Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: pypi: NetView
https://packages.ecosyste.ms/registries/pypi.org/packages/NetView
Network Grapher
18 versions
Latest release: over 4 years ago
17 downloads last month
Papers Mentioning NetView 20
10.1128/mBio.01105-19
Evolution and Global Transmission of a Multidrug-Resistant, Community-Associated Methicillin-Resistant Staphylococcus aureus Lineage from the Indian SubcontinentCited by: 42
Author(s): Eike J. Steinig, Sebastián Duchêne, D. Ashley Robinson, Stefan Monecke, Maho Yokoyama, Maisem Laabei, Peter Slickers, Patiyan Andersson, Deborah A. Williamson, Angela Kearns, Richard V. Goering, Elizabeth Dickson, Ralf Ehricht, Margaret Ip, Matthew V. N. O’Sullivan, Geoffrey W. Coombs, Andreas Petersen, Gráinne I. Brennan, Anna C. Shore, David C. Coleman, Annalisa Pantosti, Hermı́nia de Lencastre, Henrik Westh, Nobumichi Kobayashi, Helen Heffernan, Birgit Strommenger, Franziska Layer, Stefan Weber, Hege Vangstein Aamot, Leila Skakni, Sharon J. Peacock, Derek S. Sarovich, Simon R. Harris, Julian Parkhill, Ruth C. Massey, Matthew T. G. Holden, Stephen D. Bentley, Steven Y. C. Tong
Software Mentions: 10
Published: almost 5 years ago
10.1038/s41598-021-85262-x
Evaluation of genetic diversity and management of disease in Border Collie dogsCited by: 7
Author(s): Pamela Xing Yi Soh, Wei-Feng Hsu, Mehar S. Khatkar, Peter Williamson
Software Mentions: 5
Published: over 3 years ago
10.1371/journal.pone.0048375
NetView: A High-Definition Network-Visualization Approach to Detect Fine-Scale Population Structures from Genome-Wide Patterns of VariationCited by: 99
Author(s): Markus Neuditschko, Mehar S. Khatkar, Herman W. Raadsma
Software Mentions: 4
Published: about 12 years ago
10.1186/s12864-020-07084-x
Fine-scale population structure and evidence for local adaptation in Australian giant black tiger shrimp (Penaeus monodon) using SNP analysisCited by: 12
Author(s): Nga Thi Thu Vu, Kyall R. Zenger, Jarrod L. Guppy, Melony J. Sellars, Catarina N. S. Silva, Shannon R. Kjeldsen, Dean R. Jerry
Software Mentions: 3
Published: about 4 years ago
10.1186/1471-2164-13-282
NetWalker: a contextual network analysis tool for functional genomicsCited by: 94
Author(s): Kakajan Komurov, Serkan Dursun, Serkan Erdin, Prahlad T. Ram
Software Mentions: 2
Published: almost 13 years ago
10.1371/journal.pone.0225847
Runs of Homozygosity and NetView analyses provide new insight into the genome-wide diversity and admixture of three German cattle breedsCited by: 17
Author(s): Sowah Addo, Stefanie Klingel, Dirk Hinrichs, Georg Thaller
Software Mentions: 2
Published: almost 5 years ago
10.1371/journal.pone.0177638
Identification of key contributors in complex population structuresCited by: 12
Author(s): Markus Neuditschko, Herman W. Raadsma, Mehar S. Khatkar, Elisabeth Jonas, Eike J. Steinig, Christine Flury, Heidi Signer-Hasler, Mirjam Frischknecht, Ruedi von Niederhäusern, Tosso Leeb, Stefan Rieder
Software Mentions: 2
Published: over 7 years ago
10.1186/s12864-018-5044-8
Genome-wide SNP analyses reveal high gene flow and signatures of local adaptation among the scalloped spiny lobster (Panulirus homarus) along the Omani coastlineCited by: 21
Author(s): Rafaida Dhuhai Gharib Al-Breiki, Shannon R. Kjeldsen, Hasifa Afzal, Manal Saif Al Hinai, Kyall R. Zenger, Dean R. Jerry, Mohammed Al-Abri, Madjid Delghandi
Software Mentions: 2
Published: about 6 years ago
10.1186/s12864-019-5564-x
High-resolution population structure and runs of homozygosity reveal the genetic architecture of complex traits in the Lipizzan horseCited by: 29
Author(s): Gertrud Grilz-Seger, Thomas Druml, Markus Neuditschko, Max Dobretsberger, Michaela Horná, Gottfried Brem
Software Mentions: 2
Published: over 5 years ago
10.1186/s12864-016-3410-y
Swept away: ocean currents and seascape features influence genetic structure across the 18,000 Km Indo-Pacific distribution of a marine invertebrate, the black-lip pearl oyster Pinctada margaritiferaCited by: 46
