Ecosyste.ms: Papers

10.3762/bjnano.9.20

Humidity-dependent wound sealing in succulent leaves of <i>Delosperma cooperi –</i> An adaptation to seasonal drought stress
Cited by: 29
Author(s): Olga Speck, Mark Schlechtendahl, Florian Borm, Tim Kampowski, Thomas Speck
Software Mentions: 6
Published: over 6 years ago

10.3389/fninf.2019.00056

Curated Model Development Using NEUROiD: A Web-Based NEUROmotor Integration and Design Platform
Cited by: 7
Author(s): Raghu Sesha Iyengar, Madhav Vinodh Pithapuram, Amreek Singh, Madhusudan Raghavan
Software Mentions: 4
Published: almost 5 years ago

10.3389/fcell.2021.685494

Novel Functional Genes Involved in Transdifferentiation of Canine ADMSCs Into Insulin-Producing Cells, as Determined by Absolute Quantitative Transcriptome Sequencing Analysis
Cited by: 2
Author(s): Pengxiu Dai, Jiakai Li, Yijing Chen, Luwen Zhang, Xinke Zhang, Jinglu Wang, Guixiang Qi, Yihua Zhang
Software Mentions: 3
Published: almost 3 years ago

10.1186/s12983-017-0228-7

Sleeping site ecology, but not sex, affect ecto- and hemoparasite risk, in sympatric, arboreal primates (Avahi occidentalis and Lepilemur edwardsi)
Cited by: 14
Author(s): May Hokan, Christina Strübe, Ute Radespiel, Elke Zimmermann
Software Mentions: 3
Published: over 6 years ago

10.3389/fimmu.2020.01999

Validation of a Combined Transcriptome and T Cell Receptor Alpha/Beta (TRA/TRB) Repertoire Assay at the Single Cell Level for Paucicellular Samples
Cited by: 3
Author(s): Nicolle H.R. Litjens, Anton W. Langerak, Amy C. J. van der List, Mariska Klepper, Maaike de Bie, Zakia Azmani, Alexander T. den Dekker, Rutger W. W. Brouwer, M. Betjes, Wilfred F. J. van IJcken
Software Mentions: 3
Published: almost 4 years ago

10.1111/tpj.12319

Anchoring and ordering <scp>NGS</scp> contig assemblies by population sequencing (<scp>POPSEQ</scp>)
Cited by: 244
Author(s): Martin Mascher, Gary J. Muehlbauer, Daniel S. Rokhsar, Jarrod Chapman, Jeremy Schmutz, Kerrie Barry, María Muñoz‐Amatriaín, Timothy J. Close, Roger P. Wise, Alan H. Schulman, Axel Himmelbach, Klaus Mayer, Uwe Scholz, Jesse Poland, Nils Stein, Robbie Waugh
Software Mentions: 2
Published: over 10 years ago

10.3390/cancers12071836

Tumor-Targeting Peptides: The Functional Screen of Glioblastoma Homing Peptides to the Target Protein FABP3 (MDGI)
Cited by: 5
Author(s): Abiodun Ayo, Eduard Figueras, Thomas Schachtsiek, Mazlum Budak, Norbert Sewald, Pirjo Laakkonen
Software Mentions: 2
Published: almost 4 years ago

10.7554/eLife.62586

Single-cell RNA-seq reveals transcriptomic heterogeneity mediated by host–pathogen dynamics in lymphoblastoid cell lines
Cited by: 26
Author(s): Elliott D. SoRelle, Joanne Dai, Emmanuela N Bonglack, Emma M Heckenberg, Jeffrey Y. Zhou, Stephanie N Giamberardino, Jeffrey A. Bailey, Simon Gregory, Cliburn Chan, Micah A. Luftig
Software Mentions: 2
Published: over 3 years ago

10.1007/s00436-021-07233-5

Invasive lizard has fewer parasites than native congener
Cited by: 2
Author(s): Beatriz Tomé, D. James Harris, Ana Perera, Isabel Damas-Moreira
Software Mentions: 1
Published: almost 3 years ago

10.1371/journal.pone.0155274

Multiple Sclerosis Patient-Specific Primary Neurons Differentiated from Urinary Renal Epithelial Cells via Induced Pluripotent Stem Cells
Cited by: 12
Author(s): Megan G. Massa, Barbara Gisevius, Sarah Hirschberg, Lisa D. Hinz, Matthias Schmidt, Ralf Gold, Nora Prochnow, Aiden Haghikia
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0148252

