Data

Tools

Indexes

Applications

Experiments

Papers

cran: robustlmm
Robust Linear Mixed Effects Models
Papers that mentioned: 21
Very Likely Science (100)
pypi: pyplot
Python plotting package
Papers that mentioned: 21
Very Likely Science (75)
pypi: XAS
Papers that mentioned: 21
Very Likely Science (65)
pypi: PyVCF
Variant Call Format (VCF) parser for Python
Papers that mentioned: 21
Very Likely Science (100)
pypi: WASH
Wolfram|Alpha interactive shell
Papers that mentioned: 21
Very Likely Science (65)
cran: curl
A Modern and Flexible Web Client for R
Papers that mentioned: 21
Very Likely Science (83)
bioconductor: M3Drop
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq
Papers that mentioned: 21
Very Likely Science (100)
cran: snow
Simple Network of Workstations
Papers that mentioned: 21
Very Likely Science (93)
pypi: display
simple printer of nested list
Papers that mentioned: 21
Very Likely Science (65)
cran: IDSA
An Interactive Detector for Spatial Associations
Papers that mentioned: 21
Very Likely Science (83)
cran: AEP
Statistical Modelling for Asymmetric Exponential Power Distribution
Papers that mentioned: 21
Very Likely Science (85)
bioconductor: CNAnorm
A normalization method for Copy Number Aberration in cancer samples
Papers that mentioned: 21
Very Likely Science (90)
bioconductor: CNTools
Convert segment data into a region by sample matrix to allow for other high level computational analyses.
Papers that mentioned: 21
Very Likely Science (100)
cran: SPRT
Wald's Sequential Probability Ratio Test
Papers that mentioned: 21
Very Likely Science (75)
pypi: frappe
Frappe placeholder package
Papers that mentioned: 21
Very Likely Science (65)
cran: rfUtilities
Random Forests Model Selection and Performance Evaluation
Papers that mentioned: 21
Very Likely Science (95)
cran: haven
Import and Export 'SPSS', 'Stata' and 'SAS' Files
Papers that mentioned: 21
Very Likely Science (100)
pypi: EAC
Enhanced Autocorrelation
Papers that mentioned: 21
Very Likely Science (75)
pypi: one
Not all nor any. Just the one.
Papers that mentioned: 21
Very Likely Science (65)
cran: ClustOfVar
Clustering of Variables
Papers that mentioned: 21
Very Likely Science (75)
pypi: augustus
A small example package
Papers that mentioned: 21
Very Likely Science (65)
pypi: service
Easy Implementation of Background Services
Papers that mentioned: 21
Very Likely Science (65)
cran: nloptr
R Interface to NLopt
Papers that mentioned: 21
Very Likely Science (100)
pypi: automap
High-performance autoincremented integer-valued mappings.
Papers that mentioned: 21
Very Likely Science (85)
cran: mvMORPH
Multivariate Comparative Tools for Fitting Evolutionary Models to Morphometric Data
Papers that mentioned: 21
Very Likely Science (85)
pypi: pip
The PyPA recommended tool for installing Python packages.
Papers that mentioned: 21
Very Likely Science (65)
cran: hexbin
Hexagonal Binning Routines
Papers that mentioned: 20
Very Likely Science (100)
cran: boa
Bayesian Output Analysis Program (BOA) for MCMC
Papers that mentioned: 20
Very Likely Science (93)
pypi: boa
Integrated suite for beam optics and analysis
Papers that mentioned: 20
Very Likely Science (75)
cran: blmeco
Data Files and Functions Accompanying the Book "Bayesian Data Analysis in Ecology using R, BUGS and Stan"
Papers that mentioned: 20
Very Likely Science (85)
cran: itsadug
Interpreting Time Series and Autocorrelated Data Using GAMMs
Papers that mentioned: 20
Likely Science (50)
pypi: NetView
Network Grapher
Papers that mentioned: 20
Very Likely Science (95)
cran: overlap
Estimates of Coefficient of Overlapping for Animal Activity Patterns
Papers that mentioned: 20
Very Likely Science (75)
pypi: quadprog
