cran: readxl | Projects | Ecosyste.ms: Papers

10.1186/s13073-021-00910-1

Landscape and selection of vaccine epitopes in SARS-CoV-2
Cited by: 21
Author(s): Christof C. Smith, Kelly Olsen, Kaylee M. Gentry, Maria J. Sambade, Wolfgang Beck, Jason Garness, Sarah Entwistle, Caryn Willis, Steven Vensko, Allison Woods, Misha Fini, Brandon Carpenter, Eric D. Routh, Julia Kodysh, Timothy J. O’Donnell, Carsten Haber, Kirsten Heiß, Volker Stadler, Erik Garrison, Adam Sandor, Jenny P.-Y. Ting, Jared Weiss, Krzysztof Krajewski, Oliver C. Grant, Robert J. Woods, Mark T. Heise, Benjamin G. Vincent, Alex Rubinsteyn
Software Mentions: 27
Published: over 3 years ago

10.1111/joa.13366

Selection on vocal output affects laryngeal morphology in rats
Cited by: 6
Author(s): Raffaela Lesch, Thomas Schwaha, Andrea Orozco, Margaret Shilling, Susan A. Brunelli, Myron A. Hofer, Daniel L. Bowling, Betty Zimmerberg, W. Tecumseh Fitch
Software Mentions: 25
Published: almost 4 years ago

10.1038/s41598-021-96198-7

Cross-modal auditory priors drive the perception of bistable visual stimuli with reliable differences between individuals
Cited by: 2
Author(s): Zsófia Pálffy, Kinga Farkas, Gábor Csukly, Szabolcs Kéri, Bertalan Polner
Software Mentions: 25
Published: over 3 years ago

10.3389/fimmu.2021.616967

A Multi-Omics Analysis of Mucosal-Associated-Invariant T Cells Reveals Key Drivers of Distinct Modes of Activation
Cited by: 12
Author(s): Kristin Schubert, Isabel Karkossa, Jana Schor, Beatrice Engelmann, Lisa Maria Steinheuer, Tony Bruns, Ulrike Rolle-Kampczyk, Jörg Hackermüller, Martin von Bergen
Software Mentions: 24
Published: over 3 years ago

10.18632/aging.203108

Cognitive dedifferentiation as a function of cognitive impairment in the ADNI and MemClin cohorts
Cited by: 2
Author(s): John Wallert, Anna Rennie, Daniel Ferreira, J‐Sebastian Muehlboeck, Lars‐Olof Wahlund, Eric Westman, Urban Ekman
Software Mentions: 20
Published: over 3 years ago

10.3390/v12101142

A Diverse Virome of Leafroll-Infected Grapevine Unveiled by dsRNA Sequencing
Cited by: 24
Author(s): Mamadou L. Fall, De-Xiang Xu, Pierre Lemoyne, Issam Moussa, Carole Beaulieu, Odile Carisse
Software Mentions: 19
Published: about 4 years ago

10.1098/rsos.202050

Experiments confirm a dispersive phenotype associated with a natural gene drive system
Cited by: 7
Author(s): Jan‐Niklas Runge, Anna K. Lindholm
Software Mentions: 19
Published: over 3 years ago

10.3389/fimmu.2021.620270

Non-Genomic AhR-Signaling Modulates the Immune Response in Endotoxin-Activated Macrophages After Activation by the Environmental Stressor BaP
Cited by: 18
Author(s): Henning Großkopf, Katharina Walter, Isabel Karkossa, Martin von Bergen, Kristin Schubert
Software Mentions: 18
Published: almost 4 years ago

10.1371/journal.pbio.3001296

Tapping into non-English-language science for the conservation of global biodiversity
Cited by: 79
Author(s): Tatsuya Amano, Violeta Berdejo‐Espinola, Alec P. Christie, Kate Willott, Munemitsu Akasaka, András Báldi, Anna Berthinussen, Sandro Bertolino, Andrew J. Bladon, Min Chen, Chang Yong Choi, Magda Bou Dagher Kharrat, Luís Guilherme de Oliveira, Perla Farhat, Marina Golivets, Nataly Hidalgo Aranzamendi, Kerstin Jantke, Joanna Kajzer‐Bonk, M. Çisel Kemahlı Aytekin, Igor Khorozyan, Kensuke Kito, Ko Konno, Da Li Lin, Nick A. Littlewood, Yang Liu, Yifan Liu, Matthias Claudio Loretto, Valentina Marconi, Philip A. Martin, William H. Morgan, Juan Pablo Narváez-Gómez, Pablo José Negret, Elham Nourani, José Manuel Ochoa Quintero, Nancy Ockendon, Rachel Rui Ying Oh, Silviu O. Petrovan, Ana Cláudia Piovezan-Borges, Ingrid L. Pollet, Danielle Leal Ramos, Ana L. Reboredo Segovia, A. Nayelli Rivera‐Villanueva, Ricardo Rocha, Marie Morgane Rouyer, Katherine A. Sainsbury, Richard Schuster, Dominik Schwab, Çaǧan H. Şekercioǧlu, Hae Min Seo, Gorm E. Shackelford, Yushin Shinoda, Rebecca K. Smith, Shan Dar Tao, Ming-shan Tsai, Elizabeth Tyler, Flóra Vajna, José O. Valdebenito, Svetlana Vozykova, Paweł Waryszak, Veronica Zamora‐Gutiérrez, Rafael Dudeque Zenni, Wenjun Zhou, William J. Sutherland
Software Mentions: 18
Published: about 3 years ago

