An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/1471-2156-15-81
https://doi.org/10.1186/1471-2156-15-81
Cited by: 16
Author(s): Robert B. Scharpf, Lynn Mireles, Qiong Yang, Anna Köttgen, Ingo Ruczinski, Katalin Suszták, Eitan Halper-Stromberg, Adrienne Tin, Stephen Cristiano, Aravinda Chakravarti, Eric Boerwinkle, Caroline S. Fox, Josef Coresh, W. H. Linda Kao
Published: over 10 years ago
Software Mentions
56
Affymetrix File Parsing SDK
Papers that mentioned: 13
Tools for parsing Affymetrix data files
Papers that mentioned: 5
Biobase: Base functions for Bioconductor
Papers that mentioned: 104
S4 generic functions used in Bioconductor
Papers that mentioned: 15
Efficient manipulation of biological strings
Papers that mentioned: 220
Utilities for manipulating chromosome names, including modifying them to follow a particular naming style
Papers that mentioned: 7
Representation and manipulation of genomic intervals
Papers that mentioned: 323
Visualization tools for genomic data
Papers that mentioned: 53
Foundation of integer range manipulation in Bioconductor
Papers that mentioned: 62
Preprocessing tools for oligonucleotide arrays
Papers that mentioned: 204
Classes for high-throughput arrays supported by oligo and crlmm
Papers that mentioned: 3
A collection of pre-processing functions
Papers that mentioned: 146
Foundation of external vector representation and manipulation in Bioconductor
Papers that mentioned: 3
Classes and Methods for Fast Memory-Efficient Boolean Selections
Papers that mentioned: 3
Code Analysis Tools for R
Papers that mentioned: 3
Tools to Make Developing R Packages Easier
Papers that mentioned: 157
Memory-Efficient Storage of Large Data on Disk and Fast Access
Functions
Papers that mentioned: 14
Provides Foreach Looping Construct
Papers that mentioned: 50
Format R Code Automatically
Papers that mentioned: 3
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Miscellaneous Functions for "Grid" Graphics
Papers that mentioned: 298
Arrange 'Grobs' in Tables
Papers that mentioned: 15
Various R Programming Tools
Papers that mentioned: 60
A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157
Trellis Graphics for R
Papers that mentioned: 251
Extra Graphical Utilities Based on Lattice
Papers that mentioned: 60
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
Support Functions and Datasets for Venables and Ripley's MASS
Papers that mentioned: 2,353
Sparse and Dense Matrix Classes and Methods
Papers that mentioned: 172
'Memoisation' of Functions
Papers that mentioned: 1
Derivative-Free Optimization Algorithms by Quadratic
Approximation
Papers that mentioned: 4
Utilities for Using Munsell Colours
Papers that mentioned: 2
Linear and Nonlinear Mixed Effects Models
Papers that mentioned: 3,265
Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468
Prototype Object-Based Programming
Papers that mentioned: 5
ColorBrewer Palettes
Papers that mentioned: 490
Seamless R and C++ Integration
Papers that mentioned: 152
'Rcpp' Integration for the 'Eigen' Templated Linear Algebra
Library
Papers that mentioned: 12
General Network (HTTP/FTP/...) Client Interface for R
Papers that mentioned: 36
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
SQLite Interface for R
Papers that mentioned: 27
Scale Functions for Visualization
Papers that mentioned: 104
Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172
Bitcoin made easy.
Papers that mentioned: 3
code analysis and execution tools
Papers that mentioned: 3
Python's missing debug print command, and more.
Papers that mentioned: 157
A kit for files finding
Papers that mentioned: 14
A fast table-like container for data analytics
Papers that mentioned: 15
A framework for developing data models, including schema development and documentation.
Papers that mentioned: 251
Memoise decorator.
Papers that mentioned: 1
UNOFFICIAL Python client for i-DE
Papers that mentioned: 204
UNKNOWN
Papers that mentioned: 468
Stats for Python processes
Papers that mentioned: 104
Splines in Euclidean Space and Beyond
Papers that mentioned: 91
Package for XVector API access
Papers that mentioned: 3