Fibroblast Growth Factor 21 (FGF21) Protects against High Fat Diet Induced Inflammation and Islet Hyperplasia in Pancreas
Cited by: 90
Author(s): Garima Singhal, Ffolliott M. Fisher, Melissa J. Chee, Tze Guan Tan, Abdelfattah El Ouaamari, Andrew C. Adams, Robert M. Najarían, Rohit Kulkarni, Christophe Benoist, Jeffrey S. Flier, Eleftheria Maratos–Flier
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0135814

Moringa oleifera as an Anti-Cancer Agent against Breast and Colorectal Cancer Cell Lines
Cited by: 181
Author(s): Abdulrahman Alasmari, Sulaiman Mansour Albalawi, Tanwir Athar, Abdul Quaiyoom Khan, Hamoud Al-Shahrani, Mohammad Mahmudul Islam
Software Mentions: 1
Published: almost 9 years ago

10.15252/emmm.202012739

Protective anti‐prion antibodies in human immunoglobulin repertoires
Cited by: 15
Author(s): Assunta Senatore, Karl Frontzek, Marc Emmenegger, Andra Chincisan, Marco Losa, Regina Reimann, Geraldine Horny, Jingjing Guo, Sylvie Fels, Silvia Sorce, Chuanbing Zhu, Nathalie George, Stefan Ewert, Thomas Pietzonka, Simone Hornemann, Adriano Aguzzi
Software Mentions: 1
Published: almost 4 years ago

10.2807/1560-7917.ES.2020.25.9.1900466

Outbreak of gastroenteritis highlighting the diagnostic and epidemiological challenges of enteroinvasive Escherichia coli, County of Halland, Sweden, November 2017
Cited by: 11
Author(s): Nina Lagerqvist, Emma Löf, Theresa Enkirch, Peter Nilsson, Adam Roth, Cecilia Jernberg
Software Mentions: 1
Published: about 4 years ago

10.3389/fphys.2015.00133

Impact of a novel protein meal on the gastrointestinal microbiota and the host transcriptome of larval zebrafish Danio rerio
Cited by: 22
Author(s): E. Rurangwa, Detmer Sipkema, J. Kals, M. ter Veld, Maria Forlenza, Gianina M. Bacanu, Hauke Smidt, Arjan P. Palstra
Software Mentions: 1
Published: about 9 years ago

10.1186/gb-2008-9-6-r101

Modified cell cycle status in a mouse model of altered neuronal vulnerability (slow Wallerian degeneration; Wlds)
Cited by: 25
Author(s): Thomas M. Wishart, Helen Pemberton, Sally James, Chris McCabe, Thomas H. Gillingwater
Software Mentions: 1
Published: over 16 years ago

10.1111/jcmm.15829

LMNA functions as an oncogene in hepatocellular carcinoma by regulating the proliferation and migration ability
Cited by: 14
Author(s): Heng Liu, Dongming Li, Ling Zhou, Shuang Kan, Guozhang He, Kun Zhou, Liping Wang, Ming Chen, Wei Shu
Software Mentions: 1
Published: over 3 years ago

10.1002/cem.3182

Cellwise outlier detection and biomarker identification in metabolomics based on pairwise log ratios
Cited by: 2
Author(s): Jan Walach, Peter Filzmoser, Štěpán Kouřil, David Friedecký, Tomáš Adam
Software Mentions: 1
Published: over 4 years ago

10.3390/s19173788

Software-Defined Network-Based Vehicular Networks: A Position Paper on Their Modeling and Implementation
Cited by: 25
Author(s): Lionel Nkenyereye, Lewis Nkenyereye, Saiful Islam, Yoon–Ho Choi, Muhammad Bilal, Jong-Wook Jang
Software Mentions: 1
Published: almost 5 years ago

10.3390/ijms18040864

ZeGlobalTox: An Innovative Approach to Address Organ Drug Toxicity Using Zebrafish
Cited by: 68
Author(s): Carles Cornet, Simone Calzolari, Rafael Miñana-Prieto, Sylvia Dyballa, Els van Doornmalen, Helma Rutjes, Thierry Savy, Davide D’Amico, Javier Terriente
Software Mentions: 1
Published: about 7 years ago

10.3390/ijms20051058

Cryopreservation of Canine Primary Dorsal Root Ganglion Neurons and Its Impact upon Susceptibility to Paramyxovirus Infection
Cited by: 5
Author(s): Sarah Bettina Schwarz, Ingo Spitzbarth, Wolfgang Baumgärtner, Annika Lehmbecker
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms21093078

Increase in Efficacy of Checkpoint Inhibition by Cytokine-Induced-Killer Cells as a Combination Immunotherapy for Renal Cancer
Cited by: 13
Author(s): Mojgan Naghizadeh Dehno, Yutao Li, Hans Weiher, Ingo G. H. Schmidt‐Wolf
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms22031218