10.3389/fimmu.2021.700501

Interferon-γ-Producing CD4+ T Cells Drive Monocyte Activation in the Bone Marrow During Experimental Leishmania donovani Infection
Cited by: 6
Author(s): Audrey Romano, Najmeeyah Brown, Helen Ashwin, Johannes S. P. Doehl, Jonathan Hamp, Mohamed Osman, Nidhi Sharma Dey, Gulab Fatima Rani, Tiago Luiz Ferreira, Paul M. Kaye
Software Mentions: 18
Published: over 3 years ago

10.1073/pnas.2006024117

Diel variability of methane emissions from lakes
Cited by: 46
Author(s): Anna Sieczko, Nguyen Thanh Duc, Jonathan Schenk, Gustav Pajala, David Rudberg, Henrique O. Sawakuchi, David Bastviken
Software Mentions: 17
Published: over 4 years ago

10.1371/journal.pone.0200653

Cryopreservation of human mucosal tissues
Cited by: 13
Author(s): Sean M. Hughes, April L. Ferre, Sarah E Yandura, Cory Shetler, Chris A. R. Baker, Fernanda Calienes, Claire Levy, Rena D. Astronomo, Zhiquan Shu, Gretchen M. Lentz, Michael Fialkow, Anna C. Kirby, M. Juliana McElrath, Elizabeth Sinclair, Lisa C. Rohan, Peter L. Anderson, Barbara L. Shacklett, Charlene S. Dezzutti, Dayong Gao, Florian Hladik
Software Mentions: 17
Published: over 6 years ago

10.3389/fimmu.2020.565730

Class I HLA Allele Predicted Restricted Antigenic Coverages for Spike and Nucleocapsid Proteins Are Associated With Deaths Related to COVID-19
Cited by: 22
Author(s): Marco Antônio M. Pretti, Rômulo Gonçalves Galvani, Gustavo Fioravanti Vieira, Adriana Bonomo, Martín Bonamino, Mariana Boroni
Software Mentions: 17
Published: about 4 years ago

10.3390/cells10092367

The Emerging Plasticizer Alternative DINCH and Its Metabolite MINCH Induce Oxidative Stress and Enhance Inflammatory Responses in Human THP-1 Macrophages
Cited by: 16
Author(s): Alexandra Schaffert, Josi Arnold, Isabel Karkossa, Matthias Blüher, Martin von Bergen, Kristin Schubert
Software Mentions: 16
Published: over 3 years ago

10.1038/s41419-021-03909-z

Diagnostic and prognostic potential of the proteomic profiling of serum-derived extracellular vesicles in prostate cancer
Cited by: 14
Author(s): Michele Signore, Romina Alfonsi, Giulia Federici, Simona Nanni, Antonio Addario, Lucia Bertuccini, Aurora Aiello, Anna Pace, Isabella Sperduti, Giovanni Muto, Alessandro Giacobbe, Devis Collura, Lidia Brunetto, Giuseppe Simone, Manuela Costantini, Lucio Crinò, Stefania Rossi, Claudio Tabolacci, Marco Diociaiuti, Tania Merlino, Michele Gallucci, Steno Sentinelli, Rocco Papalia, Ruggero De Maria, Dèsirèe Bonci
Software Mentions: 16
Published: over 3 years ago

10.1002/ece3.6959

In the shadows of snow leopards and the Himalayas: density and habitat selection of blue sheep in Manang, Nepal
Cited by: 11
Author(s): Marc Filla, Rinzin Phunjok Lama, Tashi Rapte Ghale, Johannes Signer, Tim Filla, Raja Ram Aryal, Marco Heurich, Matthias Waltert, Niko Balkenhol, Igor Khorozyan
Software Mentions: 16
Published: about 4 years ago

10.1038/s41597-019-0344-7

A global database for metacommunity ecology, integrating species, traits, environment and space
Cited by: 21
Author(s): Aliénor Jeliazkov, Darko Mijatovic, Stéphane Chantepie, Nigel R. Andrew, Raphaël Arlettaz, Luc Barbaro, Nadia Barsoum, Alena Sucháčková Bartoňová, Elena Belskaya, Núria Bonada, Anik Brind’Amour, Rodrigo Assis de Carvalho, Helena Castro, Damian Chmura, Philippe Choler, Karen M. Chong‐Seng, Daniel F. R. Cleary, A. Cormont, William K. Cornwell, Ramiro de Campos, Nicole J. de Voogd, Sylvain Dolédec, Joshua Adam Drew, Frank Dziock, Anthony S. Eallonardo, Melanie J. Edgar, Fábio Z. Farneda, Domingo Flores Hernández, Cédric Frenette‐Dussault, Guillaume Fried, Belinda Gallardo, Heloise Gibb, Thiago Gonçalves‐Souza, Janet Higuti, Jean‐Yves Humbert, Boris R. Krasnov, Eric Le Saux, Zoë Lindo, Adrià López‐Baucells, E. Cronin Lowe, Bryndís Marteinsdóttir, Koenraad Martens, Peter J. Meffert, Andrés Mellado‐Díaz, Myles H. M. Menz, Christoph F. J. Meyer, Julia Ramos-Miranda, David Mouillot, Alessandro Ossola, Robin J. Pakeman, Sandrine Pavoine, Burak K. Pekin, Joan Pino, Arnaud Pocheville, Francesco Pomati, Peter Poschlod, Honor C. Prentice, Oliver Purschke, Valérie Raevel, Triin Reitalu, Willem Renema, Ignacio Ribera, Natalie Robinson, Bjorn J. M. Robroek, Ricardo Rocha, Sen-Her Shieh, Rebecca Spake, Monika Staniaszek‐Kik, Michał Stanko, Francisco Leonardo Tejerina‐Garro, Cajo J. F. ter Braak, Mark C. Urban, Roel van Klink, Sébastien Villéger, R.J.M. Wegman, Martin J. Westgate, Jonas Wolff, Jan Żarnowiec, М. П. Золотарев, Jonathan M. Chase
Software Mentions: 16
Published: almost 5 years ago

