Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: calibrate
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/calibrate
Calibration of Scatterplot and Biplot Axes
11 versions
Latest release: over 4 years ago
16 dependent packages
6,175 downloads last month
Papers Mentioning calibrate 14
10.3389/fimmu.2021.616967
A Multi-Omics Analysis of Mucosal-Associated-Invariant T Cells Reveals Key Drivers of Distinct Modes of ActivationCited by: 12
Author(s): Kristin Schubert, Isabel Karkossa, Jana Schor, Beatrice Engelmann, Lisa Maria Steinheuer, Tony Bruns, Ulrike Rolle-Kampczyk, Jörg Hackermüller, Martin von Bergen
Software Mentions: 24
Published: over 3 years ago
10.3389/fimmu.2021.620270
Non-Genomic AhR-Signaling Modulates the Immune Response in Endotoxin-Activated Macrophages After Activation by the Environmental Stressor BaPCited by: 18
Author(s): Henning Großkopf, Katharina Walter, Isabel Karkossa, Martin von Bergen, Kristin Schubert
Software Mentions: 18
Published: over 3 years ago
10.3390/cells10092367
The Emerging Plasticizer Alternative DINCH and Its Metabolite MINCH Induce Oxidative Stress and Enhance Inflammatory Responses in Human THP-1 MacrophagesCited by: 16
Author(s): Alexandra Schaffert, Josi Arnold, Isabel Karkossa, Matthias Blüher, Martin von Bergen, Kristin Schubert
Software Mentions: 16
Published: over 3 years ago
10.1186/s12916-020-01686-8
In utero and childhood exposure to tobacco smoke and multi-layer molecular signatures in childrenCited by: 19
Author(s): Marta Vives-Usano, Carles Hernández-Ferrer, Léa Maitre, Carlos Ruiz‐Arenas, Sandra Andrušaitytė, Eva Borràs, Ángel Carracedo, Maribel Casas, Leda Chatzi, Muireann Coen, Xavier Estivill, Juan R. González, Kristine B. Gützkow, Hector C. Keun, Chung-Ho E Lau, Solène Cadiou, Johanna Lepeule, Dan Mason, Inés Quintela, Oliver Robinson, Eduard Sabidó, Gillian Santorelli, Per E. Schwarze, Alexandros P. Siskos, Rémy Slama, Marina Vafeiadi, Eulàlia Martı́, Martine Vrijheid, Mariona Bustamante
Software Mentions: 14
Published: over 4 years ago
10.1007/s00248-020-01635-1
Microbial Key Players Involved in P Turnover Differ in Artificial Soil Mixtures Depending on Clay Mineral CompositionCited by: 12
Author(s): Irina Tanuwidjaja, Cordula Vogel, Geertje Johanna Pronk, Anne Schöler, Susanne Kublik, Gisle Vestergaard, Ingrid Kögel‐Knabner, Mirna Mrkonjić Fuka, Michael Schloter, Stefanie Schulz
Software Mentions: 13
Published: about 4 years ago
10.1186/s12859-021-04028-4
scConsensus: combining supervised and unsupervised clustering for cell type identification in single-cell RNA sequencing dataCited by: 12
Author(s): Bobby Ranjan, Florian Schmidt, Wenjie Sun, Jinyu Park, Mohammad Amin Honardoost, Joanna H.J. Tan, Nirmala Arul Rayan, Shyam Prabhakar
Software Mentions: 12
Published: over 3 years ago
10.1371/journal.pone.0165881
High Interannual Variability in Connectivity and Genetic Pool of a Temperate Clingfish Matches Oceanographic Transport PredictionsCited by: 14
Author(s): Maria Klein, Sara Teixeira, Jorge Assis, Ester A. Serrão, Emanuel João Gonçalves, Rita Alexandra Borges
Software Mentions: 9
Published: about 8 years ago
10.1186/1471-2164-15-139
Unique features of the transcriptional response to model aneuploidy in human cellsCited by: 85
Author(s): Milena Dürrbaum, Anastasia Yurievna Kuznetsova, Verena Passerini, Silvia Stingele, Gabriele Stoehr, Zuzana Storchová
Software Mentions: 9
Published: almost 11 years ago
10.1128/mSystems.00815-20
Traditional Human Populations and Nonhuman Primates Show Parallel Gut Microbiome Adaptations to Analogous Ecological ConditionsCited by: 11
Author(s): Ashok Sharma, Klára J. Petrželková, Barbora Pafčo, Carolyn A. Jost Robinson, Terence Fuh, Brenda A. Wilson, Rebecca M. Stumpf, Manolito Torralba, Ran Blekhman, Bryan A. White, Karen E. Nelson, Steven R. Leigh, Andrés Gómez
Software Mentions: 9
Published: almost 4 years ago
10.1371/journal.pone.0133581
Spatial Scales of Genetic Structure in Free-Standing and Strangler Figs (Ficus, Moraceae) Inhabiting Neotropical ForestsCited by: 12
Author(s): Katrin Heer, Elisabeth K. V. Kalko, Larissa Albrecht, Roosevelt García‐Villacorta, Felix C. Staeps, Edward Allen Herre, Christopher W. Dick
Software Mentions: 8
Published: over 9 years ago
10.1074/jbc.RA119.008853
Transcriptional profiling of single fiber cells in a transgenic paradigm of an inherited childhood cataract reveals absence of molecular heterogeneityCited by: 4
Author(s): Suraj P. Bhat, Rajendra K. Gangalum, Dongjae Kim, Serghei Mangul, Raj K. Kashyap, Xinkai Zhou, David Elashoff
Software Mentions: 7
Published: over 5 years ago
10.3390/cancers12102769
Identification of Genes Whose Expression Overlaps Age Boundaries and Correlates with Risk Groups in Paediatric and Adult Acute Myeloid LeukaemiaCited by: 6
Author(s): Lindsay Davis, Ken Mills, Kim Orchard, Barbara Guinn
Software Mentions: 5
Published: about 4 years ago
10.3390/ijms21228640
Whole Transcriptome Analysis of Myeloid Dendritic Cells Reveals Distinct Genetic Regulation in Patients with AllergiesCited by: 5
Author(s): Kijeong Lee, Mi Ryung Han, Ji Yeon, Byoung Jae Kim, Tae Hoon Kim
Software Mentions: 4
Published: about 4 years ago
10.1186/s13007-016-0142-6
UV crosslinked mRNA-binding proteins captured from leaf mesophyll protoplastsCited by: 48
Author(s): Zhicheng Zhang, Kurt Boonen, Piero Ferrari, Liliane Schoofs, Ewald Janssens, Vera van Noort, Filip Rolland, Koen Geuten
Software Mentions: 3
Published: about 8 years ago