Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/v12101142

https://doi.org/10.3390/v12101142

A Diverse Virome of Leafroll-Infected Grapevine Unveiled by dsRNA Sequencing

Cited by: 24
Author(s): Mamadou L. Fall, De-Xiang Xu, Pierre Lemoyne, Issam Moussa, Carole Beaulieu, Odile Carisse
Published: about 4 years ago

Software Mentions 19

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: Heatplus
Heatmaps with row and/or column covariates and colored clusters
Papers that mentioned: 77
cran: ade4
Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Papers that mentioned: 809
cran: circlize
Circular Visualization
Papers that mentioned: 260
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
cran: colorspace
A Toolbox for Manipulating and Assessing Colors and Palettes
Papers that mentioned: 31
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: eesim
Simulate and Evaluate Time Series for Environmental Epidemiology
Papers that mentioned: 1
cran: GetoptLong
Parsing Command-Line Arguments and Simple Variable Interpolation
Papers that mentioned: 1
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: gplots
Various R Programming Tools for Plotting Data
Papers that mentioned: 2,122
cran: gridExtra
Miscellaneous Functions for "Grid" Graphics
Papers that mentioned: 298
cran: nlme
Linear and Nonlinear Mixed Effects Models
Papers that mentioned: 3,265
cran: phylogram
Dendrograms for Evolutionary Analysis
Papers that mentioned: 44
cran: picante
Integrating Phylogenies and Ecology
Papers that mentioned: 414
cran: readxl
Read Excel Files
Papers that mentioned: 139
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: cluster

Papers that mentioned: 416
pypi: colorspace
A small collection of hex-colors.
Papers that mentioned: 31