10.3389/fmicb.2020.580691

No Assembly Required: Using BTyper3 to Assess the Congruency of a Proposed Taxonomic Framework for the Bacillus cereus Group With Historical Typing Methods
Cited by: 20
Author(s): Laura M. Carroll, Rachel A. Cheng, Jasna Kovač
Software Mentions: 15
Published: over 4 years ago

10.1038/s41598-020-72571-w

Persistent fire foci in all biomes undermine the Paris Agreement in Brazil
Cited by: 51
Author(s): Carlos Antônio da Silva, Paulo Eduardo Teodoro, Rafael Coll Delgado, Larissa Pereira Ribeiro Teodoro, Mendelson Lima, Ariane de Andréa Pantaleão, Fábio Henrique Rojo Baio, Gileno Brito de Azevedo, Glauce Táıs de Oliveira Sousa Azevedo, Guilherme Fernando Capristo-Silva, Damien Arvor, Cassiele Uliana Facco
Software Mentions: 15
Published: about 4 years ago

10.3390/plants10040615

Polyphenol Diversity and Antioxidant Activity of European Cistus creticus L. (Cistaceae) Compared to Six Further, Partly Sympatric Cistus Species
Cited by: 11
Author(s): Brigitte Lukas, Laura Bragagna, Katharina Starzyk, Klaudia Labedz, Klaus Stolze, Johannes Novak
Software Mentions: 14
Published: almost 4 years ago

10.3390/ijms20174162

SILAC-Based Quantification of TGFBR2-Regulated Protein Expression in Extracellular Vesicles of Microsatellite Unstable Colorectal Cancers
Cited by: 13
Author(s): Fabia Fricke, Malwina Michalak, Uwe Warnken, Ingrid Haußer, Martina Schnölzer, Jürgen Kopitz, Johannes Gebert
Software Mentions: 14
Published: over 5 years ago

10.1093/gigascience/giab039

A large-scale metagenomic survey dataset of the post-weaning piglet gut lumen
Cited by: 8
Author(s): Daniela Gaio, Matthew Z. DeMaere, Kay Anantanawat, G. J. Eamens, Mengmeng Liu, Tiziana Zingali, Linda Falconer, Toni A. Chapman, Steven P. Djordjevic, Aaron E. Darling
Software Mentions: 14
Published: over 3 years ago

10.1371/journal.pone.0218310

Evaluating health facility access using Bayesian spatial models and location analysis methods
Cited by: 8
Author(s): Nicholas Tierney, Antonietta Mira, H Reinhold, Giuseppe Arbia, Samuel Clifford, Angelo Auricchio, Tiziano Moccetti, Stefano Peluso, Kerrie Mengersen
Software Mentions: 14
Published: over 5 years ago

10.1371/journal.pone.0249268

Outdoor cycling activity affected by COVID-19 related epidemic-control-decisions
Cited by: 38
Author(s): Anne-Maria Schweizer, Anna Leiderer, Veronika Mitterwallner, Anna Walentowitz, Gregor Mathes, Manuel J. Steinbauer
Software Mentions: 14
Published: over 3 years ago

10.1371/journal.pbio.3000581

PlotTwist: A web app for plotting and annotating continuous data
Cited by: 43
Author(s): Joachim Goedhart
Software Mentions: 14
Published: almost 5 years ago

10.7717/peerj.4729

Effects of nettle slurry (Urtica dioica L.) used as foliar fertilizer on potato (Solanum tuberosum L.) yield and plant growth
Cited by: 9
Author(s): Alfonso Garmendia, María Dolores Raigón, Olmo Marques, M. Ferriol, Jorge Royo, Hugo Merlé
Software Mentions: 14
Published: over 6 years ago

10.3390/v13061184

Age and Infectious Dose Significantly Affect Disease Progression after RHDV2 Infection in Naïve Domestic Rabbits
Cited by: 13
Author(s): Robyn N. Hall, Tegan King, Tiffany W. O’Connor, Andrew J. Read, Jane Arrow, Katherine Trought, Janine A. Duckworth, M. Treuting Piper, Tanja Strive
Software Mentions: 13
Published: over 3 years ago

10.1371/journal.pcbi.1008880

Orchestrating privacy-protected big data analyses of data from different resources with R and DataSHIELD
Cited by: 20
Author(s): Yannick Marcon, Tom Bishop, Demetris Avraam, Xavier Escribà-Montagut, Patricia Ryser-Welch, SM Wheater, Paul R. Burton, Juan R. González
Software Mentions: 13
Published: almost 4 years ago

10.1038/s41598-020-73812-8

Synbiotic feed supplementation significantly improves lipid utilization and shows discrete effects on disease resistance in rainbow trout (Oncorhynchus mykiss)
Cited by: 10
Author(s): Kasper Rømer Villumsen, Maki Ohtani, Torunn Forberg, Elisabeth Aasum, John Tinsley, Anders Miki Bojesen
Software Mentions: 12
Published: about 4 years ago

10.4269/ajtmh.20-0757

A Computational Modeling Study of COVID-19 in Bangladesh
Cited by: 7
Author(s): Irtesam Mahmud Khan, Ubydul Haque, Samiha Kaisar, Md. Saidur Rahman
Software Mentions: 12
Published: almost 4 years ago