Quadratic Programming Solver
Papers that mentioned: 20
Very Likely Science (100)
pypi: RUST
Unit step transformation of Ribo-Seq data
Papers that mentioned: 20
Very Likely Science (100)
pypi: Hummingbird
An API Wrapper for Hummingbird.me
Papers that mentioned: 20
Very Likely Science (65)
cran: RPMM
Recursively Partitioned Mixture Model
Papers that mentioned: 20
Very Likely Science (75)
cran: quadprog
Functions to Solve Quadratic Programming Problems
Papers that mentioned: 20
Very Likely Science (75)
cran: miceadds
Some Additional Multiple Imputation Functions, Especially for 'mice'
Papers that mentioned: 20
Very Likely Science (83)
pypi: argparse
Python command-line parsing library
Papers that mentioned: 20
Very Likely Science (65)
pypi: algorithm
Model an algorithm as a list of functions.
Papers that mentioned: 20
Very Likely Science (75)
pypi: Batman
A deployment toolbelt
Papers that mentioned: 20
Very Likely Science (65)
cran: Gmisc
Descriptive Statistics, Transition Plots, and More
Papers that mentioned: 20
Very Likely Science (85)
cran: corHMM
Hidden Markov Models of Character Evolution
Papers that mentioned: 20
Very Likely Science (83)
cran: relsurv
Relative Survival
Papers that mentioned: 20
Very Likely Science (83)
cran: compareGroups
Descriptive Analysis by Groups
Papers that mentioned: 20
Very Likely Science (85)
cran: EMP
Expected Maximum Profit Classification Performance Measure
Papers that mentioned: 20
Very Likely Science (75)
pypi: cftool
Get inputs and outputs from Codeforces and others online judges
Papers that mentioned: 20
Very Likely Science (65)
pypi: solver
Math problem solver
Papers that mentioned: 20
Very Likely Science (80)
cran: GSE
Robust Estimation in the Presence of Cellwise and Casewise Contamination and Missing Data
Papers that mentioned: 20
Very Likely Science (75)
bioconductor: maanova
Tools for analyzing Micro Array experiments
Papers that mentioned: 20
Very Likely Science (100)
cran: PropCIs
Various Confidence Interval Methods for Proportions
Papers that mentioned: 20
Very Likely Science (75)
cran: EGRET
Exploration and Graphics for RivEr Trends
Papers that mentioned: 20
Very Likely Science (85)
pypi: psychtoolbox
Pieces of Psychtoolbox-3 ported to CPython.
Papers that mentioned: 20
Very Likely Science (65)
pypi: Zorro
Network communication library, with zeromq support
Papers that mentioned: 20
Very Likely Science (75)
cran: apcluster
Affinity Propagation Clustering
Papers that mentioned: 20
Very Likely Science (75)
cran: RHRV
Heart Rate Variability Analysis of ECG Data
Papers that mentioned: 20
Very Likely Science (60)
bioconductor: IPO
Automated Optimization of XCMS Data Processing parameters
Papers that mentioned: 20
Very Likely Science (84)
cran: png
Read and write PNG images
Papers that mentioned: 20
Very Likely Science (75)
cran: DiscriMiner
Tools of the Trade for Discriminant Analysis
Papers that mentioned: 20
Very Likely Science (85)
cran: ADMM
Algorithms using Alternating Direction Method of Multipliers
Papers that mentioned: 20
Very Likely Science (85)
bioconductor: ROTS
Reproducibility-Optimized Test Statistic
Papers that mentioned: 20
Very Likely Science (90)
pypi: overlap
Exact calculation of the overlap volume and area of spheres and mesh elements
Papers that mentioned: 20
Very Likely Science (100)
pypi: fs
Python's filesystem abstraction layer
Papers that mentioned: 20
Very Likely Science (85)
cran: seg
Measuring Spatial Segregation
Papers that mentioned: 20
Very Likely Science (100)
cran: argparse
Command Line Optional and Positional Argument Parser
Papers that mentioned: 20
Very Likely Science (95)
pypi: Lasagne
A lightweight library to build and train neural networks in Theano
Papers that mentioned: 20