Author(s): Monal M. Lal, Paul C. Southgate, Dean R. Jerry, Cyprien Bosserelle, Kyall R. Zenger
Software Mentions: 2
Published: almost 8 years ago
10.1371/journal.pone.0161390
A Parallel Population Genomic and Hydrodynamic Approach to Fishery Management of Highly-Dispersive Marine Invertebrates: The Case of the Fijian Black-Lip Pearl Oyster Pinctada margaritiferaCited by: 18
Author(s): Monal M. Lal, Paul C. Southgate, Dean R. Jerry, Cyprien Bosserelle, Kyall R. Zenger
Software Mentions: 2
Published: about 8 years ago
10.1111/eva.12918
Fine‐scale barriers to connectivity across a fragmented South‐East Asian landscape in six songbird speciesCited by: 9
Author(s): Emilie Cros, Elize Y. X. Ng, Rachel Rui Ying Oh, Qian Tang, Suzan Benedick, David P. Edwards, Suzanne Tomassi, Martin Irestedt, Per G. P. Ericson, Frank E. Rheindt
Software Mentions: 2
Published: over 4 years ago
10.1038/s41437-018-0144-4
Genomic comparisons reveal biogeographic and anthropogenic impacts in the koala (Phascolarctos cinereus): a dietary-specialist species distributed across heterogeneous environmentsCited by: 23
Author(s): Shannon R. Kjeldsen, Herman W. Raadsma, Kellie Leigh, Jennifer R. Tobey, David N. Phalen, Andrew K. Krockenberger, William Ellis, Emily Hynes, Damien P. Higgins, Kyall R. Zenger
Software Mentions: 2
Published: about 6 years ago
10.1371/journal.pone.0250608
Genetic diversity and the application of runs of homozygosity-based methods for inbreeding estimation in German White-headed Mutton sheepCited by: 7
Author(s): Sowah Addo, Stefanie Klingel, Georg Thaller, Dirk Hinrichs
Software Mentions: 1
Published: over 3 years ago
10.3389/fmicb.2018.01453
Global Scale Dissemination of ST93: A Divergent Staphylococcus aureus Epidemic Lineage That Has Recently Emerged From Remote Northern AustraliaCited by: 25
Author(s): Sebastiaan J. van Hal, Eike J. Steinig, Patiyan Andersson, Matthew T. G. Holden, Simon R. Harris, Graeme R. Nimmo, Deborah A. Williamson, Helen Heffernan, Stephen Ritchie, Angela Kearns, Matthew J. Ellington, Elizabeth Dickson, Hermı́nia de Lencastre, Geoffrey W. Coombs, Stephen D. Bentley, Julian Parkhill, Deborah C. Holt, Philip M. Giffard, Steven Y. C. Tong
Software Mentions: 1
Published: over 6 years ago
10.1093/gbe/evz118
Population Genomic Signatures of Genetic Structure and Environmental Selection in the Catadromous Roughskin Sculpin Trachidermus fasciatusCited by: 16
Author(s): Yulong Li, Dong‐Xiu Xue, Bai-Dong Zhang, Jinxian Liu
Software Mentions: 1
Published: over 5 years ago
10.1007/s00335-019-09820-5
Genome-wide scans identify known and novel regions associated with prolificacy and reproduction traits in a sub-Saharan African indigenous sheep (Ovis aries)Cited by: 23
Author(s): Asrat Tera Dolebo, Negar Khayatzadeh, Aberra Melesse, David Wragg, Mourad Rekik, Aynalem Haile, Barbara Rischkowsky, Max F. Rothschild, Joram M. Mwacharo
Software Mentions: 1
Published: almost 5 years ago
10.3390/ani10091520
Genetic Variability in Polish Lowland Sheepdogs Assessed by Pedigree and Genomic DataCited by: 2
Author(s): Paula Wiebke Michels, O. Distl
Software Mentions: 1
Published: about 4 years ago
10.1038/s41598-019-44137-y
Genetic homogenization of indigenous sheep breeds in Northwest AfricaCited by: 17
Author(s): Ibrahim Belabdi, Abdessamad Ouhrouch, Mohamed Lafri, Semir Bechir Suheil Gaouar, Elena Ciani, Ahmed Redha Benali, Hakim Ould Ouelhadj, Abdelmajid Haddioui, François Pompanon, Véronique Blanquet, Dominique Taurisson-Mouret, Sahraoui Harkat, Johannes A. Lenstra, Badr Benjelloun, Anne Da Silva
Software Mentions: 1
Published: over 5 years ago
10.1111/eva.13118
Ethiopian indigenous goats offer insights into past and recent demographic dynamics and local adaptation in sub‐Saharan African goatsCited by: 5
Author(s): Getinet Mekuriaw Tarekegn, Negar Khayatzadeh, Bin Liu, Sarah Osama, Aynalem Haile, Barbara Rischkowsky, Wenguang Zhang, Kassahun Tesfaye, Tadelle Dessie, Okeyo Ally Mwai, Appolinaire Djikeng, Joram M. Mwacharo
Software Mentions: 1
Published: over 3 years ago