Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: bioconductor: PAA

https://packages.ecosyste.ms/registries/bioconductor.org/packages/PAA

PAA (Protein Array Analyzer)
1 version
Latest release: about 1 year ago
16,168 downloads total

Papers Mentioning PAA 19

10.1002/pmic.201400392

Visualization of proteomics data using R and Bioconductor
Cited by: 46
Author(s): Laurent Gatto, Lisa M. Breckels, Thomas Naake, Sebastian Gibb
Software Mentions: 62
Published: over 9 years ago

Common virulence gene expression in adult first-time infected malaria patients and severe cases
Cited by: 15
Author(s): Jan Stephan Wichers, Gerry Tonkin‐Hill, Thorsten Thye, Ralf Krumkamp, Benno Kreuels, Jan Strauss, Heidrun von Thien, Jochen Scholz, Helle Hansson, Rasmus Weisel Jensen, Louise Turner, Freia-Raphaella Lorenz, Anna Schöllhorn, Iris Bruchhaus, Egbert Tannich, Rolf Fendel, Thomas D. Otto, Thomas Lavstsen, Tim‐Wolf Gilberger, Michael Duffy, Anna Bachmann
Software Mentions: 9
Published: over 3 years ago

10.1186/s12859-020-03722-z

PAWER: protein array web exploreR
Cited by: 4
Author(s): Dmytro Fishman, Ivan Kuzmin, Priit Adler, Jaak Vilo, Hedi Peterson
Software Mentions: 7
Published: over 4 years ago

10.12688/f1000research.14330.2

Predictive physiological anticipatory activity preceding seemingly unpredictable stimuli: An update of Mossbridge et al’s meta-analysis
Cited by: 11
Author(s): Michael W. Duggan, Patrizio Tressoldi
Software Mentions: 6
Published: over 6 years ago

10.1186/s13293-021-00368-1

Hepatic steatosis and steatohepatitis: a functional meta-analysis of sex-based differences in transcriptomic studies
Cited by: 16
Author(s): José F. Català-Senent, Marta R. Hidalgo, Marina Berenguer, Gopanandan Parthasarathy, Harmeet Malhi, Pablo Malmierca-Merlo, María de la Iglesia-Vayá, Francisco García‐García
Software Mentions: 5
Published: over 3 years ago

10.1093/jamiaopen/ooab065

P2T2: Protein Panoramic annoTation Tool for the interpretation of protein coding genetic variants
Cited by: 0
Author(s): Elias DeVoe, Gavin R. Oliver, Roman M. Zenka, Patrick R. Blackburn, Margot A. Cousin, Nicole J. Boczek, Jean-Pierre A. Kocher, Raúl Urrutia, Eric W. Klee, Michael T. Zimmermann
Software Mentions: 5
Published: over 3 years ago

10.1186/s12911-018-0717-4

A classification framework for exploiting sparse multi-variate temporal features with application to adverse drug event detection in medical records
Cited by: 29
Author(s): Francesco Bagattini, Isak Karlsson, Jonathan Rebane, Panagiotis Papapetrou
Software Mentions: 4
Published: almost 6 years ago

10.1007/s10618-016-0483-9

The great time series classification bake off: a review and experimental evaluation of recent algorithmic advances
Cited by: 864
Author(s): Anthony Bagnall, Jason Lines, Aaron Bostrom, James Large, Eamonn Keogh
Software Mentions: 4
Published: about 8 years ago

10.1186/s12967-018-1452-4

Baseline antibody profiles predict toxicity in melanoma patients treated with immune checkpoint inhibitors
Cited by: 93
Author(s): Michael Gowen, Keith M. Giles, Danny Simpson, Jeremy Tchack, Hua Zhou, Una Moran, Zarmeena Dawood, Anna C. Pavlick, Shaohui Hu, Melissa A. Wilson, Judy Zhong, Michelle Krogsgaard, Tomas Kirchhoff, Iman Osman
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2148-12-23

Evaluating multiple criteria for species delimitation: an empirical example using Hawaiian palms (Arecaceae: Pritchardia)
Cited by: 40
Author(s): Christine D. Bacon, Miles J. McKenna, Mark P. Simmons, Warren L. Wagner
Software Mentions: 2
Published: almost 13 years ago

10.1093/bioinformatics/btw037

PAA: an R/bioconductor package for biomarker discovery with protein microarrays
Cited by: 23
Author(s): Michael Turewicz, Maike Ahrens, Caroline May, Katrin Marcus, Martin Eisenacher
Software Mentions: 2
Published: almost 9 years ago

10.1038/s41598-020-78155-y

Classification of invasive bloodstream infections and Plasmodium falciparum malaria using autoantibodies as biomarkers
Cited by: 1
Author(s): Ralf Krumkamp, Nicole S. Struck, Eva Lorenz, Marlow Zimmermann, Kennedy Gyau Boahen, Nimako Sarpong, Ellis Owusu‐Dabo, Gi Deok Pak, Hyon Jin Jeon, Florian Marks, Thomas Jacobs, Jürgen May, Daniel Eibach
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0014448

Mitochondrial Cox1 Sequence Data Reliably Uncover Patterns of Insect Diversity But Suffer from High Lineage-Idiosyncratic Error Rates
Cited by: 88
Author(s): Lars Hendrich, Joan Pons, Ignacio Ribera, Michael Balke
Software Mentions: 1
Published: almost 14 years ago

10.3390/s131114888

PANATIKI: A Network Access Control Implementation Based on PANA for IoT Devices
Cited by: 29
Author(s): Pedro Moreno-Sanchez, Rafa Marin Lopez, Antonio F. Skarmeta
Software Mentions: 1
Published: about 11 years ago

10.3390/s20072148

Parametric Acoustic Array and Its Application in Underwater Acoustic Engineering
Cited by: 16
Author(s): Hanyun Zhou, S.H. Huang, Wei Li
Software Mentions: 1
Published: over 4 years ago

10.2196/25237

Improving Current Glycated Hemoglobin Prediction in Adults: Use of Machine Learning Algorithms with Electronic Health Records (Preprint)
Cited by: 4
Author(s): Zakhriya Alhassan, Matthew Watson, David Budgen, Riyad Alshammari, Ali Alessa, Noura Al Moubayed
Software Mentions: 1
Published: about 4 years ago

10.3389/fnhum.2014.00146

Predicting the unpredictable: critical analysis and practical implications of predictive anticipatory activity
Cited by: 40
Author(s): Julia Mossbridge, Patrizio Tressoldi, Jessica Utts, John A. Ives, Dean Radin, Wayne B. Jonas
Software Mentions: 1
Published: over 10 years ago

10.1098/rsif.2015.1007

Quantitative analysis of harmonic convergence in mosquito auditory interactions
Cited by: 33
Author(s): Andy J Aldersley, Alan R Champneys, Martin Homer, Daniel Robert
Software Mentions: 1
Published: over 8 years ago

10.3389/frobt.2019.00099

Symbolic-Based Recognition of Contact States for Learning Assembly Skills
Cited by: 8
Author(s): Ali Al-Yacoub, Yuchen Zhao, Niels Lohse, Mey Goh, Peter Kinnell, Pedro Ferreira, Ella‐Mae Hubbard
Software Mentions: 1
Published: about 5 years ago