10.3389/fpsyg.2020.575170

Do Disadvantageous Social Contexts Influence Food Choice? Evidence From Three Laboratory Experiments
Cited by: 0
Author(s): Qëndresa Rramani, Holger Gerhardt, Xenia Grote, Weihua Zhao, Johannes Schultz, Bernd Weber
Software Mentions: 12
Published: about 4 years ago

10.1128/mSystems.00068-21

Diverse Viruses in Deep-Sea Hydrothermal Vent Fluids Have Restricted Dispersal across Ocean Basins
Cited by: 14
Author(s): Elaina Thomas, R. Anderson, Viola Li, L Jenni Rogan, Julie A. Huber
Software Mentions: 11
Published: over 3 years ago

10.7717/peerj.5209

Distribution and ecological segregation on regional and microgeographic scales of the diploidCentaurea asperaL., the tetraploidC. seridisL., and their triploid hybrids (Compositae)
Cited by: 5
Author(s): Alfonso Garmendia, Hugo Merlé, Pablo L. Ruiz, M. Ferriol
Software Mentions: 11
Published: over 6 years ago

10.1007/s00394-020-02351-9

Gluten intake and metabolic health: conflicting findings from the UK Biobank
Cited by: 13
Author(s): Inken Behrendt, Mathias Faßhauer, Gerrit Eichner
Software Mentions: 11
Published: over 4 years ago

10.3389/fpsyg.2021.545268

Beholden: The Emotional Effects of Having Eye Contact While Breaking Social Norms
Cited by: 2
Author(s): Ranjit K. Singh, Birgit J. Voggeser, Anja S. Göritz
Software Mentions: 11
Published: over 3 years ago

10.3389/fpsyg.2021.638659

Syllable Complexity and Morphological Synthesis: A Well-Motivated Positive Complexity Correlation Across Subdomains
Cited by: 2
Author(s): Shelece Easterday, Matthew Stave, Marc Allassonnière-Tang, Frank Seifart
Software Mentions: 11
Published: almost 4 years ago

10.1038/s41598-019-42533-y

MeshMonk: Open-source large-scale intensive 3D phenotyping
Cited by: 78
Author(s): Julie D. White, Alejandra Ortega-Castrillón, Harold Matthews, Arslan Zaidi, Omid Ekrami, Jonatan Snyders, Yi Fan, Tony Penington, Stefan Van Dongen, Mark D. Shriver, Peter Claes
Software Mentions: 10
Published: over 5 years ago

10.1093/aje/kwaa127

Conditional Cash Transfer Program and Leprosy Incidence: Analysis of 12.9 Million Families From the 100 Million Brazilian Cohort
Cited by: 15
Author(s): Júlia Moreira Pescarini, Elizabeth Williamson, Maria Yury Ichihara, Rosemeire Leovigildo Fiaccone, Laura Forastiere, Anna Ramond, Joilda Silva Nery, Maria Lúcia Fernandes Penna, Agostino Strina, Sandra Reis, Liam Smeeth, Laura C. Rodrigues, Elizabeth B Brickley, Gerson Oliveira Penna, Marcos Barreto
Software Mentions: 10
Published: over 4 years ago

10.1017/S0950268820000746

Risk of bacteremia in patients presenting with shaking chills and vomiting - a prospective cohort study
Cited by: 2
Author(s): Madlene Holmqvist, Malin Inghammar, Lisa I. Påhlman, John H. Boyd, Per Åkesson, Adam Linder, Fredrik Kahn
Software Mentions: 10
Published: almost 5 years ago

10.1093/database/bay033

The tragedy of the biodiversity data commons: a data impediment creeping nigher?
Cited by: 11
Author(s): Nora Escribano, David Galicia, Arturo H. Ariño
Software Mentions: 10
Published: almost 7 years ago

10.1371/journal.pbio.3001053

Identification of 3′ UTR motifs required for mRNA localization to myelin sheaths in vivo
Cited by: 13
Author(s): Katie M. Yergert, Caleb A. Doll, Rebecca O’Rouke, Jacob H. Hines, Bruce Appel
Software Mentions: 10
Published: almost 4 years ago

10.3389/fmed.2020.00247

Growth Rate and Acceleration Analysis of the COVID-19 Pandemic Reveals the Effect of Public Health Measures in Real Time
Cited by: 34
Author(s): Yuri Tani Utsunomiya, Adam Taiti Harth Utsunomiya, Rafaela Beatriz Pintor Torrecilha, Silvana de Cássia Paulan, Marco Milanesi, José Fernando Garcia
Software Mentions: 10
Published: over 4 years ago

10.1186/s13071-020-04461-z

Oviposition of Aedes japonicus japonicus (Diptera: Culicidae) and associated native species in relation to season, temperature and land use in western Germany
Cited by: 12
Author(s): Linus Früh, Helge Kampen, Marcel B. Koban, Nadja Pernat, Günter A. Schaub, Doreen Werner
Software Mentions: 10
Published: about 4 years ago

10.3390/nu13082666

Improvement of Cutaneous Wound Healing via Topical Application of Heat-Killed Lactococcus chungangensis CAU 1447 on Diabetic Mice
Cited by: 20
Author(s): YoHan Nam, Jonghwa Kim, Jihye Baek, Wonyong Kim
Software Mentions: 9
Published: over 3 years ago

