Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: exp

https://packages.ecosyste.ms/registries/pypi.org/packages/exp

Python tool do design and run experiments with global optimisation and grid search
8 versions
Latest release: almost 6 years ago
231 downloads last month

Papers Mentioning exp 14

Analysing time course microarray data using Bioconductor: a case study using yeast2 Affymetrix arrays
Cited by: 17
Author(s): Colin S. Gillespie, Guiyuan Lei, Richard J. Boys, Amanda Greenall, Darren J. Wilkinson
Software Mentions: 11
Published: almost 15 years ago

10.1099/mgen.0.000320

Cost effective, experimentally robust differential-expression analysis for human/mammalian, pathogen and dual-species transcriptomics
Cited by: 0
Author(s): Amol C. Shetty, John Mattick, Matthew Chung, Carrie McCracken, Anup Mahurkar, Scott G. Filler, Claire M. Fraser, David A. Rasko, Vincent M. Bruno, Julie C. Dunning Hotopp
Software Mentions: 6
Published: almost 5 years ago

10.3390/e22091057

Software Requirements Classification Using Machine Learning Algorithms
Cited by: 42
Author(s): Edna Dias Canedo, Bruno Cordeiro Mendes
Software Mentions: 4
Published: over 4 years ago

10.12688/wellcomeopenres.15058.1

The Virtual Electrode Recording Tool for EXtracellular Potentials (VERTEX) Version 2.0: Modelling in vitro electrical stimulation of brain tissue
Cited by: 1
Author(s): Christopher Thornton, Frances Hutchings, Marcus Kaiser
Software Mentions: 4
Published: almost 6 years ago

10.1186/s12859-017-1490-6

Multiple network algorithm for epigenetic modules via the integration of genome-wide DNA methylation and gene expression data
Cited by: 51
Author(s): Xiaoke Ma, Zaiyi Liu, Zhongyuan Zhang, Xiaotai Huang, Wanxin Tang
Software Mentions: 3
Published: almost 8 years ago

10.3389/fnins.2021.720778

Cerebrospinal Fluid MicroRNA Changes in Cognitively Normal Veterans With a History of Deployment-Associated Mild Traumatic Brain Injury
Cited by: 3
Author(s): Theresa A. Lusardi, Ursula S. Sandau, Nikita A. Sakhanenko, Sarah Catherine B Baker, Jack Wiedrick, Jodi Lapidus, Murray A. Raskind, Ge Li, Elaine R. Peskind, David J. Galas, Joseph F. Quinn, Julie A. Saugstad
Software Mentions: 3
Published: over 3 years ago

10.5195/jmla.2018.283

A systematic approach to searching: an efficient and complete method to develop literature searches
Cited by: 247
Author(s): Wichor M. Bramer, Gerdien B. de Jonge, Melissa L. Rethlefsen, F. Mast, Jos Kleijnen
Software Mentions: 3
Published: about 6 years ago

10.1523/ENEURO.0406-19.2020

Rigbox: An Open-Source Toolbox for Probing Neurons and Behavior
Cited by: 18
Author(s): Jai Bhagat, Miles J. Wells, Kenneth D. Harris, Matteo Carandini, Christopher Burgess
Software Mentions: 2
Published: over 4 years ago

10.1002/acm2.13200

Toward automation of initial chart check for photon/electron EBRT: the clinical implementation of new AAPM task group reports and automation techniques
Cited by: 3
Author(s): Huijun Xu, Baoshe Zhang, Mariana Guerrero, Sung‐Woo Lee, Narottam Lamichhane, Shifeng Chen, B Yi
Software Mentions: 2
Published: almost 4 years ago

10.1186/1471-244X-13-113

Is computerised CBT really helpful for adult depression?-A meta-analytic re-evaluation of CCBT for adult depression in terms of clinical implementation and methodological validity
Cited by: 115
Author(s): Mirai So, Sosei Yamaguchi, Sora Hashimoto, Mitsuhiro Sado, Toshi A Furukawa, Paul McCrone
Software Mentions: 2
Published: over 11 years ago