Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: analyst
https://packages.ecosyste.ms/registries/pypi.org/packages/analyst
Data analysis toolkit
3 versions
Latest release: over 6 years ago
24 downloads last month
Papers Mentioning analyst 34
10.3389/fgene.2021.721873
Screening of DNA Damage Repair Genes Involved in the Prognosis of Triple-Negative Breast Cancer Patients Based on BioinformaticsCited by: 4
Author(s): Nan Wang, Yuanting Gu, Jiangrui Chi, Xinwei Li, Youyi Xiong, Chaochao Zhong, Fang Wang, Xinxing Wang, Lin Li
Software Mentions: 5
Published: over 3 years ago
10.1002/1878-0261.12797
Optimized low‐dose combinatorial drug treatment boosts selectivity and efficacy of colorectal carcinoma treatmentCited by: 19
Author(s): Marloes Zoetemelk, George M. Ramzy, Magdalena Rausch, Thibaud Koessler, Judy R. van Beijnum, Andrea Weiss, Valentin Mieville, Sander R. Piersma, Richard R. de Haas, Céline Delucinge-Vivier, Axel Andrès, Christian Toso, Alex A. Henneman, Simone Ragusa, Tatiana V. Petrova, Mylène Docquier, Thomas McKee, Connie R. Jiménez, Youssef Daali, Arjan W. Griffioen, Laura Rubbia‐Brandt, Pierre‐Yves Dietrich, Patrycja Nowak-Śliwińska
Software Mentions: 3
Published: about 4 years ago
10.3390/ijms22168751
Integrated Metabolomic and Transcriptomic Analysis Reveals the Flavonoid Regulatory Network by Eutrema EsMYB90Cited by: 8
Author(s): Yuting Qi, Chuanshun Li, Chonghao Duan, Caihong Gu, Quan Zhang
Software Mentions: 3
Published: over 3 years ago
10.1371/journal.pgen.1009069
Mesenchyme-derived IGF2 is a major paracrine regulator of pancreatic growth and functionCited by: 16
Author(s): Constanze M. Hammerle, Ionel Sandovici, Gemma V. Brierley, Nicola Smith, Warren E. Zimmer, Ilona Zvetkova, Haydn M. Prosser, Yoichi Sekita, Brian Lam, Marcella Ma, Wendy N. Cooper, Antonio Vidal‐Puig, Susan E. Ozanne, Gema Medina‐Gómez, Miguel Constância
Software Mentions: 3
Published: about 4 years ago
10.1186/s13287-018-0867-4
Early passaging of mesenchymal stem cells does not instigate significant modifications in their immunological behaviorCited by: 26
Author(s): Niketa Sareen, Glen Lester Sequiera, Rakesh Chaudhary, Ejlal Abu‐El‐Rub, Subir Roy Chowdhury, Vikram Sharma, Arun Surendran, Meenal Moudgil, Paul Fernyhough, Amir Ravandi, Sanjiv Dhingra
Software Mentions: 2
Published: over 6 years ago
10.1111/iep.12240
Hepatocellular carcinoma in a mouse model fed a choline‐deficient, L‐amino acid‐defined, high‐fat dietCited by: 54
Author(s): Ayae Ikawa-Yoshida, Saori Matsuo, Atsuhiko Kato, Yusuke Ohmori, Atsuko Higashida, Eiji Kaneko, Masahiko Matsumoto
Software Mentions: 2
Published: over 7 years ago
10.3390/microorganisms8071011
Autoimmune Hepatitis: Shifts in Gut Microbiota and Metabolic Pathways among Egyptian PatientsCited by: 26
Author(s): Nahla M Elsherbiny, Mohammed Rammadan, Elham Ahmed Hassan, Marfoua S. Ali, Abeer S. Abd El-Rehim, Wael A. Abbas, Mohamed A A Abozaid, Ebtisam Hassanin, Helal F Hetta
Software Mentions: 2
Published: over 4 years ago
10.3389/fnins.2021.631892
RPL6: A Key Molecule Regulating Zinc- and Magnesium-Bound Metalloproteins of Parkinson’s DiseaseCited by: 5
Author(s): Athira Anirudhan, Paola Isabel Angulo-Bejarano, Paramasivam Prabu, Kalaivani Manokaran, S. Manjunath Kamath, Ram Murugesan, Ashutosh Sharma, Shiek S. S. J. Ahmed
Software Mentions: 2
Published: almost 4 years ago
10.1186/1743-8977-7-31
Dispersion of single-walled carbon nanotubes by a natural lung surfactant for pulmonary in vitro and in vivo toxicity studiesCited by: 114
Author(s): Liying Wang, Vincent Castranova, Anurag Mishra, Bean Chen, Robert R. Mercer, Diane Schwegler‐Berry, Yon Rojanasakul
Software Mentions: 1
Published: almost 15 years ago
10.1371/journal.pone.0057466
Caveolin-1 Regulates Endothelial Adhesion of Lung Cancer Cells via Reactive Oxygen Species-Dependent MechanismCited by: 31
