Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: clustsig

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/clustsig

Significant Cluster Analysis
2 versions
Latest release: almost 11 years ago
0 downloads

Papers Mentioning clustsig 20

Ocean warming affected faunal dynamics of benthic invertebrate assemblages across the Toarcian Oceanic Anoxic Event in the Iberian Basin (Spain)
Cited by: 4
Author(s): Veronica Piazza, Clemens V. Ullmann, Martin Aberhan
Software Mentions: 11
Published: almost 4 years ago

10.1186/s12864-021-07742-8

Triple RNA-Seq characterizes aphid gene expression in response to infection with unequally virulent strains of the endosymbiont Hamiltonella defensa
Cited by: 5
Author(s): Heidi Kaech, Alice B. Dennis, Christoph Vorburger
Software Mentions: 10
Published: over 3 years ago

10.3389/fmicb.2020.00669

Patterns in Microbial Assemblages Exported From the Meltwater of Arctic and Sub-Arctic Glaciers
Cited by: 20
Author(s): Tyler J. Kohler, Petra Vinšová, Lukáš Falteisek, Jakub D. Žárský, Jacob C. Yde, Jade E. Hatton, Jon R. Hawkings, Guillaume Lamarche-Gagnon, Eran Hood, Karen A. Cameron, Marek Stibal
Software Mentions: 7
Published: over 4 years ago

10.3389/fmicb.2020.585943

Understanding Microbial Community Dynamics in Up-Flow Bioreactors to Improve Mitigation Strategies for Oil Souring
Cited by: 5
Author(s): Avishek Dutta, Ben Smith, Thomas Goldman, Leanne Walker, Matthew Streets, Bob Eden, Reinhard Dirmeier, Jeff S. Bowman
Software Mentions: 7
Published: almost 4 years ago

10.3390/microorganisms8111754

Comparison of the Performance and Microbial Community Structure of Two Outdoor Pilot-Scale Photobioreactors Treating Digestate
Cited by: 9
Author(s): Aïda Bani, Katia Parati, Anna Pozzi, Cristina Previtali, Graziella Bongioni, Andrea Pizzera, Elena Ficara, Micol Bellucci
Software Mentions: 6
Published: about 4 years ago

10.7717/peerj.5467

Unveiling community patterns and trophic niches of tropical and temperate ants using an integrative framework of field data, stable isotopes and fatty acids
Cited by: 17
Author(s): Félix Baumgarten Rosumek, Nico Blüthgen, Adrian Brückner, Florian Menzel, Gerhard Gebauer, Michael Heethoff
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0235159

Zooplankton biogeographic boundaries in the California Current System as determined from metabarcoding
Cited by: 13
Author(s): Kathleen J. Pitz, Jinchen Guo, Shannon B. Johnson, Tracy L. Campbell, Haibin Zhang, Robert C. Vrijenhoek, Francisco P. Chávez, Jonathan B. Geller
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0198539

Pink shrimp Farfantepenaeus duorarum spatiotemporal abundance trends along an urban, subtropical shoreline slated for restoration
Cited by: 4
Author(s): Ian C. Zink, Joan A. Browder, Diego Lirman, Joseph E. Serafy
Software Mentions: 6
Published: about 6 years ago

10.1098/rsos.190040

Functional implications of dentition-based morphotypes in piscivorous fishes
Cited by: 26
Author(s): Michalis Mihalitsis, David R. Bellwood
Software Mentions: 5
Published: about 5 years ago

10.7717/peerj.1782

H<sub>2</sub>-saturation of high affinity H<sub>2</sub>-oxidizing bacteria alters the ecological niche of soil microorganisms unevenly among taxonomic groups
Cited by: 24
Author(s): Sarah Piché‐Choquette, Julien Tremblay, Susannah G. Tringe, Philippe Constant
Software Mentions: 5
Published: over 8 years ago

10.1111/1751-7915.12348

Towards the development of multifunctional molecular indicators combining soil biogeochemical and microbiological variables to predict the ecological integrity of silvicultural practices
Cited by: 2
Author(s): Vincent Peck, Liliana Quiza, Jean‐Philippe Buffet, Mondher Khdhiri, Audrey‐Anne Durand, Alain Paquette, Nelson Thiffault, Christian Messier, Nadyre Beaulieu, Claude Guertin, Philippe Constant
Software Mentions: 5
Published: almost 9 years ago

10.1371/journal.pone.0130931

Towards an Understanding of the Interactions between Freshwater Inflows and Phytoplankton Communities in a Subtropical Estuary in the Gulf of Mexico
Cited by: 48
Author(s): Samuel Dorado, Tyra Booe, Jamie L. Steichen, Alison McInnes, Rachel Windham, Alicia K. Shepard, A. Lucchese, H. Preischel, James L. Pinckney, Stephen E. Davis, Daniel L. Roelke, Antonietta Quigg
Software Mentions: 3
Published: over 9 years ago

10.1038/s41598-020-68460-x

Biomass addition alters community assembly in ultrafiltration membrane biofilms
Cited by: 2
Author(s): Marisa O.D. Silva, Jakob Pernthaler
Software Mentions: 3
Published: over 4 years ago

10.7717/peerj.1491

Metagenomic and satellite analyses of red snow in the Russian Arctic
Cited by: 27
Author(s): Nao Hisakawa, Steven D. Quistad, Eric R. Hester, Daria Martynova, Heather Maughan, Enric Sala, Maria Gavrilo, Forest Rohwer
Software Mentions: 3
Published: almost 9 years ago

10.3389/fgene.2020.612256

Regulatory Dynamics of Cell Differentiation Revealed by True Time Series From Multinucleate Single Cells
Cited by: 2
Author(s): Anna Pretschner, Sophie Pabel, Markus Haas, Monika Heiner, Wolfgang Marwan
Software Mentions: 2
Published: almost 4 years ago

10.1371/journal.pone.0235336

Community structure of actively growing bacteria in a coastal fish-farming area
Cited by: 5
Author(s): Akito Taniguchi, M. Eguchi
Software Mentions: 2
Published: over 4 years ago

10.3389/fmicb.2019.00843

Source Community and Assembly Processes Affect the Efficiency of Microbial Microcystin Degradation on Drinking Water Filtration Membranes
Cited by: 4
Author(s): Marisa O.D. Silva, Peter Desmond, Nicolas Derlon, Eberhard Morgenroth, Jakob Pernthaler
Software Mentions: 2
Published: over 5 years ago

10.1016/j.dib.2019.104213

Data on taxonomic annotation and diversity of 18S rRNA gene amplicon libraries derived from high throughput sequencing
Cited by: 1
Author(s): Takafumi Kataoka, Ryou Kondo
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0170683

Evidence of a Shift in the Littoral Fish Community of the Sacramento-San Joaquin Delta
Cited by: 16
Author(s): Brian Mahardja, Mary Jade Farruggia, Brian M. Schreier, Ted Sommer
Software Mentions: 2
Published: almost 8 years ago

10.1002/ece3.6138

Decoding diversity in a coral reef fish species complex with restricted range using metagenomic sequencing of gut contents
Cited by: 2
Author(s): Beverly J. French, Yan Wei Lim, Brian J. Zgliczynski, Robert A. Edwards, Forest Rohwer, Stuart A. Sandin
Software Mentions: 2
Published: over 4 years ago