Toward Biofabrication of Resorbable Implants Consisting of a Calcium Phosphate Cement and Fibrin—A Characterization In Vitro and In Vivo
Cited by: 20
Author(s): Tilman Ahlfeld, Anja Lode, Richard Frank Richter, Winnie Pradel, Adrian Franke, Martina Rauner, Bernd Stadlinger, Günter Lauer, Michael Gelinsky, Philippe Korn
Software Mentions: 1
Published: over 3 years ago

10.1186/s12974-021-02200-4

Fundamentally different roles of neuronal TNF receptors in CNS pathology: TNFR1 and IKKβ promote microglial responses and tissue injury in demyelination while TNFR2 protects against excitotoxicity in mice
Cited by: 19
Author(s): Irini Papazian, Eleni Tsoukala, Athena Boutou, Μαρία Καραμίτα, Konstantinos Kambas, Lida Iliopoulou, Roman Fischer, Roland E. Kontermann, Maria C Denis, George Kollias, Hans Lassmann, Lesley Probert
Software Mentions: 1
Published: over 2 years ago

10.1111/acel.12697

PGC-1α affects aging-related changes in muscle and motor function by modulating specific exercise-mediated changes in old mice
Cited by: 45
Author(s): Jonathan F. Gill, Gesa Santos, Svenia Schnyder, Christoph Handschin
Software Mentions: 1
Published: over 6 years ago

10.1155/2019/6492029

MHY2233 Attenuates Replicative Cellular Senescence in Human Endothelial Progenitor Cells <i>via</i> SIRT1 Signaling
Cited by: 34
Author(s): Shreekrishna Lamichane, Sang-Hong Baek, Yeon-Ju Kim, Ji Hye Park, Babita Dahal Lamichane, Woong Bi Jang, Seung-Taek Ji, Na Kyung Lee, Dehua Li, Da Yeon Kim, Su-Tae Kang, Ha Jong Seong, Jisoo Yun, Dong‐Hyung Lee, Hyung Ryong Moon, Hae Young Chung, Sang‐Mo Kwon
Software Mentions: 1
Published: about 5 years ago

10.3390/ani11010179

Luteinizing Hormone Effect on Luteal Cells Is Dependent on the Corpus Luteum Stage in Felids
Cited by: 1
Author(s): Michał M Hryciuk, Katarina Jewgenow, Beate C. Braun
Software Mentions: 1
Published: over 3 years ago

10.1186/s12915-018-0607-3

Evolution of mitochondrial TAT translocases illustrates the loss of bacterial protein transport machines in mitochondria
Cited by: 21
Author(s): Markéta Petrů, Jeremy G. Wideman, Kristoffer Moore, Felicity Alcock, Tracy Palmer, Pavel Doležal
Software Mentions: 1
Published: over 5 years ago

10.1242/bio.20149753

The Rho GTPase Cdc42 regulates hair cell planar polarity and cellular patterning in the developing cochlea
Cited by: 45
Author(s): Anna Kirjavainen, Maarja Laos, Tommi Anttonen, Ulla Pirvola
Software Mentions: 1
Published: about 9 years ago

10.1155/2020/6843180

Perspectives of the Application of Liquid Biopsy in Colorectal Cancer
Cited by: 33
Author(s): Yuhan Ding, Wenxia Li, Kun Wang, Chang Xu, Mengdi Hao, Lei Ding
Software Mentions: 1
Published: about 4 years ago

10.3390/md16120490

Analysis of the Transcriptome of the Red Seaweed Grateloupia imbricata with Emphasis on Reproductive Potential
Cited by: 11
Author(s): Pilar García‐Jiménez, Carlos Lloréns, Francisco J. Roig, Rafael R. Robaina
Software Mentions: 1
Published: over 5 years ago

10.1097/MD.0000000000018581

Diagnostic value of various liquid biopsy methods for pancreatic cancer
Cited by: 44
Author(s): Yuzhou Zhu, Hao Zhang, Nan Chen, Jihua Hao, Hongyu Jin, Xuelei Ma
Software Mentions: 1
Published: over 4 years ago

10.1016/j.omtn.2018.11.011

Genetic Alphabet Expansion Provides Versatile Specificities and Activities of Unnatural-Base DNA Aptamers Targeting Cancer Cells
Cited by: 34
Author(s): Kazunobu Futami, Michiko Kimoto, Yun Wei Shermane Lim, Ichiro Hirao
Software Mentions: 1
Published: over 5 years ago