Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ff

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ff

Memory-Efficient Storage of Large Data on Disk and Fast Access Functions
26 versions
Latest release: almost 2 years ago
36 dependent packages
13,659 downloads last month

Papers Mentioning ff 14

Copy number polymorphisms near SLC2A9 are associated with serum uric acid concentrations
Cited by: 16
Author(s): Robert B. Scharpf, Lynn Mireles, Qiong Yang, Anna Köttgen, Ingo Ruczinski, Katalin Suszták, Eitan Halper-Stromberg, Adrienne Tin, Stephen Cristiano, Aravinda Chakravarti, Eric Boerwinkle, Caroline S. Fox, Josef Coresh, W. H. Linda Kao
Software Mentions: 56
Published: almost 11 years ago

10.1371/journal.pone.0169748

SoilGrids250m: Global gridded soil information based on machine learning
Cited by: 2,126
Author(s): Tomislav Hengl, Jorge Mendes de Jesus, G.B.M. Heuvelink, M. Ruiperez González, Milorad Kilibarda, Aleksandar Blagotić, Wei Shangguan, Marvin N. Wright, Xiaoyuan Geng, Bernhard Bauer-Marschallinger, Mário Guevara, Rodrigo Vargas, R.A. MacMillan, N.H. Batjes, J.G.B. Leenaars, Eloi Ribeiro, Ichsani Wheeler, S. Mantel
Software Mentions: 19
Published: almost 8 years ago

10.1534/g3.119.400018

BGData - A Suite of R Packages for Genomic Analysis with Big Data
Cited by: 23
Author(s): Alexander Grueneberg, Gustavo de los Campos
Software Mentions: 16
Published: over 5 years ago

10.1534/g3.117.300131

CONE: Community Oriented Network Estimation Is a Versatile Framework for Inferring Population Structure in Large-Scale Sequencing Data
Cited by: 12
Author(s): Markku Kuismin, Jon Ahlinder, Mikko Sillanpää
Software Mentions: 10
Published: about 7 years ago

10.1093/bioinformatics/btx392

matter: an R package for rapid prototyping with larger-than-memory datasets on disk
Cited by: 4
Author(s): Kylie A Bemis, Olga Vitek
Software Mentions: 10
Published: over 7 years ago

10.1038/s41598-017-09382-z

New approaches to high-resolution mapping of marine vertical structures
Cited by: 43
Author(s): Katleen Robert, Veerle A.I. Huvenne, Aggeliki Georgiopoulou, Daniel O. B. Jones, Leigh Marsh, Gareth Carter, Leo Chaumillon
Software Mentions: 9
Published: over 7 years ago

10.1038/s41598-017-11029-y

Integrated Analysis of Copy Number Variations and Gene Expression Profiling in Hepatocellular carcinoma
Cited by: 28
Author(s): Chixing Zhou, Wentao Zhang, Wanyong Chen, Yuehui Yin, Manar Atyah, Shuang Liu, Lei Guo, Yi Shi, Qing–Hai Ye, Qiongzhu Dong, Ning Ren
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.pcbi.1004140

Speeding Up Ecological and Evolutionary Computations in R; Essentials of High Performance Computing for Biologists
Cited by: 16
Author(s): Marco D. Visser, Sean M. McMahon, Cory Merow, Philip M. Dixon, Sydne Record, Eelke Jongejans
Software Mentions: 6
Published: over 9 years ago

10.1186/1471-2105-14-166

GWAS on your notebook: fast semi-parallel linear and logistic regression for genome-wide association studies
Cited by: 35
Author(s): Karolina Sikorska, Emmanuel Lesaffre, Patrick J. F. Groenen, Paul H.C. Eilers
Software Mentions: 4
Published: over 11 years ago

10.1186/gm172

Translational bioinformatics in the cloud: an affordable alternative
Cited by: 78
Author(s): Joel T. Dudley, Yannick Pouliot, Rong Chen, Alexander A. Morgan, Atul J. Butte
Software Mentions: 4
Published: almost 15 years ago

10.1371/journal.pgen.1002685

Using Whole-Genome Sequence Data to Predict Quantitative Trait Phenotypes in Drosophila melanogaster
Cited by: 183
Author(s): Ulrike Ober, Julien F. Ayroles, Eric A. Stone, Stephen M. Richards, Dianhui Zhu, Richard A. Gibbs, Christian Stricker, Daniel Gianola, Martin Schlather, Trudy F. C. Mackay, Henner Simianer
Software Mentions: 3
Published: over 12 years ago