Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: PROcess
https://packages.ecosyste.ms/registries/bioconductor.org/packages/PROcess
Ciphergen SELDI-TOF Processing
1 version
Latest release: 12 months ago
57,938 downloads total
Papers Mentioning PROcess 15
10.1002/pmic.201400392
Visualization of proteomics data using R and BioconductorCited by: 46
Author(s): Laurent Gatto, Lisa M. Breckels, Thomas Naake, Sebastian Gibb
Software Mentions: 62
Published: over 9 years ago
10.1186/1471-2105-10-363
A novel R-package graphic user interface for the analysis of metabonomic profilesCited by: 51
Author(s): José Luis Izquierdo-García, Ignacio Rodríguez, Angelos Kyriazis, Palmira Villa, Pilar Barreiro Elorza, Manuel Desco, Jesús Ruíz-Cabello
Software Mentions: 13
Published: almost 15 years ago
10.3389/fnins.2012.00187
Systems Biology, Bioinformatics, and Biomarkers in NeuropsychiatryCited by: 43
Author(s): Ali Alawieh, Fadi A. Zaraket, Jianliang Li, Stefania Mondello, Amaly Nokkari, Mahdi Razafsha, Bilal H. Fadlallah, Rose‐Mary Boustany, Firas Kobeissy
Software Mentions: 7
Published: almost 13 years ago
10.1186/1756-0500-6-358
Identifying technical aliases in SELDI mass spectra of complex mixtures of proteinsCited by: 1
Author(s): John C. Whitin, Srinivasa Rangan, Harvey J. Cohen
Software Mentions: 5
Published: about 11 years ago
10.1186/s12859-015-0752-4
Mass-Up: an all-in-one open software application for MALDI-TOF mass spectrometry knowledge discoveryCited by: 85
Author(s): Hugo López-Fernández, Hugo M. Santos, José Luís Capelo, Florentino Fdez-Riverola, Daniel Glez-Peña, Miguel Reboiro-Jato
Software Mentions: 3
Published: about 9 years ago
10.1186/1471-2105-11-518
Accurate peak list extraction from proteomic mass spectra for identification and profiling studiesCited by: 11
Author(s): Nicola Barbarini, Paolo Magni
Software Mentions: 2
Published: almost 14 years ago
10.1371/journal.pone.0012493
A Novel Preprocessing Method Using Hilbert Huang Transform for MALDI-TOF and SELDI-TOF Mass Spectrometry DataCited by: 22
Author(s): Li Wu, Hsin Hao Chen, Jorng-Tzong Horng, Chen Lin, Norden E. Huang, Yu Cheng, Kuang Fu Cheng
Software Mentions: 2
Published: about 14 years ago
10.1371/journal.pone.0026294
Reproducible Cancer Biomarker Discovery in SELDI-TOF MS Using Different Pre-Processing AlgorithmsCited by: 9
Author(s): Jinfeng Zou, Hong Guan, Xinwu Guo, Lin Zhang, Chen Yao, Jing Wang, Zheng Guo
Software Mentions: 2
Published: almost 13 years ago
10.1186/s12953-016-0107-8
Informed baseline subtraction of proteomic mass spectrometry data aided by a novel sliding window algorithmCited by: 5
Author(s): Tyman Stanford, Christopher J. Bagley, P. J. Solomon
Software Mentions: 2
Published: almost 8 years ago
10.1186/1471-2105-12-140
Biomarker Discovery and Redundancy Reduction towards Classification using a Multi-factorial MALDI-TOF MS T2DM Mouse Model DatasetCited by: 5
Author(s): Chris Bauer, Frank Kleinjung, Celia Smith, Mark Towers, Ali Tiss, Alexandra Chadt, Tanja Dreja, Dieter Beule, Hadi Al‐Hasani, Knut Reinert, Johannes Schuchhardt, Rainer Cramer
Software Mentions: 1
Published: over 13 years ago
10.1186/1471-2105-10-S1-S51
Analysis of mass spectrometry data using sub-spectraCited by: 8
Author(s): Wouter Meuleman, Judith Y. M. N. Engwegen, Marie-Christine W. Gast, Lodewyk Wessels, Marcel J. T. Reinders
Software Mentions: 1
Published: almost 16 years ago
10.1186/1471-2164-10-S1-S3
Comparison of feature selection and classification for MALDI-MS dataCited by: 39
Author(s): Qingzhong Liu, Andrew H. Sung, Mengyu Qiao, Zhongxue Chen, Jack Yang, Mary Qu Yang, Xudong Huang, Youping Deng
Software Mentions: 1
Published: over 15 years ago
10.1186/1472-6947-9-13
BioSunMS: a plug-in-based software for the management of patients information and the analysis of peptide profiles from mass spectrometryCited by: 8
Author(s): Yuan Cao, Na Wang, Xiaomin Ying, Ailing Li, Hengsha Wang, Xuemin Zhang, Wuju Li
Software Mentions: 1
Published: over 15 years ago
10.1186/1471-2105-10-4
Comparison of public peak detection algorithms for MALDI mass spectrometry data analysisCited by: 231
Author(s): Chao Yang, Zengyou He, Weichuan Yu
Software Mentions: 1
Published: almost 16 years ago