Author(s): Pithi Chanvorachote, Preedakorn Chunhacha
Software Mentions: 1
Published: almost 12 years ago
10.1371/journal.pone.0171558
Evolution of blood-brain-barrier permeability after acute ischemic strokeCited by: 120
Author(s): Zamir Merali, Kun Huang, David J. Mikulis, Frank L. Silver, Andrea Kassner
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0145921
Protective Effects of Triphala on Dermal Fibroblasts and Human KeratinocytesCited by: 39
Author(s): Sandeep R. Varma, Thiyagarajan O. Sivaprakasam, Abheepsa Mishra, L M Sharath Kumar, Natalia Prakash, Sunil Prabhu, S. Ramakrishnan
Software Mentions: 1
Published: almost 9 years ago
10.1155/2021/5516655
Stemness-Suppressive Effect of Bibenzyl from Dendrobium ellipsophyllum in Human Lung Cancer Stem-Like CellsCited by: 2
Author(s): Pornchanok Taweecheep, Hnin Ei Ei Khine, Anirut Hlosrichok, Gea Abigail Uy Ecoy, Boonchoo Sritularak, Eakachai Prompetchara, Pithi Chanvorachote, Chatchai Chaotham
Software Mentions: 1
Published: over 3 years ago
10.3389/fgene.2021.692702
Transcriptomics and Metabolomics Reveal Purine and Phenylpropanoid Metabolism Response to Drought Stress in Dendrobium sinense, an Endemic Orchid Species in Hainan IslandCited by: 19
Author(s): Cuili Zhang, Jinhui Chen, Weixia Huang, Xiqiang Song, Jun Niu
Software Mentions: 1
Published: over 3 years ago
10.3389/fonc.2020.01348
Association of the Trough, Peak/Trough Ratio of Imatinib, Pyridine–N-Oxide Imatinib and ABCG2 SNPs 34 G>A and SLCO1B3 334 T>G With Imatinib Response in Egyptian Chronic Myeloid Leukemia PatientsCited by: 6
Author(s): Mervat M. Omran, Raafat Abdelfattah, Heba S. Moussa, Nelly Alieldin, Samia A. Shouman
Software Mentions: 1
Published: over 4 years ago
10.3389/fphar.2018.01173
Impact of Global DNA Methylation in Treatment Outcome of Colorectal Cancer PatientsCited by: 27
Author(s): Mahmoud Fouad, Salem E. Salem, Marwa M. Hussein, Abdel‐Rahman N. Zekri, Hafez F. Hafez, Eman D. El Desouky, Samia A. Shouman
Software Mentions: 1
Published: about 6 years ago
10.3389/fphys.2014.00222
Role of H-Ras/ERK signaling in carbon nanotube-induced neoplastic-like transformation of human mesothelial cellsCited by: 14
Author(s): Warangkana Lohcharoenkal, Liying Wang, Todd A. Stueckle, Jino Park, William Ka Fai Tse, Cerasela-Zoica Dinu, Yon Rojanasakul
Software Mentions: 1
Published: over 10 years ago
10.1186/2052-336X-12-60
Effects of forest areas on air quality; Aras Basin and its environmentCited by: 7
Author(s): Metin Demir, Turgay Dindaroğlu, Sevgi Yılmaz
Software Mentions: 1
Published: almost 11 years ago
10.1080/14756366.2020.1804383
Design, synthesis and biological evaluation of a new thieno[2,3-<i>d</i>]pyrimidine-based urea derivative with potential antitumor activity against tamoxifen sensitive and resistant breast cancer cell linesCited by: 13
Author(s): Marwa Sharaky, Marwa Kamel, M. Abdel Aziz, Mervat M. Omran, Monira M. Rageh, Khaled A. M. Abouzid, Samia A. Shouman
Software Mentions: 1
Published: almost 5 years ago
10.1093/jxb/erx008
Increasing carbon availability stimulates growth and secondary metabolites via modulation of phytohormones in winter wheatCited by: 23
Author(s): Jianbei Huang, Michael Reichelt, Somak Chowdhury, Almuth Hammerbacher, Henrik Hartmann
Software Mentions: 1
Published: almost 8 years ago
10.1038/srep39558
Induction of cancer-associated fibroblast-like cells by carbon nanotubes dictates its tumorigenicityCited by: 16
Author(s): Sudjit Luanpitpong, Liying Wang, Vincent Castranova, Cerasela Zoica Dinu, Surapol Issaragrisil, Yi Charlie Chen, Yon Rojanasakul
Software Mentions: 1
Published: almost 8 years ago
10.1038/s41598-017-15812-9
Predicted molecular targets and pathways for germacrone, curdione, and furanodiene in the treatment of breast cancer using a bioinformatics approachCited by: 32
