Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
cran: miceadds
Some Additional Multiple Imputation Functions, Especially for 'mice'Papers that mentioned: 20
pypi: pyGenomeTracks
Command-line tool to make beautiful and reproducible genome browser snapshotsPapers that mentioned: 20
bioconductor: PADOG
Pathway Analysis with Down-weighting of Overlapping Genes (PADOG)Papers that mentioned: 19
bioconductor: MassSpecWavelet
Peak Detection for Mass Spectrometry data using wavelet-based algorithmsPapers that mentioned: 19
pypi: OpenElectrophy
OpenElectrophy : an electrophysiological data- and analysis-sharing frameworkPapers that mentioned: 19
cran: BacArena
Modeling Framework for Cellular Communities in their EnvironmentsPapers that mentioned: 19
pypi: gprofiler
Python port of the R wrapper for the g:Profiler functional enrichment tool.Papers that mentioned: 19
cran: ergm
Fit, Simulate and Diagnose Exponential-Family Models for NetworksPapers that mentioned: 19
pypi: repDNA
a Python package to generate various modes of feature vectors for DNA sequences by incorporating user-defined physicochemical properties and sequence-order effectsPapers that mentioned: 19
bioconductor: Cardinal
A mass spectrometry imaging toolbox for statistical analysisPapers that mentioned: 19
cran: grpreg
Regularization Paths for Regression Models with Grouped CovariatesPapers that mentioned: 19
pypi: designer
Student-friendly and evidence-based visual graphics library.Papers that mentioned: 19
pypi: MUSiCC
MUSICC: A marker genes based framework for metagenomic normalization and accurate profiling of gene abundances in the microbiome.Papers that mentioned: 19
pypi: theta
Deep learning toolbox for end-to-end text information extraction tasks.Papers that mentioned: 19
pypi: pytraj
Python API for cpptraj: a data analysis package for biomolecular simulationPapers that mentioned: 19
bioconductor: flowStats
Statistical methods for the analysis of flow cytometry dataPapers that mentioned: 19
bioconductor: RPA
RPA: Robust Probabilistic Averaging for probe-level analysisPapers that mentioned: 19
pypi: VGA
Python package implements the Group Additivity (GA) method for estimating thermodynamic propertiesPapers that mentioned: 19
cran: ridge
Ridge Regression with Automatic Selection of the Penalty ParameterPapers that mentioned: 19
pypi: SLC
A tool that allows you to connect to and run SQL commands to an SQLite3 database easily.Papers that mentioned: 19
pypi: ridge
Python Machine Learning Library specialized in L2R and Recommendation.Papers that mentioned: 19
cran: tidyLPA
Easily Carry Out Latent Profile Analysis (LPA) Using Open-Source or Commercial SoftwarePapers that mentioned: 19
bioconductor: ELMER
Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer MethylomesPapers that mentioned: 19