Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
bioconductor: RCM
Fit row-column association models with the negative binomial distribution for the microbiomePapers that mentioned: 15
pypi: nstruct
Define complicate C/C++ structs in Python to parse/pack them from/to raw bytesPapers that mentioned: 15
cran: ff
Memory-Efficient Storage of Large Data on Disk and Fast Access FunctionsPapers that mentioned: 14
pypi: NanoSV
Structural variation detection tool for Oxford Nanopore data.Papers that mentioned: 14
pypi: pylab
Papers that mentioned: 14pypi: PSCAD
A network toolkit that can be used to scan, sniff and discover hosts.Papers that mentioned: 14
cran: superheat
A Graphical Tool for Exploring Complex Datasets Using HeatmapsPapers that mentioned: 14
cran: SnowballC
Snowball Stemmers Based on the C 'libstemmer' UTF-8 LibraryPapers that mentioned: 14
cran: entropy
Estimation of Entropy, Mutual Information and Related QuantitiesPapers that mentioned: 14
pypi: iml
Interpretable Machine Learning (iML) package. Explain the predictions of any model.Papers that mentioned: 14
pypi: Mikado
A Python3 annotation program to select the best gene model in each locusPapers that mentioned: 14
cran: precrec
Calculate Accurate Precision-Recall and ROC (Receiver Operator Characteristics) CurvesPapers that mentioned: 14
cran: SPEI
Calculation of the Standardized Precipitation-Evapotranspiration IndexPapers that mentioned: 14
pypi: nl
A python library that provides a production system with an API modelled on the natural languagePapers that mentioned: 14
pypi: mri
Papers that mentioned: 14pypi: MDP
MDP is a Python library for building complex data processing software by combining widely used machine learning algorithms into pipelines and networks.Papers that mentioned: 14
pypi: exp
Python tool do design and run experiments with global optimisation and grid searchPapers that mentioned: 14
cran: hydroGOF
Goodness-of-Fit Functions for Comparison of Simulated and Observed Hydrological Time SeriesPapers that mentioned: 14
cran: DCluster
Functions for the Detection of Spatial Clusters of DiseasesPapers that mentioned: 14
bioconductor: iSeq
Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising ModelsPapers that mentioned: 14
pypi: Boris
Easily access and search Barclays bike availability in London, UK.Papers that mentioned: 14
bioconductor: GlobalAncova
Global test for groups of variables via model comparisonsPapers that mentioned: 14
bioconductor: ViSEAGO
ViSEAGO: a Bioconductor package for clustering biological functions using Gene Ontology and semantic similarityPapers that mentioned: 14
bioconductor: BAC
Papers that mentioned: 14cran: ggsn
North Symbols and Scale Bars for Maps Created with 'ggplot2' or 'ggmap'Papers that mentioned: 14
cran: BEDASSLE
Quantifies Effects of Geo/Eco Distance on Genetic DifferentiationPapers that mentioned: 14
bioconductor: trackViewer
A R/Bioconductor package with web interface for drawing elegant interactive tracks or lollipop plot to facilitate integrated analysis of multi-omics dataPapers that mentioned: 14
cran: GLMMadaptive
Generalized Linear Mixed Models using Adaptive Gaussian QuadraturePapers that mentioned: 14
bioconductor: DropletUtils
Utilities for Handling Single-Cell Droplet DataPapers that mentioned: 14
bioconductor: SGSeq
Splice event prediction and quantification from RNA-seq dataPapers that mentioned: 14
cran: camtrapR
Camera Trap Data Management and Preparation of Occupancy and Spatial Capture-Recapture AnalysesPapers that mentioned: 14
bioconductor: RBM
RBM: a R package for microarray and RNA-Seq data analysisPapers that mentioned: 14
bioconductor: puma
Propagating Uncertainty in Microarray Analysis(including Affymetrix tranditional 3' arrays and exon arrays and Human Transcriptome Array 2.0)Papers that mentioned: 14
cran: metasens
Statistical Methods for Sensitivity Analysis in Meta-AnalysisPapers that mentioned: 14
pypi: sPyNNaker
Tools for simulating neural models generated using PyNN 0.9 on the SpiNNaker platformPapers that mentioned: 14