Author(s): Qi Kong, Yan Ma, Jie Yu, Xiuping Chen
Software Mentions: 1
Published: about 7 years ago
10.1038/s41598-018-35271-0
Persistent metabolic changes in HIV-infected patients during the first year of combination antiretroviral therapyCited by: 36
Author(s): N. Chantal Peltenburg, Johannes C. Schoeman, Jun Hou, Fernando Mora, Amy C. Harms, Selwyn H. Lowe, Jörgen Bierau, J. Bakker, Annelies Verbon, Thomas Hankemeier, André Boonstra
Software Mentions: 1
Published: about 6 years ago
10.1038/s41598-021-83606-1
Chemosensitizing activity of peptide from Lentinus squarrosulus (Mont.) on cisplatin-induced apoptosis in human lung cancer cellsCited by: 8
Author(s): Hnin Ei Ei Khine, Gea Abigail Uy Ecoy, Sittiruk Roytrakul, Narumon Phaonakrop, Natapol Pornputtapong, Eakachai Prompetchara, Pithi Chanvorachote, Chatchai Chaotham
Software Mentions: 1
Published: almost 4 years ago
10.1186/s12866-014-0241-3
Virulence and genotypic characterization of Listeria monocytogenes isolated from vegetable and soil samplesCited by: 58
Author(s): Dharmendra Kumar Soni, Major Singh, Deepika Singh, Suresh Kumar Dubey
Software Mentions: 1
Published: over 10 years ago
10.21307/jofnem-2020-033
Spatial distribution and risk area assessment of <i>Aphelenchoides besseyi</i> using geostatistical approaches in Giridih district of Jharkhand, IndiaCited by: 1
Author(s): Sandip Mondal, Matiyar Rahaman Khan, Abhishek Mukherjee
Software Mentions: 1
Published: almost 5 years ago
10.1186/s12890-017-0545-9
Gene expression analysis in asthma using a targeted multiplex arrayCited by: 26
Author(s): Chris D. Pascoe, Ma’en Obeidat, Bryna A. Arsenault, Yunlong Nie, Stephanie Warner, Dorota Stefanowicz, Samuel J. Wadsworth, Jeremy A. Hirota, Sungchil Yang, Delbert R. Dorscheid, Chris Carlsten, Tillie L. Hackett, Chun Y. Seow, Peter D. Paré
Software Mentions: 1
Published: about 7 years ago
10.1186/1746-6148-9-59
Bilateral central pain sensitization in rats following a unilateral thalamic lesion may be treated with high doses of ketamineCited by: 19
Author(s): Aude Castel, Pierre Hélie, Francis Beaudry, Pascal Vachon
Software Mentions: 1
Published: over 11 years ago
10.1155/2013/765894
Moscatilin Inhibits Lung Cancer Cell Motility and Invasion via Suppression of Endogenous Reactive Oxygen SpeciesCited by: 39
Author(s): Akkarawut Kowitdamrong, Pithi Chanvorachote, Boonchoo Sritularak, Varisa Pongrakhananon
Software Mentions: 1
Published: almost 12 years ago
10.3390/molecules26072046
Development of a Multimatrix UHPLC-MS/MS Method for the Determination of Paracetamol and Its Metabolites in Animal TissuesCited by: 6
Author(s): Konrad Pietruk, Małgorzata Gbylik-Sikorska, Beata Łebkowska‐Wieruszewska, Anna Gajda, Mario Giorgi, Irene Sartini, Piotr Jedziniak
Software Mentions: 1
Published: over 3 years ago
10.3390/molecules23071736
Quick Multi-Class Determination of Residues of Antimicrobial Veterinary Drugs in Animal Muscle by LC-MS/MSCited by: 10
Author(s): Meiyu Zhang, Erfen Li, Yijuan Su, Yingxia Zhang, Jingmeng Xie, Lili He
Software Mentions: 1
Published: over 6 years ago
10.1186/s13071-017-2357-4
Modelling the current distribution and predicted spread of the flea species Ctenocephalides felis infesting outdoor dogs in SpainCited by: 13
Author(s): Rosa Gálvez, Vicenzo Musella, M.Ά. Descalzo, Ana Montoya, Rocío Checa, Valentina Marino, Oihane Martín, Giuseppe Cringoli, Laura Rinaldi, Guadalupe Miró
Software Mentions: 1
Published: about 7 years ago
10.1186/1743-8977-11-22
Induction of stem-like cells with malignant properties by chronic exposure of human lung epithelial cells to single-walled carbon nanotubesCited by: 49
Author(s): Sudjit Luanpitpong, Liying Wang, Vincent Castranova, Yon Rojanasakul
Software Mentions: 1
Published: over 10 years ago