Ecosyste.ms: Papers

10.1186/s12864-019-5700-7

RiboStreamR: a web application for quality control, analysis, and visualization of Ribo-seq data
Cited by: 14
Author(s): Patrick Perkins, Serina Mazzoni-Putman, Anna N. Stepanova, José M. Alonso, Steffen Heber
Software Mentions: 13
Published: over 5 years ago

10.12688/f1000research.8964.1

RiboProfiling: a Bioconductor package for standard Ribo-seq pipeline processing
Cited by: 58
Author(s): Alexandra Popa, Kévin Lebrigand, Agnès Paquet, Nicolas Nottet, Karine Robbe-Sermesant, Rainer Waldmann, Pascal Barbry
Software Mentions: 6
Published: over 8 years ago

10.1186/2046-4053-3-27

SAMURAI: Sensitivity analysis of a meta-analysis with unpublished but registered analytical investigations (software)
Cited by: 2
Author(s): Noory Y Kim, Shrikant I. Bangdiwala, Kylie Thaler, Gerald Gartlehner
Software Mentions: 3
Published: over 10 years ago

10.1128/AAC.02356-17

Translation Elongation Factor 4 (LepA) Contributes to Tetracycline Susceptibility by Stalling Elongating Ribosomes
Cited by: 7
Author(s): Bin Liu, Chunlai Chen
Software Mentions: 2
Published: over 6 years ago

10.1371/journal.pntd.0009584

Gut integrity and duodenal enteropathogen burden in undernourished children with environmental enteric dysfunction
Cited by: 4
Author(s): Zehra Jamil, Najeeha Talat Iqbal, Romana Idress, Zubair Ahmed, Kamran Sadiq, Indika Mallawaarachchi, Junaid Iqbal, Sana Syed, Aneeta Hotwani, Furqan Kabir, Kumail Ahmed, Sheraz Ahmed, Fayaz Umrani, Z. Jennie, Fátima Aziz, Adil Kalam, Sean R. Moore, Syed Asad Ali
Software Mentions: 2
Published: over 3 years ago

10.1097/OI9.0000000000000093

Evaluating reliability and validity of the modified radiographic union scale for tibia (mRUST) among North American and Tanzanian surgeons
Cited by: 3
Author(s): Alexander Coburn, David Shearer, Patrick Albright, Sadia Ali, Heather J. Roberts, Billy Haonga, Edmund Eliezer, Kevin Y. Chu, Saam Morshed
Software Mentions: 2
Published: almost 4 years ago

10.1093/bioinformatics/btaa733

CONCUR: quick and robust calculation of codon usage from ribosome profiling data
Cited by: 4
Author(s): Michaela Frye, Susanne Bornelöv
Software Mentions: 2
Published: about 4 years ago

10.1038/s41598-021-94363-6

Classification of ECG signals using multi-cumulants based evolutionary hybrid classifier
Cited by: 7
Author(s): Sahil Dalal, Virendra P. Vishwakarma
Software Mentions: 2
Published: over 3 years ago

10.1371/journal.pgen.1003743

A Novel Actin mRNA Splice Variant Regulates ACTG1 Expression
Cited by: 13
Author(s): Meghan C. Drummond, Karen H. Friderici
Software Mentions: 1
Published: about 11 years ago

10.1371/journal.pone.0185446

High dose teriparatide (rPTH1-34) therapy increases callus volume and enhances radiographic healing at 8-weeks in a massive canine femoral allograft model
Cited by: 4
Author(s): Kohei Nishitani, Zachary Mietus, Christopher A. Beck, Hiromu Ito, Shinya Matsuda, Hani A. Awad, Nicole Ehrhart, Edward M. Schwarz
Software Mentions: 1
Published: about 7 years ago

10.3389/fpls.2018.01165

Genomic Prediction in Tetraploid Ryegrass Using Allele Frequencies Based on Genotyping by Sequencing
Cited by: 29
Author(s): Xiangyu Guo, Fabio Cericola, Dario Fè, Morten Greve Pedersen, Ingo Lenk, Christian S. Jensen, Just Jensen, L.L.G. Janss
Software Mentions: 1
Published: about 6 years ago

10.1186/s13018-018-0917-8

Combination therapy with low-dose teriparatide and zoledronate contributes to fracture healing on rat femoral fracture model
Cited by: 9
Author(s): Yuhta Tsubouchi, Shigeo Ikeda, Masashi Kataoka, Hiroshi Tsumura
Software Mentions: 1
Published: about 6 years ago

10.1371/journal.pcbi.1008842

Full-length ribosome density prediction by a multi-input and multi-output model
Cited by: 2
Author(s): Tingzhong Tian, Shuya Li, Lang Peng, Dan Zhao, Jianyang Zeng
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2199-6-1

Cited by: 26
Author(s): Natacha Dreumont, Antonella Maresca, Jean François Boisclair-Lachance, Anne Bergeron, Robert M. Tanguay
Software Mentions: 1
Published: almost 20 years ago

10.1186/1471-2474-14-70

Radiographic union score for hip substantially improves agreement between surgeons and radiologists
Cited by: 50
Author(s): Mohit Bhandari, Mary M. Chiavaras, Naveen Parasu, Hema Choudur, Olufemi R. Ayeni, Rajesh Chakravertty, Simrit Bains, A. Elisabeth Hak, Sheila Sprague, Brad Petrisor
Software Mentions: 1
Published: over 11 years ago

10.1186/s12917-018-1490-4

Comparison of three imaging modalities used to evaluate bone healing after tibial tuberosity advancement in cranial cruciate ligament-deficient dogs and comparison of the effect of a gelatinous matrix and a demineralized bone matrix mix on bone healing – a pilot study
Cited by: 5
Author(s): Marije Risselada, Mary Winter, Daniel D. Lewis, Emily H. Griffith, Antonio Pozzi
Software Mentions: 1
Published: over 6 years ago

10.1186/1745-6150-5-60

Riboswitches as hormone receptors: hypothetical cytokinin-binding riboswitches in Arabidopsis thaliana
Cited by: 12
Author(s): Jeremy Grojean, Brian P. Downes
Software Mentions: 1
Published: almost 15 years ago

10.1186/s40814-019-0524-4

Study protocol: design and rationale for an exploratory phase II randomized controlled trial to determine optimal vitamin D3 supplementation strategies for acute fracture healing
Cited by: 4
Author(s): Sheila Sprague, Sofia Bzovsky, Daniel Connelly, Lehana Thabane, Jonathan D. Adachi, Gerard P. Slobogean
Software Mentions: 1
Published: almost 5 years ago

10.3390/plants9091182

RUST: A Robust, User-Friendly Script Tool for Rapid Measurement of Rust Disease on Cereal Leaves
Cited by: 5
Author(s): Luis M. Gallego-Sánchez, Francisco José Canales, Gracia Montilla-Bascón, Elena Prats
Software Mentions: 1
Published: about 4 years ago

10.1155/2021/7980602

Functional and Radiological Outcome Analysis of Osteoperiosteal Decortication Flap in Nonunion of Tibia
Cited by: 0
Author(s): Vineet Kumar, Shah Waliullah, Sachin Avasthi, Swagat Mahapatra, Ajai Singh, Shahid Ali
Software Mentions: 1
Published: over 3 years ago