Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: hexbin

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/hexbin

Hexagonal Binning Routines
17 versions
Latest release: over 1 year ago
62 dependent packages
46,456 downloads last month

Papers Mentioning hexbin 20

10.1371/journal.pcbi.1007912

bigPint: A Bioconductor visualization package that makes big data pint-sized
Cited by: 3
Author(s): Lindsay Rutter, Dianne Cook
Software Mentions: 47
Published: over 4 years ago

10.7717/peerj.5794

beadplexr: reproducible and automated analysis of multiplex bead assays
Cited by: 4
Author(s): Ulrik Stervbo, Timm H. Westhoff, Nina Babel
Software Mentions: 20
Published: about 6 years ago

10.3390/genes12030413

Spt4 Promotes Pol I Processivity and Transcription Elongation
Cited by: 5
Author(s): Abigail K. Huffines, Yvonne J. K. Edwards, David A. Schneider
Software Mentions: 18
Published: over 3 years ago

Systematic analysis of 18F-FDG PET and metabolism, proliferation and hypoxia markers for classification of head and neck tumors
Cited by: 21
Author(s): Bianca A.W. Hoeben, Maud H.W. Starmans, Ralph T.H. Leijenaar, Ludwig Dubois, Albert J. van der Kogel, J.H.A.M. Kaanders, Paul C. Boutros, Johan Bussink
Software Mentions: 9
Published: over 10 years ago

10.3389/fgene.2021.745284

Genetic Variations and Differential DNA Methylation to Face Contrasted Climates in Small Ruminants: An Analysis on Traditionally-Managed Sheep and Goats
Cited by: 2
Author(s): Laure Denoyelle, Pierre de Villemereuil, Frédéric Boyer, Meidhi Khelifi, Clément Gaffet, Florian J. Alberto, Badr Benjelloun, François Pompanon
Software Mentions: 6
Published: about 3 years ago

10.1186/1471-2105-7-467

Goulphar: rapid access and expertise for standard two-color microarray normalization methods
Cited by: 55
Author(s): Sophie Lemoine, Florence Combes, Nicolas Servant, Stéphane Le Crom
Software Mentions: 6
Published: about 18 years ago

10.12688/f1000research.10411.2

A Bioconductor workflow for processing and analysing spatial proteomics data
Cited by: 23
Author(s): Lisa M. Breckels, Claire M. Mulvey, Kathryn S. Lilley, Laurent Gatto
Software Mentions: 5
Published: over 6 years ago

10.1016/j.celrep.2018.04.047

Influenza Virus Mounts a Two-Pronged Attack on Host RNA Polymerase II Transcription
Cited by: 68
Author(s): David L.V. Bauer, Michael Tellier, Maira Martínez-Alonso, Takayuki Nojima, Nick J. Proudfoot, Shona Murphy, Ervin Fodor
Software Mentions: 5
Published: over 6 years ago

10.1186/s12865-014-0040-5

Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice
Cited by: 53
Author(s): Victor Greiff, Ulrike Menzel, Ulrike Haessler, Skylar C. Cook, Simon Friedensohn, Tarik A. Khan, Mark Pogson, Ina Hellmann, Sai T. Reddy
Software Mentions: 4
Published: about 10 years ago

10.1186/gb-2010-11-3-r29

Genome-wide functional analysis of human 5' untranslated region introns
Cited by: 69
Author(s): Can Cenik, Adnan Derti, Joseph Mellor, Gabriel F. Berriz, Frederick P. Roth
Software Mentions: 4
Published: almost 15 years ago

10.1371/journal.pone.0096727

Comprehensive Evaluation and Optimization of Amplicon Library Preparation Methods for High-Throughput Antibody Sequencing
Cited by: 53
Author(s): Ulrike Menzel, Victor Greiff, Tarik A. Khan, Ulrike Haessler, Ina Hellmann, Simon Friedensohn, Skylar C. Cook, Mark Pogson, Sai T. Reddy
Software Mentions: 3
Published: over 10 years ago

10.1186/1471-2105-11-S9-S6

Comparison of multiplex meta analysis techniques for understanding the acute rejection of solid organ transplants
Cited by: 21
Author(s): Alexander A. Morgan, Purvesh Khatri, Richard H. Jones, Minnie M. Sarwal, Atul J. Butte
Software Mentions: 3
Published: about 14 years ago

10.1371/journal.pone.0154181

Incorporating Non-Coding Annotations into Rare Variant Analysis
Cited by: 9
Author(s): Tom G Richardson, Colin Campbell, Nicholas J. Timpson, Tom R. Gaunt
Software Mentions: 3
Published: over 8 years ago

10.1038/srep17328

Genome-wide DNA methylation map of human neutrophils reveals widespread inter-individual epigenetic variation
Cited by: 54
Author(s): Aniruddha Chatterjee, Peter A. Stockwell, Euan J. Rodger, Elizabeth J. Duncan, Matthew Parry, Robert J. Weeks, Ian M. Morison
Software Mentions: 3
Published: almost 9 years ago

10.1371/journal.pone.0140462

Validation of Pooled Whole-Genome Re-Sequencing in Arabidopsis lyrata
Cited by: 41
Author(s): Marco Fracassetti, Philippa C. Griffin, Yvonne Willi
Software Mentions: 3
Published: about 9 years ago

10.1093/sysbio/syx070

Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats
Cited by: 48
Author(s): Roy N. Platt, Brant C. Faircloth, Kevin A. Sullivan, Troy J. Kieran, Michael W. Vandewege, Thomas E. Lee, Robert J. Baker, Richard D. Stevens, David A. Ray
Software Mentions: 2
Published: about 7 years ago

10.1186/1471-2164-15-1021

Using multi-way admixture mapping to elucidate TB susceptibility in the South African Coloured population
Cited by: 31
Author(s): Michelle Daya, Lize van der Merwe, Christopher R. Gignoux, Paul D. van Helden, Marlo Möller, Eileen G. Hoal
Software Mentions: 2
Published: almost 10 years ago