10.3390/ijms22073411

Insights of Phenolic Pathway in Fruits: Transcriptional and Metabolic Profiling in Apricot (Prunus armeniaca)
Cited by: 6
Author(s): Helena Gómez-Martínez, Francisco Gil-Muñoz, Almudena Bermejo, Elena Zuriaga, M. L. Badenes
Software Mentions: 9
Published: almost 4 years ago

10.2196/10076

Key Elements of mHealth Interventions to Successfully Increase Physical Activity: Meta-Regression
Cited by: 56
Author(s): Lisa V. Eckerstorfer, Norbert K. Tanzer, Claudia Vogrincic-Haselbacher, Gayannée Kedia, Hilmar Brohmer, Isabelle Dinslaken, Katja Corcoran
Software Mentions: 9
Published: about 6 years ago

10.3390/metabo11040211

gcProfileMakeR: An R Package for Automatic Classification of Constitutive and Non-Constitutive Metabolites
Cited by: 3
Author(s): Fernando Pérez-Sánz, Victoria Ruiz-Hernández, Marta I. Terry, Sara Arce-Gallego, Julia Weiß, Pedro J. Navarro, Marcos Egea‐Cortines
Software Mentions: 9
Published: almost 4 years ago

10.3390/ijerph17197127

Relationship between Quality of Life and the Complexity of Default Mode Network in Resting State Functional Magnetic Resonance Image in Down Syndrome
Cited by: 6
Author(s): María Carbó‐Carreté, Cristina Cañete‐Massé, María Dolores Figueroa-Jiménez, Maribel Peró‐Cebollero, Joan Guàrdia‐Olmos
Software Mentions: 9
Published: over 4 years ago

10.1371/journal.pbio.3000202

PlotsOfData—A web app for visualizing data together with their summaries
Cited by: 394
Author(s): Marten Postma, Joachim Goedhart
Software Mentions: 9
Published: almost 6 years ago

10.1038/s41598-020-76603-3

VolcaNoseR is a web app for creating, exploring, labeling and sharing volcano plots
Cited by: 230
Author(s): Joachim Goedhart, Martijn S. Luijsterburg
Software Mentions: 9
Published: about 4 years ago

10.1177/1179546820951793

Carotid Plaque Morphology is Similar in Patients with Reduced and Normal Renal Function
Cited by: 1
Author(s): Caroline Heijl, Fredrik Kahn, Andreas Edsfeldt, Christoffer Tengryd, Jan Nilsson, Isabel Gonçalves
Software Mentions: 9
Published: almost 5 years ago

10.3390/v11100910

Host Range of Bacteriophages Against a World-Wide Collection of Erwinia amylovora Determined Using a Quantitative PCR Assay
Cited by: 14
Author(s): Steven Gayder, Michael Parcey, Alan J. Castle, A. M. Svircev
Software Mentions: 9
Published: about 5 years ago

10.1016/j.dib.2020.106651

Impact of malnutrition on survival in adult patients after elective cardiac surgery: Long-term follow up data
Cited by: 0
Author(s): Sergey Efremov, Tatiana Ionova, Tatiana Nikitina, Pavel E. Vedernikov, Timur Dzhumatov, Timofey S. Ovchinnikov, Abduvahhob A. Rashidov, Alexandr E Khomenko, Christian Stoppe, Daren K. Heyland, В. В. Ломиворотов
Software Mentions: 9
Published: almost 4 years ago

10.3390/ijms22136855

Concentrated Raw Fibers Enhance the Fiber-Degrading Capacity of a Synthetic Human Gut Microbiome
Cited by: 3
Author(s): Alex Steimle, Mareike Neumann, Erica T. Grant, Jonathan D. Turner, Mahesh S. Desai
Software Mentions: 9
Published: over 3 years ago

10.7554/eLife.60122

Quantifying antibody kinetics and RNA detection during early-phase SARS-CoV-2 infection by time since symptom onset
Cited by: 68
Author(s): Benny Borremans, Amandine Gamble, Katherine C. Prager, Sarah K Helman, Abby M. McClain, Caitlin Cox, Van Savage, James O. Lloyd‐Smith
Software Mentions: 8
Published: over 4 years ago

10.1080/16549716.2018.1440783

Health Equity Assessment Toolkit Plus (HEAT Plus): software for exploring and comparing health inequalities using uploaded datasets
Cited by: 42
Author(s): Ahmad Reza Hosseinpoor, Anne Schlotheuber, Devaki Nambiar, Zev Ross
Software Mentions: 8
Published: over 6 years ago

10.1038/s41598-021-83888-5

A novel approach for microRNA in situ hybridization using locked nucleic acid probes
Cited by: 6
Author(s): Isabella Worlewenut Paulsen, Micheal Bzorek, John Elmerdahl Olsen, Birgitte Grum-Schwensen, Jesper T. Troelsen, Ole Birger Pedersen
Software Mentions: 8
Published: almost 4 years ago

10.1038/s41598-019-48425-5

An empirical assessment of research practices across 163 clinical trials of tumor-bearing companion dogs
Cited by: 3
Author(s): Yuan Tan, Ryan J. Crowley, John P. A. Ioannidis
Software Mentions: 8
Published: over 5 years ago

10.3390/antiox10060864

Blood Plasma Quality Control by Plasma Glutathione Status
Cited by: 2
Author(s): Tamara Tomin, Natalie Bordag, Elmar Zügner, A Al-Baghdadi, Maximilian Schinagl, Ruth Birner‐Gruenberger, Matthias Schittmayer
Software Mentions: 8
Published: over 3 years ago

