Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: DIME
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/DIME
Differential Identification using Mixture Ensemble
4 versions
Latest release: over 2 years ago
1 dependent package
283 downloads last month
Papers Mentioning DIME 19
10.1186/1471-2164-14-S8-S3
QChIPat: a quantitative method to identify distinct binding patterns for two biological ChIP-seq samples in different experimental conditionsCited by: 28
Author(s): Bin Liu, Jimmy Yi, Aishwarya Sv, Xun Lan, Yiyi Ma, Tim H.M. Huang, Gustavo Leone, Victor X. Jin
Software Mentions: 4
Published: almost 11 years ago
10.1371/journal.pcbi.1003326
Practical Guidelines for the Comprehensive Analysis of ChIP-seq DataCited by: 228
Author(s): Timonthy Bailey, Paweł Krajewski, István Ladunga, Céline Lefèbvre, Qunhua Li, Tao Liu, Pedro Madrigal, Cenny Taslim, Jie Zhang
Software Mentions: 4
Published: about 11 years ago
10.3389/fimmu.2021.669400
Integration of Immunome With Disease-Gene Network Reveals Common Cellular Mechanisms Between IMIDs and Drug Repurposing StrategiesCited by: 4
Author(s): Abhinandan Devaprasad, Timothy R D J Radstake, Aridaman Pandit
Software Mentions: 3
Published: over 3 years ago
10.1186/1471-2164-15-S9-S12
dCaP: detecting differential binding events in multiple conditions and proteinsCited by: 4
Author(s): Kuan Bei Chen, Ross C. Hardison, Yu Zhang
Software Mentions: 3
Published: almost 10 years ago
10.1186/1471-2164-14-826
MMDiff: quantitative testing for shape changes in ChIP-Seq data setsCited by: 29
Author(s): Gabriele Schweikert, Botond Cseke, Thomas Clouaire, Adrian Bird, Guido Sanguinetti
Software Mentions: 3
Published: almost 12 years ago
10.3390/v13091757
Enrichment of SARS-CoV-2 Entry Factors and Interacting Intracellular Genes in Tissue and Circulating Immune CellsCited by: 2
Author(s): Abhinandan Devaprasad, Aridaman Pandit
Software Mentions: 2
Published: about 3 years ago
10.1016/j.csbj.2015.05.002
BOG: R-package for Bacterium and virus analysis of Orthologous GroupsCited by: 8
Author(s): Jincheol Park, Cenny Taslim, Shili Lin
Software Mentions: 2
Published: almost 10 years ago
10.1155/2014/758718
A Mixture Modeling Framework for Differential Analysis of High-Throughput DataCited by: 2
Author(s): Cenny Taslim, Shili Lin
Software Mentions: 1
Published: almost 11 years ago
10.1186/s13031-020-00323-8
Exploring the mental health and psychosocial problems of Congolese refugees living in refugee settings in Rwanda and Uganda: a rapid qualitative studyCited by: 17
Author(s): Anna Chiumento, Théoneste Rutayisire, Emmanuel Sarabwe, M. Tasdik Hasan, Rosco Kasujja, Rachel Nabirinde, Joseph Mugarura, Daniel M. Kagabo, Paul Bangirana, Stefan Jansen, Peter Ventevogel, Jude Robinson, Ross White
Software Mentions: 1
Published: about 4 years ago
10.1186/s13031-020-00290-0
No implementation without cultural adaptation: a process for culturally adapting low-intensity psychological interventions in humanitarian settingsCited by: 37
Author(s): Camila Perera, Alicia Salamanca-Sanabria, Joyce Caballero-Bernal, Lya Feldman, Maj Hansen, Martha Bird, Pernille Hansen, Cecilie Dinesen, Nana Wiedemann, Frédérique Vallières
Software Mentions: 1
Published: over 4 years ago
10.3389/fpsyt.2018.00663
User-Centered App Adaptation of a Low-Intensity E-Mental Health Intervention for Syrian RefugeesCited by: 71
Author(s): Sebastian Burchert, Mohammed Salem Alkneme, Martha Bird, Kenneth Carswell, Pim Cuijpers, Perrnille Hansen, Eva Heim, Melissa Harper Shehadeh, Marit Sijbrandij, Edith Van‘t Hof, Christine Knaevelsrud
Software Mentions: 1
Published: almost 6 years ago
10.1017/gmh.2017.5
Research capacity strengthening in South Asia: based on the experience of South Asian Hub for Advocacy, Research and Education on Mental Health (SHARE)Cited by: 15
Author(s): Megha Sharma, Bushra Razzaque
Software Mentions: 1
Published: almost 8 years ago
10.1186/1752-4458-7-24
Identification, modification, and implementation of an evidence-based psychotherapy for children in a low-income country: the use of TF-CBT in ZambiaCited by: 71
Author(s): Laura Murray, Shannon Dorsey, Stephanie Skavenski, Margaret Kasoma, Mwiya Imasiku, Paul Bolton, Judith K. Bass, Judith A. Cohen
Software Mentions: 1
Published: almost 12 years ago
10.1186/s12913-019-4097-y
Measuring implementation in global mental health: validation of a pragmatic implementation science measure in eastern Ukraine using an experimental vignette designCited by: 24
Author(s): Emily E. Haroz, Paul Bolton, Amanda J. Nguyen, C. Lee, Sergiy Bogdanov, Judith Bass, Namrita S. Singh, S. Benjamin Doty, Laura Murray
Software Mentions: 1
Published: over 5 years ago
10.1186/s13104-021-05786-3
Evaluating context and interest in training in evidence-based mental health care: a qualitative investigation among healthcare providers in Kyiv, UkraineCited by: 4
Author(s): Kimberly Hook, Julia Kozishkurt, Olga Kovalchuk, Evelina Goncharenko, Vitalii Kodovbetskyi, М. С. Опанасенко, Andrii Kopytko, Andriy Girnyk, Kateryna Kliuzko, Mari-Lynn Drainoni, Sergiy Bogdanov
Software Mentions: 1
Published: about 3 years ago
10.1371/journal.pmed.1001757
A Transdiagnostic Community-Based Mental Health Treatment for Comorbid Disorders: Development and Outcomes of a Randomized Controlled Trial among Burmese Refugees in ThailandCited by: 203
Author(s): Paul Bolton, Catherine Lee, Emily E. Haroz, Laura Murray, Shannon Dorsey, Courtland Robinson, Ana M. Ugueto, Judith K. Bass
Software Mentions: 1
Published: about 10 years ago
10.1371/journal.pone.0168340
The Effect of Metformin on Diastolic Function in Patients Presenting with ST-Elevation Myocardial InfarctionCited by: 14
Author(s): Lawien Al Ali, Minke H. T. Hartman, Chris P. H. Lexis, Yoran M. Hummel, Erik Lipšic, Joost P. van Melle, Dirk J. van Veldhuisen, Adriaan A. Voors, Iwan C. C. van der Horst, Pim van der Harst
Software Mentions: 1
Published: almost 8 years ago
10.1371/journal.pone.0215802
Physician activism in American politics: The opposition to the Price nominationCited by: 6
Author(s): Adam Bonica, Howard Rosenthal, David J. Rothman
Software Mentions: 1
Published: over 5 years ago
10.1371/journal.pone.0059425
Elevational Gradient of Vascular Plant Species Richness and Endemism in Crete – The Effect of Post-Isolation Mountain Uplift on a Continental Island SystemCited by: 99
Author(s): Panayiotis Trigas, Maria Panitsa, Spyros Tsiftsis
Software Mentions: 1
Published: over 11 years ago