Data

Tools

Indexes

Applications

Experiments

Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s12864-021-07742-8

https://doi.org/10.1186/s12864-021-07742-8

Triple RNA-Seq characterizes aphid gene expression in response to infection with unequally virulent strains of the endosymbiont Hamiltonella defensa

Cited by: 5
Author(s): Heidi Kaech, Alice B. Dennis, Christoph Vorburger
Published: about 4 years ago

Software Mentions 10

bioconductor: pcaExplorer
Interactive Visualization of RNA-seq Data Using a Principal Components Approach
Papers that mentioned: 26
Very Likely Science (100)
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
Very Likely Science (100)
cran: cluster
"Finding Groups in Data": Cluster Analysis Extended Rousseeuw et al.
Papers that mentioned: 416
Very Likely Science (85)
cran: clustsig
Significant Cluster Analysis
Papers that mentioned: 20
Very Likely Science (85)
cran: flashClust
Implementation of optimal hierarchical clustering
Papers that mentioned: 74
Very Likely Science (75)
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
Very Likely Science (100)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
Very Likely Science (65)
pypi: cluster
Simple clustering library for python.
Papers that mentioned: 416
Very Likely Science (80)
pypi: diamond
Smart data producer for graphite graphing package
Papers that mentioned: 68
Very Likely Science (100)