Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: micca

https://packages.ecosyste.ms/registries/pypi.org/packages/micca

micca - MICrobial Community Analysis
12 versions
Latest release: about 6 years ago
33 downloads last month

Papers Mentioning micca 14

Saccharomyces cerevisiae Induces Immune Enhancing and Shapes Gut Microbiota in Social Wasps
Cited by: 18
Author(s): Niccolò Meriggi, Monica Di Paola, Francesco Vitali, Damaríz Rivero, Federico Cappa, Francesco Turillazzi, Agnese Gori, Leonardo Dapporto, L. Beani, Stefano Turillazzi, Duccio Cavalieri
Software Mentions: 9
Published: almost 5 years ago

10.3389/fmicb.2018.00675

Gut Microbiota Profiling and Gut–Brain Crosstalk in Children Affected by Pediatric Acute-Onset Neuropsychiatric Syndrome and Pediatric Autoimmune Neuropsychiatric Disorders Associated With Streptococcal Infections
Cited by: 76
Author(s): Andrea Quagliariello, Federica Del Chierico, Alessandra Russo, Sofia Reddel, Giulia Conte, Loris Riccardo Lopetuso, Gianluca Ianiro, Bruno Dallapiccola, Francesco Cardona, Antonio Gasbarrini, Lorenza Putignani
Software Mentions: 5
Published: over 6 years ago

10.1089/ast.2018.1870

A Low-Diversity Microbiota Inhabits Extreme Terrestrial Basaltic Terrains and Their Fumaroles: Implications for the Exploration of Mars
Cited by: 18
Author(s): Charles S. Cockell, Jesse Patrick Harrison, Adam H. Stevens, Samuel J. Payler, S. S. Hughes, S. E. Kobs Nawotniak, A. L. Brady, R. C. Elphic, C. W. Haberle, A. Sehlke, K. Beaton, Andrew F. J. Abercromby, Petra Schwendner, Jennifer Wadsworth, Hanna Landenmark, Rosie Cane, Andrew W. Dickinson, Natasha Nicholson, Liam Perera, D. S. S. Lim
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-45724-9

Enrichment of intestinal Lactobacillus by enhanced secretory IgA coating alters glucose homeostasis in P2rx7−/− mice
Cited by: 18
Author(s): Lisa Perruzza, Francesco Strati, Giorgio Gargari, Anna Maria D’Erchia, Bruno Fosso, Graziano Pesole, Simone Guglielmetti, Fabio Grassi
Software Mentions: 4
Published: about 5 years ago

10.1111/1751-7915.12337

Dynamic changes in microbiota and mycobiota during spontaneous ‘<scp>V</scp>ino <scp>S</scp>anto <scp>T</scp>rentino’ fermentation
Cited by: 41
Author(s): Irene Stefanini, Davide Albanese, A. Cavazza, Elena Franciosi, Carlotta De Filippo, Claudio Donati, Duccio Cavalieri
Software Mentions: 4
Published: over 8 years ago

10.3389/fmicb.2017.00457

Core Microbiota and Metabolome of Vitis vinifera L. cv. Corvina Grapes and Musts
Cited by: 19
Author(s): Irene Stefanini, Silvia Carlin, Noemi Tocci, Davide Albanese, Claudio Donati, Pietro Franceschi, Michele Paris, Alberto Zenato, Silvano Tempesta, Alberto Bronzato, Urška Vrhovšek, Fulvio Mattivi, Duccio Cavalieri
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-021-84660-5

Supplementation of tuna hydrolysate and insect larvae improves fishmeal replacement efficacy of poultry by-product in Lates calcarifer (Bloch, 1790) juveniles
Cited by: 28
Author(s): Reaz Chaklader, Janet Howieson, Muhammad A.B. Siddik, Javed Foysal, Ravi Fotedar
Software Mentions: 3
Published: over 3 years ago

10.3897/BDJ.7.e35332

Exploring the taxonomic composition of two fungal communities on the Swedish west coast through metabarcoding
Cited by: 8
Author(s): Alice Retter, R. Henrik Nilsson, Sarah J. Bourlat
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-018-35329-z

Characterization of human breast tissue microbiota from core needle biopsies through the analysis of multi hypervariable 16S-rRNA gene regions
Cited by: 80
Author(s): Lara Costantini, Stefano Magno, Davide Albanese, Claudio Donati, Romina Molinari, Alessio Filippone, Riccardo Masetti, Nicolò Merendino
Software Mentions: 2
Published: almost 6 years ago

10.1038/s41598-020-72577-4

A novel universal primer pair for prokaryotes with improved performances for anammox containing communities
Cited by: 7
Author(s): Lorenzo Mazzoli, Giulio Munz, Tommaso Lotti, Matteo Ramazzotti
Software Mentions: 2
Published: almost 4 years ago

10.1007/s00253-021-11264-4

Gut microbiota profiles and characterization of cultivable fungal isolates in IBS patients
Cited by: 27
Author(s): Piero Sciavilla, Francesco Strati, Monica Di Paola, Monica Marianna Modesto, Francesco Vitali, Duccio Cavalieri, G.M. Prati, Maura Di Vito, Giovanni Aragona, Carlotta De Filippo, Paola Mattarelli
Software Mentions: 2
Published: over 3 years ago

10.1038/srep09743

MICCA: a complete and accurate software for taxonomic profiling of metagenomic data
Cited by: 197
Author(s): Davide Albanese, Paolo Fontana, Carlotta De Filippo, Duccio Cavalieri, Claudio Donati
Software Mentions: 1
Published: over 9 years ago

10.1038/s41598-020-78534-5

Composition and geographic variation of the bacterial microbiota associated with the coelomic fluid of the sea urchin Paracentrotus lividus
Cited by: 9
Author(s): Teresa Faddetta, Francesco Ardizzone, Francesca Faillaci, Chiara Reina, Emilia Palazzotto, Francesco Strati, Carlotta De Filippo, Giovanni Spinelli, Anna Maria Puglia, Giuseppe Gallo, Vincenzo Cavalieri
Software Mentions: 1
Published: almost 4 years ago

10.7717/peerj.6336

Gastric <i>Helicobacter pylori</i> infection perturbs human oral microbiota
Cited by: 8
Author(s): Eng Guan Chua, Ju Yee Chong, Binit Lamichhane, K. Mary Webberley, Barry J. Marshall, Michael J. Wise, Chin Yen Tay
Software Mentions: 1
Published: over 5 years ago