocytes resemble fetal, not adult tenocytesCited by: 5
Author(s): Yasmin Z Paterson, Adam P. Cribbs, M. Espenel, Emily Josephine Smith, Frances Henson, Deborah J. Guest
Software Mentions: 1
Published: over 4 years ago
10.1038/s41416-020-0772-3
Global analysis of human glycosyltransferases reveals novel targets for pancreatic cancer pathogenesisCited by: 23
Author(s): Rohitesh Gupta, Frank Leon, Christopher Thompson, Rama Krishna Nimmakayala, Saswati Karmakar, Palanisamy Nallasamy, Seema Chugh, Dipakkumar R. Prajapati, Satyanarayana Rachagani, Sushil Kumar, Moorthy P. Ponnusamy
Software Mentions: 1
Published: over 4 years ago
10.1038/s41598-018-38057-6
micro-RNAs dependent regulation of DNMT and HIF1α gene expression in thrombotic disordersCited by: 6
Author(s): Aatira Vijay, Pawan Kumar Jha, Iti Garg, Manish Sharma, Mohammad Zahid Ashraf, Bhuvnesh Kumar
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0005896
SLC30A3 (ZnT3) Oligomerization by Dityrosine Bonds Regulates Its Subcellular Localization and Metal Transport CapacityCited by: 48
Author(s): Gloria Salazar, Juan Manuel Falcón‐Pérez, Robert W. Harrison, Víctor Faúndez
Software Mentions: 1
Published: over 15 years ago
10.6026/97320630014008
Identification of coding sequence and its use for functional and structural characterization of catalase from Phyllanthus emblicaCited by: 2
Author(s): Swati Sharma, Hooda
Software Mentions: 1
Published: almost 7 years ago
10.1371/journal.pone.0151034
The Effect of Chronic Methamphetamine Exposure on the Hippocampal and Olfactory Bulb Neuroproteomes of RatsCited by: 13
Author(s): Rui Zhu, Tianjiao Yang, Firas Kobeissy, Tarek H. Mouhieddine, Mohamad Raad, Amaly Nokkari, Mark S. Gold, Kevin Wang, Yehia Mechref
Software Mentions: 1
Published: over 8 years ago
10.3390/cells10061480
In Silico Identification of miRNA–lncRNA Interactions in Male Reproductive Disorder Associated with COVID-19 InfectionCited by: 12
Author(s): Soudabeh Sabetian, Isabella Castiglioni, Bahia Namavar Jahromi, Pegah Mousavi, Claudia Cava
Software Mentions: 1
Published: over 3 years ago
10.1155/2012/957607
Identification and Characterization of MicroRNAs inMacaca fascicularisby EST AnalysisCited by: 7
Author(s): Hao Yang, Haiyang Zhang, Lin Zhu, Chenyu Zhang, Donghai Li
Software Mentions: 1
Published: almost 13 years ago