Ecosyste.ms: Papers

10.1186/s12868-019-0538-0

28th Annual Computational Neuroscience Meeting: CNS*2019
Cited by: 3
Author(s):
Software Mentions: 13
Published: about 5 years ago

10.1186/s12868-020-00593-1

29th Annual Computational Neuroscience Meeting: CNS*2020
Cited by: 1
Author(s):
Software Mentions: 9
Published: almost 4 years ago

10.1186/s13040-017-0150-8

RNA-sequence data normalization through in silico prediction of reference genes: the bacterial response to DNA damage as case study
Cited by: 15
Author(s): Bork A. Berghoff, Torgny Karlsson, Thomas Källman, E. Gerhart H. Wagner, Manfred Grabherr
Software Mentions: 7
Published: about 7 years ago

10.12688/f1000research.6157.2

ViennaNGS: A toolbox for building efficient next- generation sequencing analysis pipelines
Cited by: 21
Author(s): Michael T. Wolfinger, Jörg Fallmann, Florian Eggenhofer, Fabian Amman
Software Mentions: 6
Published: over 9 years ago

10.1186/1471-2105-12-63

BIO::Phylo-phyloinformatic analysis using perl
Cited by: 44
Author(s): Rutger A. Vos, Jason Caravas, Klaas Hartmann, Mark A. Jensen, Chase Miller
Software Mentions: 4
Published: over 13 years ago

10.3389/fninf.2021.666695

Prediction of Neural Diameter From Morphology to Enable Accurate Simulation
Cited by: 0
Author(s): Jonathan D. Reed, Kim T. Blackwell
Software Mentions: 3
Published: over 3 years ago

10.1186/s12859-019-2843-0

The Kendrick modelling platform: language abstractions and tools for epidemiology
Cited by: 6
Author(s): Thi Mai Anh Bui, Nick Papoulias, Serge Stinckwich, Mikal Ziane, Benjamín Roche
Software Mentions: 3
Published: over 5 years ago

10.1007/s13280-015-0706-0

Wildlife in the cloud: A new approach for engaging stakeholders in wildlife management
Cited by: 12
Author(s): Guillaume Chapron
Software Mentions: 3
Published: about 9 years ago

10.3389/fninf.2018.00014

NeuroMatic: An Integrated Open-Source Software Toolkit for Acquisition, Analysis and Simulation of Electrophysiological Data
Cited by: 170
Author(s): Jason S. Rothman, R. Angus Silver
Software Mentions: 2
Published: over 6 years ago

10.1186/1471-2202-16-S1-P169

ROS-MUSIC toolchain for spiking neural network simulations in a robotic environment
Cited by: 1
Author(s): Philipp Weidel, Renato Duarte, Karolína Korvasová, Jenia Jitsev, Abigail Morrison
Software Mentions: 2
Published: almost 9 years ago

10.1371/journal.pone.0236105

Human encroachment, climate change and the loss of our archaeological organic cultural heritage: Accelerated bone deterioration at Ageröd, a revisited Scandinavian Mesolithic key-site in despair
Cited by: 6
Author(s): Adam Boëthius, Mathilda Kjällquist, Ola Magnell, Jan Apel
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0240059

High density genotype storage for plant breeding in the Chado schema of Breedbase
Cited by: 5
Author(s): Nicolás Morales, Guillaume Bauchet, Titima Tantikanjana, Adrian F. Powell, Bryan Ellerbrock, Isaak Y. Tecle, Lukas A. Mueller
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0102601

A Nonlinear Cable Framework for Bidirectional Synaptic Plasticity
Cited by: 1
Author(s): Nicolangelo Iannella, Thomas Lavstsen, Derek Abbott, Shigeru Tanaka
Software Mentions: 2
Published: over 10 years ago

10.1371/journal.pone.0157457

Costs and Benefits of Orthographic Inconsistency in Reading: Evidence from a Cross-Linguistic Comparison
Cited by: 26
Author(s): Chiara Valeria Marinelli, Cristina Romani, Cristina Burani, Victoria A. McGowan, Pierluigi Zoccolotti
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0228091

Module for SWC neuron morphology file validation and correction enabled for high throughput batch processing
Cited by: 6
Author(s): Damien M. O’Halloran
Software Mentions: 2
Published: almost 5 years ago

10.1371/journal.pone.0190723

Stable isotope signatures of large herbivore foraging habitats across Europe
Cited by: 37
Author(s): Emilia Hofman‐Kamińska, Hervé Bocherens, Tomasz Borowik, Dorothée G. Drucker, Rafał Kowalczyk
Software Mentions: 1
Published: almost 7 years ago

10.1371/journal.pone.0206439

Penumbra: A spatially distributed, mechanistic model for simulating ground-level incident solar energy across heterogeneous landscapes
Cited by: 3
Author(s): Jonathan Halama, Robert E. Kennedy, James J. Graham, Robert B. McKane, Bradley Barnhart, Kevin Djang, Paul Bryce Pettus, Allen Brookes, Patrick Wingo
Software Mentions: 1
Published: almost 6 years ago

10.1186/1471-2105-14-255

A multiple-alignment based primer design algorithm for genetically highly variable DNA targets
Cited by: 46
Author(s): Johanna Brodin, Mohan Krishnamoorthy, Gayathri Athreya, Will Fischer, Peter Hraber, Cheryl D. Gleasner, Lance Green, Bette T. Korber, Thomas Leitner
Software Mentions: 1
Published: over 11 years ago

10.1002/ece3.888

Smartphones in ecology and evolution: a guide for the app‐rehensive
Cited by: 100
Author(s): Amber G. F. Teacher, David J. Griffiths, David J. Hodgson, Richard Inger
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pone.0131377

Systematic Review and Meta-Analysis of Human Studies to Support a Quantitative Recommendation for Whole Grain Intake in Relation to Type 2 Diabetes
Cited by: 74
Author(s): Aurélie Chanson-Rollé, Alexandra Meynier, François Aubin, Jenni Lappi, Kaisa Poutanen, Sophie Vinoy, Veronique Braesco
Software Mentions: 1
Published: over 9 years ago

10.21470/1678-9741-2019-0220

Which is the Optimal Frozen Elephant Trunk? A Systematic Review and Meta-Analysis of Outcomes in 2161 Patients Undergoing Thoracic Aortic Aneurysm Surgery Using E-vita OPEN PLUS Hybrid Stent Graft versus ThoraflexTM Hybrid Prosthesis
Cited by: 14
Author(s): Amer Harky, Matthew Fok, Mohamad Bashir
Software Mentions: 1
Published: almost 5 years ago