10.3389/fcvm.2019.00167

SS-31 Peptide Reverses the Mitochondrial Fragmentation Present in Fibroblasts From Patients With DCMA, a Mitochondrial Cardiomyopathy
Cited by: 21
Author(s): Pranav Machiraju, Xuemei Wang, Rasha Sabouny, Joshua Huang, Tian Zhao, Fatima Iqbal, Melissa A. King, Dimple Prasher, A Lodha, Nerea Jimenez-Tellez, Amir Ravandi, Bob Argiropoulos, David S. Sinasac, Aneal Khan, Timothy E. Shutt, Steven C. Greenway
Software Mentions: 8
Published: about 5 years ago

10.3390/ani10061047

A Systematic Review Comparing Experimental Design of Animal and Human Methotrexate Efficacy Studies for Rheumatoid Arthritis: Lessons for the Translational Value of Animal Studies
Cited by: 8
Author(s): Cathalijn Leenaars, Frans Stafleu, David De Jong, Maikel van Berlo, Tijmen Geurts, Tineke Coenen-de Roo, Jan–Bas Prins, Rosalie W.M. Kempkes, Janneke Elzinga, André Bleich, Rob de Vries, F.L.B. Meijboom, Merel Ritskes‐Hoitinga
Software Mentions: 8
Published: over 4 years ago

10.3390/ijerph17165782

Assessing the Psychometric Properties of the Internet Addiction Test in Peruvian University Students
Cited by: 7
Author(s): Arnold Alejandro Tafur-Mendoza, Julio César Acosta Prado, Rodrigo Arturo Zárate-Torres, Duván Emilio Ramírez-Ospina
Software Mentions: 8
Published: over 4 years ago

10.1038/s41598-018-23630-w

The Anti-Cancer Multikinase Inhibitor Sorafenib Impairs Cardiac Contractility by Reducing Phospholamban Phosphorylation and Sarcoplasmic Calcium Transients
Cited by: 21
Author(s): Christopher Schneider, Markus Wallner, Ewald Kolesnik, Viktoria Herbst, Heinrich Mächler, Martin Pichler, Dirk von Lewinski, Simon Sedej, Peter P. Rainer
Software Mentions: 8
Published: almost 7 years ago

10.3390/jfmk5040072

Body Composition Changes over Multiple Academic Years in Female Collegiate Soccer Players
Cited by: 0
Author(s): Austin Katona, Caroline Riewe, Angela Bruzina, Nicholas J. Ollberding, Mary Ankrom, Jon G. Divine, Robert E. Mangine, Abigail Peairs
Software Mentions: 7
Published: over 4 years ago

10.3390/jcm8081128

NEWS2 is Superior to qSOFA in Detecting Sepsis with Organ Dysfunction in the Emergency Department
Cited by: 60
Author(s): Lisa Mellhammar, Adam Linder, Jonas Tverring, Bértil Christensson, John H. Boyd, Parham Sendi, Per Åkesson, Fredrik Kahn
Software Mentions: 7
Published: over 5 years ago

10.3390/nu12102934

Dietary Sodium Intake and Risk of Cardiovascular Disease: A Systematic Review and Dose-Response Meta-Analysis
Cited by: 64
Author(s): Yijie Wang, Tzu‐Lin Yeh, Ming‐Chieh Shih, Yu‐Kang Tu, Kuo–Liong Chien
Software Mentions: 7
Published: over 4 years ago

10.3389/fnagi.2019.00203

Revisiting the MotionWatch8©: Calibrating Cut-Points for Measuring Physical Activity and Sedentary Behavior Among Adults With Stroke
Cited by: 6
Author(s): Ryan S. Falck, John R. Best, Michael C. R. Li, Janice J. Eng, Teresa Liu-Ambrose
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0243672

Characterisation and chemometric evaluation of 17 elements in ten seaweed species from Greenland
Cited by: 11
Author(s): Katharina Kreissig, Lisbeth Truelstrup Hansen, Pernille Erland Jensen, Susse Wegeberg, Ole Geertz‐Hansen, Jens Jørgen Sloth
Software Mentions: 7
Published: almost 4 years ago

10.1016/j.mex.2019.05.021

Inaccessible rocky cliffs: An optimized method for plant data collection in extreme environments
Cited by: 0
Author(s): Estrella Alfaro-Saíz, Víctor Granda, Alfonso Insuasty Rodríguez, Raquel Alonso Redondo, M. García-González
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.ppat.1008864

Using Plasmodium knowlesi as a model for screening Plasmodium vivax blood-stage malaria vaccine targets reveals new candidates
Cited by: 14
Author(s): Duncan Ndungu Ndegwa, Prasun Kundu, Jessica B. Hostetler, Alejandro Marín-Menéndez, Theo Sanderson, Kioko Mwikali, Lisa Verzier, Rachael Coyle, Sophie H. Adjalley, Julian C. Rayner
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0199648

Outcomes of early NIH-funded investigators: Experience of the National Institute of Allergy and Infectious Diseases
Cited by: 10
Author(s): Patricia A. Haggerty, Matthew J. Fenton
Software Mentions: 7
Published: over 6 years ago

10.3390/ijms22189979

A Novel UPLC-MS/MS Method Identifies Organ-Specific Dipeptide Profiles
Cited by: 5
Author(s): Elena Heidenreich, Tilman Pfeffer, Tamara Kracke, Nils Mechtel, Peter P. Nawroth, Georg F. Hoffmann, Claus Peter Schmitt, Rüdiger Hell, Gernot Poschet, Verena Peters
Software Mentions: 7
Published: over 3 years ago

