Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.12688/f1000research.8964.1
https://doi.org/10.12688/f1000research.8964.1
RiboProfiling: a Bioconductor package for standard Ribo-seq pipeline processing
Cited by: 58
Author(s): Alexandra Popa, Kévin Lebrigand, Agnès Paquet, Nicolas Nottet, Karine Robbe-Sermesant, Rainer Waldmann, Pascal Barbry
Published: over 8 years ago
Software Mentions 6
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignmentsPapers that mentioned: 134
bioconductor: RiboProfiling
Ribosome Profiling Data Analysis: from BAM to Data Representation and InterpretationPapers that mentioned: 11
bioconductor: riboSeqR
Analysis of sequencing data from ribosome profiling experimentsPapers that mentioned: 7
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file importPapers that mentioned: 138