Very Likely Science (100)
pypi: openbabel
Python interface to the Open Babel chemistry library
Papers that mentioned: 20
Very Likely Science (90)
pypi: platinum
Frequently used google chrome commands mappings. A User-Agent generator. All for automation.
Papers that mentioned: 20
Likely Science (40)
pypi: labelImg
LabelImg is a graphical image annotation tool and label object bounding boxes in images
Papers that mentioned: 20
Very Likely Science (100)
cran: growthcurver
Simple Metrics to Summarize Growth Curves
Papers that mentioned: 20
Likely Science (58)
cran: ANOM
Analysis of Means
Papers that mentioned: 20
Very Likely Science (100)
pypi: gls
Gaussian Likelihood scoring method.
Papers that mentioned: 20
Very Likely Science (65)
pypi: Differential
a Python script for easy uploading torrents to varies PT sites.
Papers that mentioned: 20
Very Likely Science (65)
pypi: POT
Python Optimal Transport Library
Papers that mentioned: 20
Very Likely Science (100)
cran: TULIP
A Toolbox for Linear Discriminant Analysis with Penalties
Papers that mentioned: 20
Very Likely Science (93)
pypi: pyGenomeTracks
Command-line tool to make beautiful and reproducible genome browser snapshots
Papers that mentioned: 20
Very Likely Science (80)
pypi: recon
Recon is a Trigger-based replacement for RANCID.
Papers that mentioned: 20
Very Likely Science (65)
bioconductor: PCAtools
PCAtools: Everything Principal Components Analysis
Papers that mentioned: 20
Very Likely Science (100)
pypi: NanoStat
Calculate statistics for Oxford Nanopore sequencing data and alignments
Papers that mentioned: 20
Very Likely Science (100)
pypi: SEIR
SEIR modelling of covid19
Papers that mentioned: 20
Very Likely Science (75)
cran: Rmpi
Interface (Wrapper) to MPI (Message-Passing Interface)
Papers that mentioned: 20
Very Likely Science (75)
pypi: diagram
Text mode diagrams using UTF-8 characters and fancy colors
Papers that mentioned: 20
Very Likely Science (65)
pypi: skyline
Papers that mentioned: 20
Unlikely Science (0)
cran: rsm
Response-Surface Analysis
Papers that mentioned: 20
Very Likely Science (93)
cran: cvAUC
Cross-Validated Area Under the ROC Curve Confidence Intervals
Papers that mentioned: 20
Very Likely Science (100)
cran: COCONUT
COmbat CO-Normalization Using conTrols (COCONUT)
Papers that mentioned: 20
Very Likely Science (83)
cran: clustsig
Significant Cluster Analysis
Papers that mentioned: 20
Very Likely Science (85)
bioconductor: SRAdb
A compilation of metadata from NCBI SRA and tools
Papers that mentioned: 20
Very Likely Science (100)
pypi: Flora
Flora
Papers that mentioned: 20
Very Likely Science (65)
pypi: pick
Pick an option in the terminal with a simple GUI
Papers that mentioned: 20
Very Likely Science (65)
bioconductor: MEDME
Modelling Experimental Data from MeDIP Enrichment
Papers that mentioned: 20
Very Likely Science (100)
pypi: bcbio
UNKNOWN
Papers that mentioned: 20
Very Likely Science (65)
cran: diagram
Functions for Visualising Simple Graphs (Networks), Plotting Flow Diagrams
Papers that mentioned: 20
Very Likely Science (85)
pypi: bespoke
Papers that mentioned: 20
Very Likely Science (65)
pypi: dryad
A pipeline to construct reference free core-genome or SNP phylogenetic trees for examining prokaryote relatedness in outbreaks.
Papers that mentioned: 20
Very Likely Science (100)
pypi: hybrid
hybrid tools set
Papers that mentioned: 20
Very Likely Science (65)
cran: Rfit
Rank-Based Estimation for Linear Models
Papers that mentioned: 20
Very Likely Science (85)
pypi: Manifold
An SMF service manifest creation tool.
Papers that mentioned: 20
Very Likely Science (65)
pypi: Chameleon
Fast HTML/XML Template Compiler.
Papers that mentioned: 20
Very Likely Science (65)