10.3390/cancers13174476

Combining APR-246 and HDAC-Inhibitors: A Novel Targeted Treatment Option for Neuroblastoma
Cited by: 8
Author(s): Michael Müller, Lisa Rösch, Sara Najafi, Charlotte Gatzweiler, Johannes Ridinger, Xenia F Gerloff, David Jones, Jochen Baßler, Sina Kreth, Sabine Stainczyk, Karen Frese, Benjamin Meder, Frank Westermann, Till Milde, Heike Peterziel, Olaf Witt, Ina Oehme
Software Mentions: 7
Published: over 3 years ago

10.1038/s41598-021-96403-7

Exercise interventions can improve muscle strength, endurance, and electrical activity of lumbar extensors in individuals with non-specific low back pain: a systematic review with meta-analysis
Cited by: 3
Author(s): Sacha Clael, Lorrane Freitas Campos, Karina Lisboa Correia, Joana Marcela Sales de Lucena, Paulo Gentil, João Luíz Quagliotti Durigan, Alexandre Lima de Araújo Ribeiro, Wagner Rodrigues Martins
Software Mentions: 7
Published: over 3 years ago

10.3390/ani11030674

Assessment of Performance and Some Welfare Indicators of Cows in Vietnamese Smallholder Dairy Farms
Cited by: 5
Author(s): Nguyen N. Bang, Nguyen V. Chanh, Nguyễn Xuân Trạch, Duong Nguyen Khang, Ben J. Hayes, J. B. Gaughan, Russell E. Lyons, Nguyễn Thanh Hải, David McNeill
Software Mentions: 7
Published: almost 4 years ago

10.1186/s40851-019-0136-0

A new calmanostracan crustacean species from the Cretaceous Yixian Formation and a simple approach for differentiating fossil tadpole shrimps and their relatives
Cited by: 3
Author(s): Philipp Wagner, Joachim T. Haug, Carolin Haug
Software Mentions: 7
Published: over 5 years ago

10.1002/gepi.22205

Imputed gene associations identify replicable trans‐acting genes enriched in transcription pathways and complex traits
Cited by: 13
Author(s): Heather E. Wheeler, Sally Ploch, Alvaro N. Barbeira, Rodrigo Bonazzola, Angela Andaleon, Alireza Fotuhi Siahpirani, Ashis Saha, Alexis Battle, Sushmita Roy, Hae Kyung Im
Software Mentions: 7
Published: over 5 years ago

10.3390/biom11050704

Into the Deep: New Data on the Lipid and Fatty Acid Profile of Redfish Sebastes mentella Inhabiting Different Depths in the Irminger Sea
Cited by: 12
Author(s): Viktor P. Voronin, Н. Н. Немова, Т. Р. Руоколайнен, Д. В. Артеменков, Aleksei Y. Rolskii, А. М. Орлов, С. А. Мурзина
Software Mentions: 7
Published: over 3 years ago

10.1098/rsos.170051

Contradicting habitat type-extinction risk relationships between living and fossil amphibians
Cited by: 3
Author(s): Melanie Tietje, Mark‐Oliver Rödel
Software Mentions: 7
Published: over 7 years ago

10.3389/fpls.2021.695415

Leaf Epidermis: The Ambiguous Symplastic Domain
Cited by: 0
Author(s): Olga V. Voitsekhovskaja, Anna N. Melnikova, Kirill N. Demchenko, Alexandra N. Ivanova, V. A. Dmitrieva, Anastasiia I. Maksimova, Gertrud Lohaus, A. D. Tomos, E.V. Tyutereva, Olga Koroleva
Software Mentions: 7
Published: over 3 years ago

10.3390/brainsci11030323

Changes in Representation of Thalamic Projection Neurons within Prefrontal-Thalamic-Hippocampal Circuitry in a Rat Model of Third Trimester Binge Drinking
Cited by: 1
Author(s): Zachary H Gursky, Anna Y. Klintsova
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pntd.0008487

Non-invasive monitoring of drug action: A new live in vitro assay design for Chagas’ disease drug discovery
Cited by: 5
Author(s): Anna Fesser, Olivier Braissant, F.J. Olmo, John M. Kelly, Pascal Mäser, Marcel Kaiser
Software Mentions: 6
Published: over 4 years ago

10.3390/cancers13102496

Differential Prognosis and Response of Denovo vs. Secondary Muscle-Invasive Bladder Cancer: An Updated Systematic Review and Meta-Analysis
Cited by: 8
Author(s): Matthias Pones, David D’Andrea, Keiichiro Mori, Mohammad Abufraj, Marco Moschini, Éva Compérat, Shahrokh F. Shariat
Software Mentions: 6
Published: over 3 years ago

10.1016/j.dib.2019.104444

Data-based investigation on the performance of an independent gas turbine for electricity generation using real power measurements and other closely related parameters
Cited by: 1
Author(s): Ayodele Benjamin Esan, Vincent Ebhohime Ehiaguina, C. O. A. Awosope, Lanre Olatomiwa, Dickson Egbune
Software Mentions: 6
Published: about 5 years ago

10.1016/j.dib.2020.106424

An exploratory assessment of a multidimensional healthcare and economic data on COVID-19 in Nigeria
Cited by: 7
Author(s): Ezekiel Ogundepo, Joseph Bamidele Awotunde, Olubayo Adekanmbi, Olalekan Akinsande, Oluwatobi Banjo, Emeka Ogbuju, Francisca Oladipo, Olawale Victor Abimbola, Ehizokhale Oseghale, Oluwatobi Babajide
Software Mentions: 6
Published: about 4 years ago

