Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fimmu.2021.616967

https://doi.org/10.3389/fimmu.2021.616967

Cited by: 12
Author(s): Kristin Schubert, Isabel Karkossa, Jana Schor, Beatrice Engelmann, Lisa Maria Steinheuer, Tony Bruns, Ulrike Rolle-Kampczyk, Jörg Hackermüller, Martin von Bergen
Published: almost 3 years ago

Software Mentions 24

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DEP
Differential Enrichment analysis of Proteomics data
Papers that mentioned: 35
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
cran: calibrate
Calibration of Scatterplot and Biplot Axes
Papers that mentioned: 14
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: dendsort
Modular Leaf Ordering Methods for Dendrogram Nodes
Papers that mentioned: 6
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggsci
Scientific Journal and Sci-Fi Themed Color Palettes for 'ggplot2'
Papers that mentioned: 35
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: plyr
Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468
cran: PTXQC
Quality Report Generation for MaxQuant and mzTab Results
Papers that mentioned: 7
cran: qpcR
Modelling and Analysis of Real-Time PCR Data
Papers that mentioned: 73
cran: readxl
Read Excel Files
Papers that mentioned: 139
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
cran: splitstackshape
Stack and Reshape Datasets After Splitting Concatenated Values
Papers that mentioned: 9
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: Tmisc
Turner Miscellaneous
Papers that mentioned: 4
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
cran: xlsx
Read, Write, Format Excel 2007 and Excel 97/2000/XP/2003 Files
Papers that mentioned: 95
pypi: calibrate
Interpolate using a calibration curve
Papers that mentioned: 14
pypi: plyr
UNKNOWN
Papers that mentioned: 468
pypi: xlsx
XLSX Parsing (from js-xlsx)
Papers that mentioned: 95