10.1186/s13068-020-01855-0

Lignin intermediates lead to phenyl acid formation and microbial community shifts in meso- and thermophilic batch reactors
Cited by: 7
Author(s): Eva Maria Prem, Mira Mutschlechner, Blaž Stres, Paul Illmer, Andreas Otto Wagner
Software Mentions: 6
Published: almost 4 years ago

10.1186/s13062-017-0193-2

On the global CRISPR array behavior in class I systems
Cited by: 11
Author(s): Alice Toms, Rodolphe Barrangou
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.ppat.1007273

Trichuris muris whey acidic protein induces type 2 protective immunity against whipworm
Cited by: 18
Author(s): Neima Briggs, Junfei Wei, Leroy Versteeg, Bin Zhan, Brian Keegan, Ashish Damania, Jeroen Pollet, Kelly S. Hayes, Coreen M. Beaumier, Christopher A. Seid, Jamie Leong, Richard K. Grencis, María Elena Bottazzi, K. Jagannadha Sastry, Peter J. Hotez
Software Mentions: 6
Published: over 6 years ago

10.3934/publichealth.2021034

On the relationship between COVID-19 reported fatalities early in the pandemic and national socio-economic status predating the pandemic
Cited by: 2
Author(s): Kathleen L. Foster, Alessandro Selvitella
Software Mentions: 6
Published: almost 4 years ago

10.1186/s12889-021-11761-1

Modeling the effect of age on quantiles of the incubation period distribution of COVID-19
Cited by: 0
Author(s): Xiaohui Liu, Lei Wang, Xiansi Ma, Jiewen Wang, Liwen Wu
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pntd.0008699

Development of a multiplex microsphere immunoassay for the detection of antibodies against highly pathogenic viruses in human and animal serum samples
Cited by: 2
Author(s): Rebecca Surtees, Daniel Stern, Katharina Ahrens, Nicole Kromarek, Angelika Lander, Petra Kreher, Sabrina Weiß, Roger Hewson, Emma K. Punch, John N. Barr, Peter T. Witkowski, Emmanuel Couacy‐Hymann, Andrea Marzi, Brigitte G. Dorner, Andreas Kurth
Software Mentions: 5
Published: about 4 years ago

10.3390/cells10081923

Overexpression and Activation of αvβ3 Integrin Differentially Affects TGFβ2 Signaling in Human Trabecular Meshwork Cells
Cited by: 11
Author(s): Mark S. Filla, Keith Meyer, Jennifer A. Faralli, Donna M. Peters
Software Mentions: 5
Published: over 3 years ago

10.7554/eLife.55305

Unexplained repeated pregnancy loss is associated with altered perceptual and brain responses to men’s body-odor
Cited by: 11
Author(s): Liron Rozenkrantz, Reut Weissgross, Tali Weiss, Inbal Ravreby, Idan Frumin, Sagit Shushan, Lior Gorodisky, Netta Reshef, Yael Holzman, Liron Pinchover, Yaara Endevelt‐Shapira, Eva Mishor, Timna Soroka, Maya Finkel, Liav Tagania, Aharon Ravia, Ofer Perl, Edna Furman‐Haran, Howard Carp, Noam Sobel
Software Mentions: 5
Published: over 4 years ago

10.1186/s12913-020-05916-w

The “Healthy Akame!” community – government – university collaboration for health: a community-based participatory mixed-method approach to address health issue in rural Japan
Cited by: 1
Author(s): Marinda Asiah Nuril Haya, Shuhei Ichikawa, Yukino Shibagaki, Hideki Wakabayashi, Yousuke Takemura
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pone.0205804

Risk taking of educated nematodes
Cited by: 15
Author(s): Denis S. Willett, Hans T. Alborn, Lukasz L. Stelinski, David I. Shapiro‐Ilan
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-020-68020-3

Human-like maternal left-cradling bias in monkeys is altered by social pressure
Cited by: 18
Author(s): Grégoire Boulinguez-Ambroise, Emmanuelle Pouydebat, Éloïse Disarbois, Adrien Meguerditchian
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0219847

Does diversifying crop rotations suppress weeds? A meta-analysis
Cited by: 100
Author(s): David Weisberger, Virginia Nichols, Matt Liebman
Software Mentions: 5
Published: over 5 years ago

10.1186/s13046-021-02031-4

Elesclomol-induced increase of mitochondrial reactive oxygen species impairs glioblastoma stem-like cell survival and tumor growth
Cited by: 35
Author(s): Mariachiara Buccarelli, Quintino Giorgio D’Alessandris, Paola Matarrese, Cristiana Mollinari, Michele Signore, Andrea Cappannini, Maurizio Martini, Pierluigi D’Aliberti, Gabriele De Luca, Francesca Pedini, Alessandra Boe, Mauro Biffoni, Roberto Pallini, Lucia Ricci‐Vitiani
Software Mentions: 5
Published: over 3 years ago

10.1186/s12880-021-00602-7

Differentiation of brain metastases from small and non-small lung cancers using apparent diffusion coefficient (ADC) maps
Cited by: 3
Author(s): Sebastian Johannes Müller, Eya Khadhraoui, Nicole E. Neef, Christian Riedel, Marielle Ernst
Software Mentions: 5
Published: over 3 years ago

10.3390/s21165286

Modelling and Differential Quantification of Electric Cell-Substrate Impedance Sensing Growth Curves
Cited by: 4
Author(s): Anna Ronja Dorothea Binder, Andrej‐Nikolai Spiess, Michael W. Pfaffl
Software Mentions: 5
Published: over 3 years ago

Projects: cran: readxl

Papers Mentioning readxl 139